Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21319 Corylus avellana HOM05D002874 ORTHO05D003250 2.6e-112 408.7 203 100.0
Haze_21322 Corylus avellana HOM05D002874 ORTHO05D003250 2.3e-63 246.1 203 70.4
Haze_21316 Corylus avellana HOM05D002874 ORTHO05D003250 5.5e-33 145.2 209 48.3
Cfa012972 Carpinus fangiana HOM05D002874 ORTHO05D003250 2.1e-24 116.7 201 44.3
Sabra19G0089700 Salix brachista HOM05D002874 ORTHO05D003250 2.6e-19 99.8 201 37.3
CiPaw.08G003100 Carya illinoinensis HOM05D002874 ORTHO05D003250 1.0e-18 97.8 201 37.8
TWI59G0939 Tripterygium wilfordii HOM05D002874 ORTHO05D003250 1.0e-18 97.8 200 38.0
Potri.013G105400 Populus trichocarpa HOM05D002874 ORTHO05D003250 3.8e-18 95.9 201 37.3
Manes.18G106200 Manihot esculenta HOM05D002874 ORTHO05D003250 1.9e-17 93.6 201 38.3
Potri.019G078800 Populus trichocarpa HOM05D002874 ORTHO05D003250 4.2e-17 92.4 201 34.8
Cpa.g.sc66.5 Carica papaya HOM05D002874 ORTHO05D003250 2.7e-16 89.7 55 80.0
Atru.chr13.2374 Acer truncatum HOM05D002874 ORTHO05D003250 4.6e-16 89.0 200 35.5
arahy.Tifrunner.gnm1.ann1.3TL6MN Arachis hypogaea HOM05D002874 ORTHO05D003250 7.9e-16 88.2 56 82.1
arahy.Tifrunner.gnm1.ann1.ULYQ5U Arachis hypogaea HOM05D002874 ORTHO05D003250 7.9e-16 88.2 56 82.1
THA.LOC104809729 Tarenaya hassleriana HOM05D002874 ORTHO05D003250 7.9e-16 88.2 56 80.4
Sabra13G0091100 Salix brachista HOM05D002874 ORTHO05D003250 1.0e-15 87.8 56 78.6
AT1G22510 Arabidopsis thaliana HOM05D002874 ORTHO05D003250 1.8e-15 87.0 56 75.0
Lj3g0022874 Lotus japonicus HOM05D002874 ORTHO05D003250 1.8e-15 87.0 56 76.8
THA.LOC104800136 Tarenaya hassleriana HOM05D002874 ORTHO05D003250 2.3e-15 86.7 56 80.4
Carub.0001s2204 Capsella rubella HOM05D002874 ORTHO05D003250 3.0e-15 86.3 66 69.7
Lalb_Chr15g0080121 Lupinus albus HOM05D002874 ORTHO05D003250 3.0e-15 86.3 56 78.6
Psat1g008160 Pisum sativum HOM05D002874 ORTHO05D003250 3.0e-15 86.3 56 78.6
AL1G36050 Arabidopsis lyrata HOM05D002874 ORTHO05D003250 3.9e-15 85.9 56 75.0
A07p38290 Brassica napus HOM05D002874 ORTHO05D003250 3.9e-15 85.9 56 80.4
BraA07t31393Z Brassica rapa HOM05D002874 ORTHO05D003250 3.9e-15 85.9 56 80.4
CARHR065030 Cardamine hirsuta HOM05D002874 ORTHO05D003250 3.9e-15 85.9 66 72.7
Thhalv10019196m.g Eutrema salsugineum HOM05D002874 ORTHO05D003250 3.9e-15 85.9 56 80.4
Sp5g27260 Schrenkiella parvula HOM05D002874 ORTHO05D003250 3.9e-15 85.9 56 80.4
AL2G31840 Arabidopsis lyrata HOM05D002874 ORTHO05D003250 5.1e-15 85.5 56 78.6
AT1G72175 Arabidopsis thaliana HOM05D002874 ORTHO05D003250 5.1e-15 85.5 56 78.6
BcaB05g24721 Brassica carinata HOM05D002874 ORTHO05D003250 5.1e-15 85.5 56 78.6
CARHR022860 Cardamine hirsuta HOM05D002874 ORTHO05D003250 5.1e-15 85.5 56 75.0
TPR.G25522 Trifolium pratense HOM05D002874 ORTHO05D003250 5.1e-15 85.5 56 76.8
FAN07G2383 Fragaria x ananassa HOM05D002874 ORTHO05D003250 8.8e-15 84.7 202 34.7
FAN08G3034 Fragaria x ananassa HOM05D002874 ORTHO05D003250 8.8e-15 84.7 202 34.7
Medtr3g005800 Medicago truncatula HOM05D002874 ORTHO05D003250 8.8e-15 84.7 56 75.0
BcaC08g46664 Brassica carinata HOM05D002874 ORTHO05D003250 1.1e-14 84.3 56 78.6
C06p46350 Brassica napus HOM05D002874 ORTHO05D003250 1.1e-14 84.3 56 78.6
Aa31LG4G8390 Aethionema arabicum HOM05D002874 ORTHO05D003250 1.5e-14 84.0 56 76.8
