Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19826 Corylus avellana HOM05D000042 ORTHO05D000028 1.0e-64 250.0 132 100.0
Haze_19831 Corylus avellana HOM05D000042 ORTHO05D000028 9.6e-63 243.4 132 98.5
Cfa016796 Carpinus fangiana HOM05D000042 ORTHO05D000028 3.4e-52 208.4 186 67.2
QL07p001582 Quercus lobata HOM05D000042 ORTHO05D000028 2.9e-35 152.1 200 48.0
CiPaw.09G039300 Carya illinoinensis HOM05D000042 ORTHO05D000028 1.8e-29 132.9 137 62.0
Ciclev10005698m.g Citrus clementina HOM05D000042 ORTHO05D000028 4.7e-25 118.2 109 63.3
MD00G1106300 Malus domestica HOM05D000042 ORTHO05D000028 5.1e-24 114.8 133 54.9
Atru.chr1.1136 Acer truncatum HOM05D000042 ORTHO05D000028 8.8e-24 114.0 106 66.0
Potri.006G048700 Populus trichocarpa HOM05D000042 ORTHO05D000028 7.4e-23 110.9 188 40.4
Sabra06G0034000 Salix brachista HOM05D000042 ORTHO05D000028 2.8e-22 109.0 131 51.1
Duzib093G0336 Durio zibethinus HOM05D000042 ORTHO05D000028 8.2e-22 107.5 112 58.0
Glyma.02G185500 Glycine max HOM05D000042 ORTHO05D000028 4.1e-21 105.1 187 41.7
Phvul.007G251600 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 9.1e-21 104.0 130 51.5
Ca_27021_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 5.9e-20 101.3 107 61.7
Duzib106G1526 Durio zibethinus HOM05D000042 ORTHO05D000028 1.0e-19 100.5 113 55.8
Manes.09G019300 Manihot esculenta HOM05D000042 ORTHO05D000028 1.3e-19 100.1 137 51.8
VMungo0720G3184 Vigna mungo HOM05D000042 ORTHO05D000028 4.2e-18 95.1 131 50.4
Lalb_Chr21g0316521 Lupinus albus HOM05D000042 ORTHO05D000028 5.5e-18 94.7 130 50.8
TWI77G0779 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 7.2e-18 94.4 107 56.1
Medtr1g053070 Medicago truncatula HOM05D000042 ORTHO05D000028 3.0e-16 89.0 106 55.7
Psat6g113320 Pisum sativum HOM05D000042 ORTHO05D000028 2.6e-15 85.9 130 47.7
Thecc.05G150100 Theobroma cacao HOM05D000042 ORTHO05D000028 6.3e-14 81.3 112 48.2
Gorai.007G360800 Gossypium raimondii HOM05D000042 ORTHO05D000028 2.4e-13 79.3 198 35.4
TAR633G2262 Trochodendron aralioides HOM05D000042 ORTHO05D000028 9.1e-13 77.4 132 43.2
Duzib128G0515 Durio zibethinus HOM05D000042 ORTHO05D000028 1.6e-12 76.6 99 52.5
Gohir.D11G329600 Gossypium hirsutum HOM05D000042 ORTHO05D000028 4.5e-12 75.1 198 35.4
Manes.07G011600 Manihot esculenta HOM05D000042 ORTHO05D000028 1.3e-11 73.6 114 45.6
Cfa010822 Carpinus fangiana HOM05D000042 ORTHO05D000028 2.2e-11 72.8 136 39.0
Prupe.7G055900 Prunus persica HOM05D000042 ORTHO05D000028 8.5e-11 70.9 108 52.8
Lj5g0007892 Lotus japonicus HOM05D000042 ORTHO05D000028 1.1e-10 70.5 159 34.6
PGR004G1335 Punica granatum HOM05D000042 ORTHO05D000028 1.1e-10 70.5 109 45.0
CANSAT80G1550 Cannabis sativa HOM05D000042 ORTHO05D000028 1.5e-10 70.1 138 39.1
Dinv39623 Davidia involucrata HOM05D000042 ORTHO05D000028 1.5e-10 70.1 131 42.0
FAN01G3037 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.9e-10 69.7 144 37.5
Aqoxy1G00318 Aquilegia oxysepala HOM05D000042 ORTHO05D000028 4.2e-10 68.6 139 36.7
CSS0023376 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 7.2e-10 67.8 108 47.2
Lj3g0001475 Lotus japonicus HOM05D000042 ORTHO05D000028 9.4e-10 67.4 112 42.9
Cc06_g17700 Coffea canephora HOM05D000042 ORTHO05D000028 1.6e-09 66.6 123 45.5
MBI17_g18123_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000028 2.1e-09 66.2 135 40.7
Nn7g36342 Nelumbo nucifera HOM05D000042 ORTHO05D000028 2.1e-09 66.2 114 42.1
Cfa016798 Carpinus fangiana HOM05D000042 ORTHO05D000028 2.7e-09 65.9 113 44.2
Ciclev10032519m.g Citrus clementina HOM05D000042 ORTHO05D000028 2.7e-09 65.9 112 40.2
DCAR_020500 Daucus carota HOM05D000042 ORTHO05D000028 2.7e-09 65.9 91 49.5
