Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 1.5e-248 862.8 524 100.0
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 3.7e-66 256.9 160 81.2
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 4.5e-64 250.0 160 79.4
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 8.5e-55 219.2 151 74.8
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 1.1e-46 192.2 152 68.4
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 7.2e-46 189.5 152 67.8
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 1.2e-45 188.7 150 68.0
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 2.7e-45 187.6 144 69.4
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 1.2e-43 182.2 136 66.2
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 2.0e-43 181.4 145 63.4
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 5.7e-43 179.9 140 65.0
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 7.5e-43 179.5 160 60.0
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 2.2e-42 177.9 154 60.4
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.8e-42 176.8 145 63.4
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 4.8e-42 176.8 138 65.2
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 1.4e-41 175.3 148 58.1
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.4e-41 174.5 160 58.8
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 5.9e-40 169.9 141 60.3
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 7.7e-40 169.5 144 59.7
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 2.3e-39 167.9 161 54.7
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 1.9e-38 164.9 135 60.0
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 9.5e-38 162.5 135 61.5
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 2.8e-37 161.0 164 54.3
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 3.6e-37 160.6 135 59.3
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 3.6e-37 160.6 163 50.3
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 6.1e-37 159.8 138 58.7
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 1.0e-36 159.1 146 58.2
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 1.8e-36 158.3 139 56.1
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 2.3e-36 157.9 157 51.0
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 4.0e-36 157.1 136 57.4
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 4.0e-36 157.1 136 57.4
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 5.2e-36 156.8 129 61.2
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 5.2e-36 156.8 152 54.6
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 8.9e-36 156.0 135 58.5
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 8.9e-36 156.0 158 52.5
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.2e-35 155.6 557 29.8
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 1.5e-35 155.2 150 56.0
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 1.5e-35 155.2 163 48.5
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 4.4e-35 153.7 149 53.7
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 4.4e-35 153.7 153 53.6
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 1.3e-34 152.1 165 49.1
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 2.2e-34 151.4 153 52.9
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 3.7e-34 150.6 149 54.4
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 1.4e-33 148.7 137 54.7
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 1.4e-33 148.7 150 54.0
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 1.4e-33 148.7 135 56.3
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.4e-33 148.7 150 49.3
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 1.4e-33 148.7 481 28.7
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 4.1e-33 147.1 150 53.3
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 5.4e-33 146.7 134 55.2
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 9.2e-33 146.0 168 46.4
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 9.2e-33 146.0 168 46.4
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 1.2e-32 145.6 142 50.7
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 1.6e-32 145.2 129 55.0
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 2.0e-32 144.8 148 51.4
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 2.0e-32 144.8 149 51.7
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 2.0e-32 144.8 134 54.5
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 3.5e-32 144.1 135 52.6
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 3.5e-32 144.1 167 46.1
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 3.5e-32 144.1 135 51.9
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 3.5e-32 144.1 134 53.7
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 4.5e-32 143.7 131 53.4
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 7.8e-32 142.9 168 45.8
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 7.8e-32 142.9 166 46.4
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 7.8e-32 142.9 149 51.7
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 2.3e-31 141.4 165 46.7
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 5.0e-31 140.2 150 48.7
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 8.6e-31 139.4 124 58.1
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 1.5e-30 138.7 135 51.1
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 2.5e-30 137.9 148 50.0
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 3.3e-30 137.5 155 48.4
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 3.3e-30 137.5 150 48.7
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 5.6e-30 136.7 140 50.7
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 5.6e-30 136.7 104 70.2
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 9.5e-30 136.0 147 51.0
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 1.2e-29 135.6 115 60.9
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 4.7e-29 133.7 134 52.2
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 6.1e-29 133.3 135 50.4
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 7.5e-27 126.3 148 45.3
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 9.2e-25 119.4 90 65.6
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 9.2e-25 119.4 108 56.5
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 3.0e-23 114.4 102 57.8
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 5.0e-23 113.6 137 46.7
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 1.5e-22 112.1 93 62.4
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 8.9e-20 102.8 146 37.7
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 8.9e-20 102.8 100 47.0
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 1.2e-19 102.4 94 54.3
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.0e-19 101.7 98 50.0
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 2.6e-19 101.3 93 50.5
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 2.6e-19 101.3 98 49.0
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 3.4e-19 100.9 93 49.5
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 8.3e-18 96.3 94 51.1
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 8.3e-18 96.3 101 48.5
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 4.6e-16 90.5 98 45.9
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 1.0e-15 89.4 108 43.5
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 8.6e-15 86.3 94 44.7
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 1.1e-14 85.9 94 44.7
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.5e-14 84.7 94 43.6
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 7.3e-14 83.2 130 38.5
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 4.1e-09 67.4 44 59.1
BraA05t22010Z Brassica rapa HOM05D006707 ORTHO05D008243 2.7e-08 64.7 47 59.6
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 3.5e-08 64.3 67 47.8
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 1.0e-07 62.8 45 53.3
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 3.9e-07 60.8 87 39.1
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.5e-06 58.9 63 47.6
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.5e-06 58.2 80 37.5
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 4.3e-06 57.4 77 44.2


User provided reference genes

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