CANSAT56G0379 Cannabis sativa HOM05D002874 ORTHO05D003250 1.5e-14 84.0 55 76.4
CANSAT56G0446 Cannabis sativa HOM05D002874 ORTHO05D003250 1.5e-14 84.0 55 76.4
FvH4_5g31590 Fragaria vesca HOM05D002874 ORTHO05D003250 1.5e-14 84.0 202 35.1
TAR628G0883 Trochodendron aralioides HOM05D002874 ORTHO05D003250 1.5e-14 84.0 56 75.0
BolC6t39680H Brassica oleracea HOM05D002874 ORTHO05D003250 2.0e-14 83.6 56 78.6
Duzib211G0598 Durio zibethinus HOM05D002874 ORTHO05D003250 2.5e-14 83.2 55 78.2
COL.COLO4_24649 Corchorus olitorius HOM05D002874 ORTHO05D003250 3.3e-14 82.8 55 80.0
Duzib116G0473 Durio zibethinus HOM05D002874 ORTHO05D003250 3.3e-14 82.8 55 78.2
Thhalv10008870m.g Eutrema salsugineum HOM05D002874 ORTHO05D003250 3.3e-14 82.8 55 72.7
FAN18G1812 Fragaria x ananassa HOM05D002874 ORTHO05D003250 4.3e-14 82.4 201 33.8
CiPaw.07G235400 Carya illinoinensis HOM05D002874 ORTHO05D003250 5.7e-14 82.0 56 80.4
Gohir.A05G251600 Gossypium hirsutum HOM05D002874 ORTHO05D003250 5.7e-14 82.0 56 75.0
Thecc.08G192600 Theobroma cacao HOM05D002874 ORTHO05D003250 5.7e-14 82.0 55 78.2
Aqoxy6G00106 Aquilegia oxysepala HOM05D002874 ORTHO05D003250 7.4e-14 81.6 56 73.2
Carub.0002s1898 Capsella rubella HOM05D002874 ORTHO05D003250 7.4e-14 81.6 56 76.8
Gohir.D05G252200 Gossypium hirsutum HOM05D002874 ORTHO05D003250 7.4e-14 81.6 56 73.2
Gorai.009G265000 Gossypium raimondii HOM05D002874 ORTHO05D003250 7.4e-14 81.6 56 73.2
Nn1g08358 Nelumbo nucifera HOM05D002874 ORTHO05D003250 9.7e-14 81.3 56 73.2
BcaB03g14199 Brassica carinata HOM05D002874 ORTHO05D003250 1.3e-13 80.9 55 72.7
DCAR_017446 Daucus carota HOM05D002874 ORTHO05D003250 1.3e-13 80.9 55 72.7
Hund16773 Selenicereus undatus HOM05D002874 ORTHO05D003250 1.3e-13 80.9 55 76.4
PSO170G2830 Papaver somniferum HOM05D002874 ORTHO05D003250 1.7e-13 80.5 56 71.4
PSO782G4577 Papaver somniferum HOM05D002874 ORTHO05D003250 1.7e-13 80.5 54 74.1
BcaC06g34971 Brassica carinata HOM05D002874 ORTHO05D003250 2.2e-13 80.1 55 67.3
A07p14340 Brassica napus HOM05D002874 ORTHO05D003250 2.2e-13 80.1 55 67.3
C07p21110 Brassica napus HOM05D002874 ORTHO05D003250 2.2e-13 80.1 55 67.3
BolC7t42639H Brassica oleracea HOM05D002874 ORTHO05D003250 2.2e-13 80.1 55 67.3
vmacro00978 Vaccinium macrocarpon HOM05D002874 ORTHO05D003250 2.2e-13 80.1 55 72.7
CSS0018795 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 2.8e-13 79.7 56 73.2
CSS0020391 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 2.8e-13 79.7 56 73.2
PGR083G2530 Punica granatum HOM05D002874 ORTHO05D003250 2.8e-13 79.7 56 73.2
Ciclev10002598m.g Citrus clementina HOM05D002874 ORTHO05D003250 3.7e-13 79.3 56 73.2
MD08G1217700 Malus domestica HOM05D002874 ORTHO05D003250 3.7e-13 79.3 201 32.8
Nitab4.5_0001463g0040 Nicotiana tabacum HOM05D002874 ORTHO05D003250 3.7e-13 79.3 55 72.7
Cc10_g09520 Coffea canephora HOM05D002874 ORTHO05D003250 4.8e-13 79.0 54 72.2
Nitab4.5_0005616g0060 Nicotiana tabacum HOM05D002874 ORTHO05D003250 6.3e-13 78.6 66 62.1
Rhsim12G0006100 Rhododendron simsii HOM05D002874 ORTHO05D003250 6.3e-13 78.6 66 63.6
Sc01g0002000 Simmondsia chinensis HOM05D002874 ORTHO05D003250 8.2e-13 78.2 56 73.2
Migut.C01326 Erythranthe guttata HOM05D002874 ORTHO05D003250 1.4e-12 77.4 66 60.6