Lalb_Chr19g0140231 Lupinus albus HOM05D000042 ORTHO05D000028 2.7e-09 65.9 115 40.9
THA.LOC104824433 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 4.7e-09 65.1 110 44.5
CSS0039724 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 6.1e-09 64.7 105 46.7
arahy.Tifrunner.gnm1.ann1.XIQ273 Arachis hypogaea HOM05D000042 ORTHO05D000028 8.0e-09 64.3 148 37.2
Lju124C44T12 Lonicera japonica HOM05D000042 ORTHO05D000028 8.0e-09 64.3 126 42.9
Ca_26441_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 1.0e-08 63.9 110 42.7
Eucgr.G03284 Eucalyptus grandis HOM05D000042 ORTHO05D000028 1.0e-08 63.9 136 39.0
Medtr0003s0590 Medicago truncatula HOM05D000042 ORTHO05D000028 1.0e-08 63.9 134 36.6
TPR.G8340 Trifolium pratense HOM05D000042 ORTHO05D000028 1.0e-08 63.9 134 38.1
MD02G1301400 Malus domestica HOM05D000042 ORTHO05D000028 1.4e-08 63.5 108 42.6
THA.LOC104817587 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 1.4e-08 63.5 115 40.9
arahy.Tifrunner.gnm1.ann1.BJW67H Arachis hypogaea HOM05D000042 ORTHO05D000028 2.3e-08 62.8 142 38.0
Atru.chr11.2528 Acer truncatum HOM05D000042 ORTHO05D000028 3.0e-08 62.4 113 41.6
FAN03G2904 Fragaria x ananassa HOM05D000042 ORTHO05D000028 4.0e-08 62.0 105 41.9
MD07G1022500 Malus domestica HOM05D000042 ORTHO05D000028 4.0e-08 62.0 115 41.7
QL04p010447 Quercus lobata HOM05D000042 ORTHO05D000028 4.0e-08 62.0 135 37.0
Prupe.2G023100 Prunus persica HOM05D000042 ORTHO05D000028 5.2e-08 61.6 104 45.2
TWI53G0011 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 6.7e-08 61.2 184 33.2
FAN06G4485 Fragaria x ananassa HOM05D000042 ORTHO05D000028 8.8e-08 60.8 105 41.0
Lalb_Chr01g0000501 Lupinus albus HOM05D000042 ORTHO05D000028 1.2e-07 60.5 142 37.3
RcHm_v2.0_Chr1g0318281 Rosa chinensis HOM05D000042 ORTHO05D000028 2.0e-07 59.7 105 41.9
FvH4_7g01720 Fragaria vesca HOM05D000042 ORTHO05D000028 3.3e-07 58.9 103 40.8
C08p32790 Brassica napus HOM05D000042 ORTHO05D000028 4.4e-07 58.5 108 43.5
BolC8t50890H Brassica oleracea HOM05D000042 ORTHO05D000028 4.4e-07 58.5 108 43.5
Cpa.g.c37200 Carica papaya HOM05D000042 ORTHO05D000028 4.4e-07 58.5 90 50.0
CsaV3_4G028880 Cucumis sativus L. HOM05D000042 ORTHO05D000028 5.7e-07 58.2 111 37.8
Aa31LG10G12220 Aethionema arabicum HOM05D000042 ORTHO05D000028 7.5e-07 57.8 104 40.4
AT3G57390 Arabidopsis thaliana HOM05D000042 ORTHO05D000028 9.7e-07 57.4 119 39.5
CsaV3_3G031900 Cucumis sativus L. HOM05D000042 ORTHO05D000028 1.3e-06 57.0 109 38.5
PSO384G4921 Papaver somniferum HOM05D000042 ORTHO05D000028 1.3e-06 57.0 135 35.6
Gohir.D11G330500 Gossypium hirsutum HOM05D000042 ORTHO05D000028 1.7e-06 56.6 170 32.4
Gorai.008G112400 Gossypium raimondii HOM05D000042 ORTHO05D000028 2.2e-06 56.2 108 38.9
GSVIVG01001437001 Vitis vinifera HOM05D000042 ORTHO05D000028 2.2e-06 56.2 93 43.0
EL10Ac2g04380 Beta vulgaris HOM05D000042 ORTHO05D000028 2.8e-06 55.8 146 34.9
PSO339G2047 Papaver somniferum HOM05D000042 ORTHO05D000028 2.8e-06 55.8 135 34.8
EL10Ac3g07106 Beta vulgaris HOM05D000042 ORTHO05D000028 3.7e-06 55.5 82 46.3
Nn2g15187 Nelumbo nucifera HOM05D000042 ORTHO05D000028 3.7e-06 55.5 112 39.3
MSTRG.6418 Avicennia marina HOM05D000042 ORTHO05D000028 4.8e-06 55.1 96 42.7
Gohir.A12G100400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.3e-06 54.7 107 38.3
Gohir.D12G103400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 6.3e-06 54.7 107 38.3
Actinidia23254 Actinidia chinensis HOM05D000042 ORTHO05D000028 8.2e-06 54.3 132 34.8
BraA04t16037Z Brassica rapa HOM05D000042 ORTHO05D000028 8.2e-06 54.3 127 37.8
Solyc01g087990.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 8.2e-06 54.3 118 36.4


User provided reference genes

Program Settings