Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 5.1e-168 594.3 306 100.0
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 8.5e-147 523.9 269 99.3
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 2.6e-127 459.1 270 87.4
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 3.4e-103 379.0 270 72.2
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 1.7e-102 376.7 270 71.9
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 4.1e-101 372.1 272 71.3
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 4.2e-69 265.8 274 55.8
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 1.3e-67 260.8 270 53.3
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 6.7e-67 258.5 274 54.4
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 4.3e-66 255.8 270 53.0
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 7.4e-66 255.0 275 51.3
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 4.8e-65 252.3 274 50.4
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 6.2e-65 251.9 270 50.7
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 8.2e-65 251.5 270 51.5
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 1.4e-64 250.8 279 52.7
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 9.0e-64 248.1 236 55.5
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 3.4e-63 246.1 272 54.8
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.3e-62 244.2 272 51.1
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.7e-62 243.8 284 50.4
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.2e-62 243.4 274 50.7
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 2.2e-62 243.4 234 55.6
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 3.8e-62 242.7 274 50.4
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.8e-62 242.7 274 51.5
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.1e-61 241.1 275 48.0
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.1e-61 241.1 274 51.8
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 1.4e-61 240.7 276 49.6
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.5e-61 240.0 274 51.1
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.2e-60 237.7 277 48.0
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.2e-60 237.7 274 51.1
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 1.6e-60 237.3 276 49.3
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 2.7e-60 236.5 274 48.5
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 1.3e-59 234.2 276 46.7
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 2.3e-59 233.4 273 47.6
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 3.0e-59 233.0 274 48.5
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 6.7e-59 231.9 275 49.5
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 1.1e-58 231.1 262 50.0
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 1.1e-58 231.1 277 46.9
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 1.9e-58 230.3 262 50.0
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 1.9e-58 230.3 274 47.1
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 3.3e-58 229.6 272 49.3
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 4.3e-58 229.2 250 50.0
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.4e-58 228.4 250 50.0
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 1.3e-57 227.6 274 48.2
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.6e-57 227.3 251 49.8
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 2.2e-57 226.9 270 47.4
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 2.8e-57 226.5 215 55.8
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 3.7e-57 226.1 272 47.8
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 4.8e-57 225.7 276 47.1
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 6.3e-57 225.3 283 45.9
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 1.4e-56 224.2 273 46.5
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 1.8e-56 223.8 274 48.5
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 6.9e-56 221.9 274 46.4
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 1.5e-55 220.7 274 44.9
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.6e-55 219.9 241 50.2
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 3.4e-55 219.5 234 48.7
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 4.5e-55 219.2 277 44.0
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.3e-54 217.6 270 46.7
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 2.9e-54 216.5 263 47.5
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 1.9e-53 213.8 280 46.4
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 3.2e-53 213.0 279 48.4
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 5.5e-53 212.2 265 46.4
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 7.2e-53 211.8 263 45.6
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.2e-52 211.1 266 45.9
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.6e-52 209.5 236 47.5
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 7.9e-52 208.4 254 47.2
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.0e-51 208.0 274 46.4
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 1.4e-51 207.6 262 43.9
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 8.8e-51 204.9 273 43.2
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 1.5e-50 204.1 274 44.5
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 1.5e-50 204.1 226 49.6
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 3.3e-50 203.0 275 42.5
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 3.3e-50 203.0 265 45.3
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 5.7e-50 202.2 279 43.7
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 5.7e-50 202.2 274 44.2
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 5.7e-50 202.2 215 51.2
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 9.7e-50 201.4 234 46.6
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.3e-49 201.1 275 44.0
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.7e-49 200.7 274 45.6
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.7e-49 200.7 222 50.0
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 2.2e-49 200.3 275 40.7
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 2.2e-49 200.3 274 46.0
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 3.7e-49 199.5 274 46.0
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 4.8e-49 199.1 231 50.2
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 4.8e-49 199.1 274 45.6
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 4.8e-49 199.1 274 45.3
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.1e-48 198.0 231 50.2
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.8e-48 197.2 273 45.1
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.8e-48 197.2 216 48.6
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 2.4e-48 196.8 232 47.0
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 9.1e-48 194.9 204 52.0
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.2e-47 194.5 274 44.9
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 2.6e-47 193.4 272 42.3
