Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 1.8e-136 489.6 311 100.0
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 3.1e-120 435.6 291 96.6
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 2.8e-81 306.2 295 76.3
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 2.9e-78 296.2 290 71.4
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 5.7e-74 282.0 270 78.9
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 5.5e-69 265.4 297 68.0
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 1.0e-67 261.2 295 67.1
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 4.4e-66 255.8 295 67.8
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 5.4e-64 248.8 305 63.9
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 2.7e-63 246.5 309 62.8
Thecc.05G236800 Theobroma cacao HOM05D001562 ORTHO05D001437 8.9e-59 231.5 291 65.6
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 2.0e-58 230.3 297 64.0
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 4.4e-58 229.2 318 59.4
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 1.3e-57 227.6 301 63.8
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 2.2e-57 226.9 320 58.8
COL.COLO4_33469 Corchorus olitorius HOM05D001562 ORTHO05D001437 2.9e-57 226.5 300 63.0
Duzib106G1733 Durio zibethinus HOM05D001562 ORTHO05D001437 6.4e-57 225.3 300 59.3
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 2.3e-54 216.9 294 60.9
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 9.5e-53 211.5 292 60.3
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 2.8e-52 209.9 292 59.2
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 2.3e-51 206.8 279 58.8
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 3.4e-50 203.0 297 57.9
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 4.4e-50 202.6 292 59.6
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 2.9e-49 199.9 296 54.1
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 5.4e-48 195.7 300 56.7
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 1.2e-47 194.5 301 57.5
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 1.6e-47 194.1 296 55.7
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 2.1e-47 193.7 296 59.1
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 2.7e-47 193.4 296 53.4
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 5.1e-46 189.1 296 54.4
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 1.1e-45 188.0 296 51.0
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 7.3e-45 185.3 297 53.2
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 8.1e-44 181.8 297 51.9
Sed0010319 Sechium edule HOM05D001562 ORTHO05D001437 1.4e-43 181.0 284 60.9
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 3.1e-43 179.9 295 52.9
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 3.1e-43 179.9 295 52.9
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 4.0e-43 179.5 303 54.5
Lalb_Chr14g0365071 Lupinus albus HOM05D001562 ORTHO05D001437 1.5e-42 177.6 297 50.2
DCAR_013503 Daucus carota HOM05D001562 ORTHO05D001437 4.4e-42 176.0 308 54.2
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 2.2e-41 173.7 297 57.6
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 2.9e-41 173.3 293 51.2
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 8.3e-41 171.8 293 50.9
Medtr6g027180 Medicago truncatula HOM05D001562 ORTHO05D001437 1.9e-40 170.6 299 54.5
FvH4_1g29400 Fragaria vesca HOM05D001562 ORTHO05D001437 2.4e-40 170.2 293 55.3
FAN19G2359 Fragaria x ananassa HOM05D001562 ORTHO05D001437 2.4e-40 170.2 293 55.3
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 4.1e-40 169.5 302 54.3
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 7.1e-40 168.7 298 49.0
Phvul.001G102901 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 1.2e-39 167.9 298 51.0
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 1.6e-39 167.5 301 53.2
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 3.5e-39 166.4 311 51.8
DCAR_016950 Daucus carota HOM05D001562 ORTHO05D001437 2.3e-38 163.7 291 48.1
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 2.3e-38 163.7 216 51.9
Psat3g084560 Pisum sativum HOM05D001562 ORTHO05D001437 3.0e-38 163.3 296 50.0
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 6.6e-38 162.2 302 48.7
FAN26G1485 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.2e-36 157.9 288 53.8
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.6e-36 157.5 287 54.4
Glyma.19G121100 Glycine max HOM05D001562 ORTHO05D001437 6.2e-36 155.6 294 51.7
TPR.G20663 Trifolium pratense HOM05D001562 ORTHO05D001437 8.1e-36 155.2 294 49.3
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 2.4e-35 153.7 315 51.7
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 8.9e-35 151.8 303 52.1
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 1.5e-34 151.0 314 48.4
FAN23G1244 Fragaria x ananassa HOM05D001562 ORTHO05D001437 2.6e-34 150.2 281 54.1
TPR.G33954 Trifolium pratense HOM05D001562 ORTHO05D001437 3.4e-34 149.8 312 43.9
Lj1g0001304 Lotus japonicus HOM05D001562 ORTHO05D001437 1.4e-32 144.4 299 48.5
FAN28G2700 Fragaria x ananassa HOM05D001562 ORTHO05D001437 3.2e-32 143.3 261 56.7
Ca_03432_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 2.7e-31 140.2 286 49.3
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 3.5e-31 139.8 204 50.5
Dinv37043 Davidia involucrata HOM05D001562 ORTHO05D001437 8.7e-30 135.2 179 63.7
SalBow1G3436 Salvia bowleyana HOM05D001562 ORTHO05D001437 7.3e-29 132.1 294 49.3
Medtr7g087450 Medicago truncatula HOM05D001562 ORTHO05D001437 4.8e-28 129.4 283 46.6
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 1.4e-27 127.9 313 48.2
Sc01g0005840 Simmondsia chinensis HOM05D001562 ORTHO05D001437 9.9e-26 121.7 309 44.3
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 2.2e-25 120.6 301 45.5
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 4.9e-25 119.4 304 46.4
Cc00_g08630 Coffea canephora HOM05D001562 ORTHO05D001437 1.1e-24 118.2 255 46.3
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 2.3e-22 110.5 192 45.8
HanXRQChr10g0298571 Helianthus annuus HOM05D001562 ORTHO05D001437 3.9e-22 109.8 199 46.7
AUR62036494 Chenopodium quinoa HOM05D001562 ORTHO05D001437 2.5e-21 107.1 204 40.7
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 2.5e-21 107.1 323 47.4
Lsat_1_v5_gn_9_32321 Lactuca sativa HOM05D002043 ORTHO05D002207 9.6e-21 105.1 192 49.0
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 1.3e-20 104.8 300 43.3
Hund15148 Selenicereus undatus HOM05D001562 ORTHO05D001437 1.6e-20 104.4 318 42.5
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 4.8e-20 102.8 309 41.4
PSO384G0282 Papaver somniferum HOM05D001562 ORTHO05D001437 1.7e-17 94.4 296 47.0
PSO339G4702 Papaver somniferum HOM05D001562 ORTHO05D001437 2.9e-17 93.6 302 47.0
Ah.12g062100 Amaranthus hybridus HOM05D001562 ORTHO05D001437 4.6e-15 86.3 331 40.5
Migut.K00188 Erythranthe guttata HOM05D001562 ORTHO05D001437 3.0e-14 83.6 318 38.7
Cpa.g.sc73.47 Carica papaya HOM05D001562 ORTHO05D001437 4.3e-13 79.7 132 60.6
HPP92_007505 Vanilla planifolia HOM05D001562 ORTHO05D001437 4.0e-11 73.2 316 36.4
CDE08G0256 Ceratophyllum demersum HOM05D001562 ORTHO05D001437 1.0e-09 68.6 199 40.7
CDE09G0199 Ceratophyllum demersum HOM05D001562 ORTHO05D001437 3.2e-08 63.5 311 38.9
CAN.G1156.18 Capsicum annuum HOM05D001562 ORTHO05D001437 1.6e-07 61.2 99 47.5
CDE09G0429 Ceratophyllum demersum HOM05D001562 ORTHO05D001437 1.0e-06 58.5 193 46.1
CAN.G1156.19 Capsicum annuum HOM05D001562 ORTHO05D001437 8.7e-06 55.5 136 51.5


User provided reference genes

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