RcHm_v2.0_Chr7g0227111 Rosa chinensis HOM05D002874 ORTHO05D003250 1.4e-12 77.4 65 66.2
Eucgr.F04113 Eucalyptus grandis HOM05D002874 ORTHO05D003250 1.8e-12 77.0 66 62.1
Solyc11g027810.3 Solanum lycopersicum HOM05D002874 ORTHO05D003250 1.8e-12 77.0 66 62.1
Ah.05g178590 Amaranthus hybridus HOM05D002874 ORTHO05D003250 2.4e-12 76.6 53 67.9
BcaC08g45227 Brassica carinata HOM05D002874 ORTHO05D003250 4.1e-12 75.9 52 69.2
Hma1.2p1_0004F.1_g004110 Hydrangea macrophylla HOM05D002874 ORTHO05D003250 5.3e-12 75.5 54 72.2
CAN.G2.32 Capsicum annuum HOM05D002874 ORTHO05D003250 6.9e-12 75.1 66 59.1
CsaV3_6G002730 Cucumis sativus L. HOM05D002874 ORTHO05D003250 6.9e-12 75.1 56 64.3
HPP92_003141 Vanilla planifolia HOM05D002874 ORTHO05D003250 9.1e-12 74.7 54 66.7
Oeu059197.1 Olea europaea HOM05D002874 ORTHO05D003250 1.5e-11 73.9 53 67.9
PGSC0003DMG400026730 Solanum tuberosum HOM05D002874 ORTHO05D003250 1.5e-11 73.9 66 57.6
GSVIVG01026089001 Vitis vinifera HOM05D002874 ORTHO05D003250 2.6e-11 73.2 54 66.7
VMungo1080G0651 Vigna mungo HOM05D002874 ORTHO05D003250 4.5e-11 72.4 52 73.1
MD15G1405300 Malus domestica HOM05D002874 ORTHO05D003250 7.7e-11 71.6 56 66.1
MSTRG.25476 Avicennia marina HOM05D002874 ORTHO05D003250 1.0e-10 71.2 54 66.7
ClCG08G002480 Citrullus lanatus HOM05D002874 ORTHO05D003250 1.0e-10 71.2 52 67.3
Glyma.04G255000 Glycine max HOM05D002874 ORTHO05D003250 1.0e-10 71.2 55 69.1
AUR62004599 Chenopodium quinoa HOM05D002874 ORTHO05D003250 1.3e-10 70.9 49 67.3
AUR62023545 Chenopodium quinoa HOM05D002874 ORTHO05D003250 1.7e-10 70.5 49 67.3
unitig_37.g13102 Utricularia gibba HOM05D002874 ORTHO05D003250 2.9e-10 69.7 54 57.4
ATR0709G075 Amborella trichopoda HOM05D002874 ORTHO05D003250 3.8e-10 69.3 55 58.2
SGA_v2.0_scaffold24G10609 Striga asiatica HOM05D002874 ORTHO05D003250 3.8e-10 69.3 64 53.1
Sed0010548 Sechium edule HOM05D002874 ORTHO05D003250 5.0e-10 68.9 56 64.3
SEGI_08350 Sequoiadendron giganteum HOM05D002874 ORTHO05D003250 6.5e-10 68.6 56 64.3
HanXRQChr02g0036891 Helianthus annuus HOM05D002874 ORTHO05D003250 8.5e-10 68.2 65 50.8
MBI17_g21478_MAGBIO Magnolia biondii HOM05D002874 ORTHO05D003250 8.5e-10 68.2 53 58.5
Os03g0839000 Oryza sativa ssp. japonica HOM05D002874 ORTHO05D003250 1.1e-09 67.8 51 58.8
ECA247G4052 Erigeron canadensis HOM05D002874 ORTHO05D003250 1.4e-09 67.4 65 50.8
HanXRQChr04g0101991 Helianthus annuus HOM05D002874 ORTHO05D003250 2.5e-09 66.6 65 53.8
MSTRG.1570 Avicennia marina HOM05D002874 ORTHO05D003250 3.2e-09 66.2 56 57.1
Pp3c4_27320 Physcomitrium patens HOM05D002874 ORTHO05D003250 3.2e-09 66.2 53 54.7
AagrBONN_evm.TU.Sc2ySwM_362.905 Anthoceros agrestis HOM05D002874 ORTHO05D003250 1.6e-08 63.9 63 50.8
Mapoly0062s0090 Marchantia polymorpha HOM05D002874 ORTHO05D003250 1.6e-08 63.9 53 56.6
BcaB03g14961 Brassica carinata HOM05D002874 ORTHO05D003250 2.7e-08 63.2 56 67.9
Prupe.1G555800 Prunus persica HOM05D002874 ORTHO05D003250 6.1e-08 62.0 56 51.8
Lsat_1_v5_gn_1_25761 Lactuca sativa HOM05D002874 ORTHO05D003250 2.3e-07 60.1 47 57.4
BcaB02g07327 Brassica carinata HOM05D002874 ORTHO05D003250 6.7e-07 58.5 54 53.7
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 1.1e-06 57.8 28 92.9


User provided reference genes

Program Settings