Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 7.6e-98 360.5 186 100.0
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.0e-66 256.1 171 79.5
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.7e-65 253.1 181 74.6
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 9.4e-64 247.3 187 72.2
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 1.8e-62 243.0 180 71.7
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 3.9e-62 241.9 180 70.6
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.0e-61 239.6 187 69.5
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.5e-61 239.2 187 70.6
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 5.7e-61 238.0 190 71.6
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.7e-61 238.0 169 75.7
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 9.7e-61 237.3 183 72.1
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 2.8e-60 235.7 187 67.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 3.7e-60 235.3 186 68.8
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 4.8e-60 235.0 180 70.6
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.1e-59 233.8 188 68.6
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 1.4e-59 233.4 171 73.7
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.8e-59 233.0 187 69.0
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.8e-59 233.0 187 69.0
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 3.1e-59 232.3 180 71.1
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 9.1e-59 230.7 191 66.0
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.2e-58 230.3 169 74.6
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.2e-58 230.3 169 74.6
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.5e-58 229.9 188 67.6
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 2.0e-58 229.6 188 68.6
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 3.4e-58 228.8 182 69.2
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 7.7e-58 227.6 169 73.4
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.3e-57 226.9 184 69.0
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 3.8e-57 225.3 180 68.9
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 5.0e-57 224.9 187 65.2
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 6.5e-57 224.6 187 66.8
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 9.4e-56 220.7 188 67.6
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 4.7e-55 218.4 187 65.2
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 5.1e-54 214.9 169 71.6
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.0e-53 213.0 185 65.9
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 4.4e-53 211.8 184 68.5
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.1e-51 207.2 183 64.5
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.8e-51 206.5 183 65.6
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 1.8e-51 206.5 180 65.6
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 3.1e-51 205.7 189 64.6
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 9.1e-51 204.1 170 67.1
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 2.6e-50 202.6 174 67.8
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 3.5e-50 202.2 172 69.2
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 5.9e-50 201.4 189 63.0
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 7.7e-50 201.1 182 64.8
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 7.7e-50 201.1 181 64.6
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 3.8e-49 198.7 183 63.9
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 5.0e-49 198.4 182 64.3
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 8.5e-49 197.6 182 63.7
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.1e-48 197.2 184 63.0
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.4e-48 196.8 110 91.8
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.4e-48 196.8 184 63.0
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.5e-48 196.1 186 61.8
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.5e-48 196.1 172 67.4
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 2.5e-48 196.1 189 62.4
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.5e-48 196.1 170 65.9
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.2e-48 195.7 164 69.5
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 4.2e-48 195.3 187 62.6
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 5.5e-48 194.9 184 62.5
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.2e-47 193.7 182 62.6
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 2.1e-47 193.0 186 62.9
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.1e-47 193.0 182 63.2
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 4.7e-47 191.8 138 74.6
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 4.7e-47 191.8 183 60.7
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.0e-46 190.7 180 61.7
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-46 189.5 186 60.2
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 3.9e-46 188.7 183 62.8
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 8.8e-46 187.6 182 59.3
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.5e-45 186.8 189 60.8
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 2.6e-45 186.0 195 59.0
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 5.7e-45 184.9 167 65.3
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 7.4e-45 184.5 182 61.0
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 9.7e-45 184.1 183 60.1
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.3e-44 183.7 193 56.5
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 2.8e-44 182.6 189 59.8
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.2e-44 181.0 184 59.8
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.8e-43 179.9 186 58.1
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 3.1e-43 179.1 189 58.2
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 4.1e-43 178.7 189 58.2
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 5.3e-43 178.3 180 56.7
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.2e-42 177.2 169 62.1
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 5.9e-42 174.9 180 60.6
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.3e-41 173.7 141 69.5
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 2.5e-40 169.5 169 57.4
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.2e-39 167.2 187 59.4
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.1e-39 166.4 190 54.7
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.0e-38 162.5 174 59.2
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 4.0e-38 162.2 159 62.9
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 4.0e-38 162.2 169 59.2
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 8.8e-38 161.0 189 52.4
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 3.3e-37 159.1 188 53.2
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.3e-36 157.1 175 56.0
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.7e-36 156.8 141 65.2
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.7e-36 156.8 191 51.8
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 2.8e-36 156.0 180 52.2
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.8e-36 156.0 165 55.8
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 4.8e-36 155.2 185 54.6
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 4.8e-36 155.2 185 54.6
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 8.3e-36 154.5 172 54.1
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 1.1e-35 154.1 171 57.9
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.4e-35 153.7 141 68.8
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 7.0e-35 151.4 181 54.1
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 9.1e-35 151.0 191 47.6
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 7.7e-34 147.9 190 52.6
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.0e-33 147.5 180 52.8
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 4.2e-32 142.1 143 58.0
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 5.5e-32 141.7 181 50.3
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.7e-31 139.4 182 50.5
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.4e-30 137.1 179 45.8
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 9.8e-29 131.0 209 43.5
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.3e-28 130.6 171 48.0
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 4.1e-27 125.6 96 67.7
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 5.4e-27 125.2 138 55.1
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.6e-26 123.6 180 46.1
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 3.5e-26 122.5 139 54.0
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 1.3e-25 120.6 186 44.1
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 1.3e-25 120.6 186 44.1
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 3.8e-25 119.0 191 42.9
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 8.0e-23 111.3 172 44.2
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 4.0e-22 109.0 192 39.1
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 4.0e-22 109.0 85 65.9
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 3.4e-21 105.9 186 40.3
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 7.5e-21 104.8 140 50.7
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.3e-20 104.0 79 77.2
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.4e-19 100.5 199 42.2
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 1.2e-18 97.4 80 70.0
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 5.0e-17 92.0 84 58.3
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 4.3e-16 89.0 137 44.5
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 3.6e-15 85.9 80 63.8
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.7e-15 85.5 71 66.2
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 8.0e-15 84.7 68 67.6
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.0e-14 84.3 71 64.8
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 6.8e-14 81.6 88 54.5
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 2.6e-13 79.7 92 48.9
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 4.4e-13 79.0 78 62.8
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 8.3e-12 74.7 80 53.8
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.6e-10 70.5 54 63.0
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 1.5e-08 63.9 55 70.9
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 1.9e-08 63.5 111 39.6


User provided reference genes

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