Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 4.1e-218 761.1 393 100.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 6.7e-19 99.4 56 85.7
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 6.2e-17 92.8 56 76.8
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 8.1e-17 92.4 55 78.2
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 1.4e-16 91.7 56 75.0
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 1.4e-16 91.7 56 75.0
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 1.8e-16 91.3 56 76.8
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.8e-16 91.3 46 91.3
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 2.4e-16 90.9 61 70.5
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 5.3e-16 89.7 56 71.4
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 6.9e-16 89.4 55 72.7
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 6.9e-16 89.4 55 72.7
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.9e-16 89.4 46 87.0
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.9e-16 89.4 46 87.0
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 9.0e-16 89.0 55 72.7
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 9.0e-16 89.0 55 72.7
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 2.6e-15 87.4 55 70.9
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 2.6e-15 87.4 46 84.8
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 2.6e-15 87.4 55 72.7
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 3.4e-15 87.0 46 82.6
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 3.4e-15 87.0 55 70.9
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 3.4e-15 87.0 54 72.2
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 5.8e-15 86.3 55 70.9
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.8e-15 86.3 55 70.9
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.8e-15 86.3 55 70.9
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 9.9e-15 85.5 46 82.6
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 9.9e-15 85.5 56 71.4
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.3e-14 85.1 51 76.5
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.3e-14 85.1 55 70.9
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.7e-14 84.7 55 69.1
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 2.2e-14 84.3 51 76.5
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 2.2e-14 84.3 47 83.0
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.2e-14 84.3 55 69.1
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 2.2e-14 84.3 53 73.6
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 2.9e-14 84.0 55 70.9
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 3.8e-14 83.6 52 69.2
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 4.9e-14 83.2 56 67.9
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 4.9e-14 83.2 46 78.3
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 4.9e-14 83.2 56 69.6
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 4.9e-14 83.2 55 67.3
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 8.4e-14 82.4 56 69.6
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 8.4e-14 82.4 56 69.6
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 8.4e-14 82.4 55 67.3
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 8.4e-14 82.4 183 37.2
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.1e-13 82.0 55 67.3
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 1.1e-13 82.0 51 72.5
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 1.1e-13 82.0 56 66.1
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 1.4e-13 81.6 46 78.3
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 1.9e-13 81.3 46 78.3
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.9e-13 81.3 46 78.3
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 2.4e-13 80.9 51 72.5
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 3.2e-13 80.5 55 67.3
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 3.2e-13 80.5 55 63.6
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.2e-13 80.5 49 73.5
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 3.2e-13 80.5 51 72.5
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 4.2e-13 80.1 46 76.1
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 5.5e-13 79.7 45 75.6
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 7.1e-13 79.3 52 65.4
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 7.1e-13 79.3 51 70.6
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 9.3e-13 79.0 50 72.0
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 1.2e-12 78.6 46 71.7
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 1.2e-12 78.6 55 65.5
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.2e-12 78.6 94 47.9
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.6e-12 78.2 53 64.2
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 1.6e-12 78.2 45 73.3
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 2.1e-12 77.8 52 65.4
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 2.1e-12 77.8 41 78.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.7e-12 77.4 41 85.4
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 2.7e-12 77.4 56 64.3
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 2.7e-12 77.4 56 64.3
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 3.5e-12 77.0 57 64.9
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 4.6e-12 76.6 57 63.2
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 4.6e-12 76.6 46 76.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 4.6e-12 76.6 45 71.1
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 6.0e-12 76.3 52 65.4
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 6.0e-12 76.3 52 65.4
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 6.0e-12 76.3 54 63.0
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 7.9e-12 75.9 47 72.3
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 1.0e-11 75.5 55 63.6
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.3e-11 75.1 52 63.5
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 2.3e-11 74.3 55 60.0
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 2.3e-11 74.3 52 63.5
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.0e-11 73.9 52 61.5
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 3.9e-11 73.6 52 61.5
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 3.9e-11 73.6 52 61.5
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 3.9e-11 73.6 52 61.5
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 3.9e-11 73.6 55 63.6
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 5.1e-11 73.2 49 65.3
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 5.1e-11 73.2 49 67.3
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 8.7e-11 72.4 52 59.6
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 8.7e-11 72.4 52 59.6
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 8.7e-11 72.4 52 59.6
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 8.7e-11 72.4 52 59.6
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.1e-10 72.0 126 40.5
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.1e-10 72.0 41 75.6
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.1e-10 72.0 41 75.6
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.5e-10 71.6 46 67.4
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 9.6e-10 68.9 46 60.9
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 2.1e-09 67.8 44 63.6
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.1e-08 65.5 60 53.3
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 5.3e-08 63.2 45 57.8
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.2e-07 62.0 35 80.0


User provided reference genes

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