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 3.4e-47 193.0 239 42.3
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 4.5e-47 192.6 275 40.7
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 5.9e-47 192.2 274 43.8
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 7.7e-47 191.8 196 54.6
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.3e-46 191.0 273 44.3
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 1.4e-45 187.6 275 41.1
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 3.2e-45 186.4 274 40.1
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 7.2e-45 185.3 274 43.1
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 9.4e-45 184.9 274 39.8
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.1e-44 183.7 274 40.9
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 2.1e-44 183.7 231 45.5
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 2.1e-44 183.7 313 38.7
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 2.7e-44 183.3 275 41.1
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 4.7e-44 182.6 239 43.5
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.1e-44 182.2 274 40.9
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 6.1e-44 182.2 279 39.8
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 7.9e-44 181.8 234 44.0
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 1.0e-43 181.4 263 40.7
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 1.4e-43 181.0 244 40.2
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 1.8e-43 180.6 276 39.5
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 2.3e-43 180.3 275 40.4
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 6.7e-43 178.7 285 38.6
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 6.7e-43 178.7 285 38.6
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 1.5e-42 177.6 274 39.1
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.5e-42 177.6 283 39.2
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 2.0e-42 177.2 276 38.4
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 2.0e-42 177.2 276 38.4
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 2.6e-42 176.8 285 38.9
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 2.6e-42 176.8 277 40.1
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 5.7e-42 175.6 274 42.3
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 5.7e-42 175.6 263 39.2
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 7.4e-42 175.3 301 37.9
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 7.4e-42 175.3 216 48.1
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 2.2e-41 173.7 292 37.7
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 6.3e-41 172.2 285 37.9
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 6.3e-41 172.2 194 49.0
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 2.4e-40 170.2 183 50.8
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 3.1e-40 169.9 276 37.7
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 3.1e-40 169.9 276 37.7
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 3.1e-40 169.9 184 47.8
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 9.1e-40 168.3 217 44.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.6e-39 166.8 237 40.9
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.3e-38 164.5 160 53.1
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 3.8e-38 162.9 322 36.0
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 4.2e-37 159.5 229 44.1
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 9.4e-37 158.3 236 41.9
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.2e-36 157.9 218 43.1
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 1.8e-35 154.1 185 46.5
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.5e-34 151.0 221 38.9
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 2.6e-34 150.2 270 35.6
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.6e-34 150.2 248 37.5
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.7e-34 149.1 271 36.2
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 9.7e-34 148.3 219 40.6
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.2e-33 147.1 218 37.6
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 4.8e-33 146.0 128 64.1
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 2.2e-30 137.1 230 37.8
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.9e-30 136.7 186 44.6
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.5e-29 134.4 160 52.5
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 2.5e-29 133.7 231 39.4
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 3.2e-29 133.3 234 38.0
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.2e-29 133.3 270 35.2
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.8e-27 127.5 181 43.1
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 5.2e-27 125.9 185 42.2
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 8.8e-27 125.2 110 59.1
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 2.6e-26 123.6 110 59.1
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 4.4e-26 122.9 214 37.4
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.1e-24 118.2 71 84.5
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.3e-22 111.3 306 30.1
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 3.8e-22 109.8 178 34.8
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 1.9e-21 107.5 202 34.7
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 1.6e-20 104.4 174 35.6
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 2.1e-20 104.0 326 27.3
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.0e-19 101.7 125 49.6
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 2.8e-17 93.6 151 35.8
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 1.4e-16 91.3 74 63.5
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 4.1e-16 89.7 76 63.2
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 4.1e-16 89.7 245 30.2
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.5e-15 86.7 270 28.1
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 5.9e-15 85.9 270 27.8
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 2.9e-14 83.6 91 45.1
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 8.6e-14 82.0 86 47.7
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-13 80.9 141 34.0
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 5.5e-13 79.3 124 44.4
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 3.4e-10 70.1 80 52.5
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.2e-09 67.4 88 43.2
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.2e-09 67.4 91 46.2
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 3.2e-08 63.5 150 32.0
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 3.2e-08 63.5 90 41.1
QL07p002898 Quercus lobata HOM05D003612 ORTHO05D004323 1.2e-07 61.6 31 77.4
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 1.0e-06 58.5 128 31.2
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 8.6e-06 55.5 66 45.5


User provided reference genes

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