Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18654 Corylus avellana HOM05D000620 ORTHO05D000537 2.0e-77 292.4 150 100.0
Haze_18603 Corylus avellana HOM05D000620 ORTHO05D000537 3.4e-56 221.9 144 83.3
Cfa006820 Carpinus fangiana HOM05D000620 ORTHO05D000537 1.9e-38 162.9 119 79.0
Haze_18604 Corylus avellana HOM05D000620 ORTHO05D000537 1.0e-36 157.1 147 62.6
CiPaw.08G146900 Carya illinoinensis HOM05D000620 ORTHO05D000537 4.8e-34 148.3 136 67.6
QL06p037603 Quercus lobata HOM05D000620 ORTHO05D000537 1.1e-33 147.1 134 67.9
CANSAT01G2032 Cannabis sativa HOM05D000620 ORTHO05D000537 1.4e-30 136.7 136 61.0
FvH4_1g18891 Fragaria vesca HOM05D000620 ORTHO05D000537 3.5e-29 132.1 144 59.7
Prupe.6G210600 Prunus persica HOM05D000620 ORTHO05D000537 1.9e-27 126.3 150 58.0
TWI74G1480 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 1.3e-26 123.6 124 58.9
Manes.12G120700 Manihot esculenta HOM05D000620 ORTHO05D000537 1.1e-25 120.6 113 61.9
Lalb_Chr05g0216161 Lupinus albus HOM05D000620 ORTHO05D000537 1.8e-25 119.8 108 61.1
PGR031G0397 Punica granatum HOM05D000620 ORTHO05D000537 5.3e-25 118.2 112 62.5
RcHm_v2.0_Chr2g0109851 Rosa chinensis HOM05D000620 ORTHO05D000537 5.3e-25 118.2 144 56.2
Medtr5g030690 Medicago truncatula HOM05D000620 ORTHO05D000537 5.8e-24 114.8 99 66.7
Medtr5g430750 Medicago truncatula HOM05D000620 ORTHO05D000537 5.8e-24 114.8 99 66.7
MD01G1045900 Malus domestica HOM05D000620 ORTHO05D000537 7.6e-24 114.4 139 54.0
Duzib187G1551 Durio zibethinus HOM05D000620 ORTHO05D000537 1.0e-23 114.0 117 59.0
CiPaw.07G041700 Carya illinoinensis HOM05D000620 ORTHO05D000537 2.9e-23 112.5 125 56.0
VMungo1215G1735 Vigna mungo HOM05D000620 ORTHO05D000537 2.9e-23 112.5 130 53.1
Phvul.002G140850 Phaseolus vulgaris HOM05D000620 ORTHO05D000537 4.9e-23 111.7 120 54.2
Hma1.2p1_0080F.1_g042180 Hydrangea macrophylla HOM05D000620 ORTHO05D000537 1.9e-22 109.8 128 50.8
arahy.Tifrunner.gnm1.ann1.CFHF82 Arachis hypogaea HOM05D000620 ORTHO05D000537 3.2e-22 109.0 126 55.6
arahy.Tifrunner.gnm1.ann1.PMPR50 Arachis hypogaea HOM05D000620 ORTHO05D000537 3.2e-22 109.0 126 55.6
Lj2g0014308 Lotus japonicus HOM05D000620 ORTHO05D000537 1.2e-21 107.1 102 65.7
Glyma.09G203400 Glycine max HOM05D000620 ORTHO05D000537 2.1e-21 106.3 124 55.6
Thecc.01G082600 Theobroma cacao HOM05D000620 ORTHO05D000537 4.6e-21 105.1 82 64.6
CSS0017835 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 6.0e-21 104.8 128 50.0
PGSC0003DMG400030617 Solanum tuberosum HOM05D000620 ORTHO05D000537 7.9e-21 104.4 128 52.3
Lalb_Chr16g0381421 Lupinus albus HOM05D000620 ORTHO05D000537 1.0e-20 104.0 110 59.1
Solyc02g091710.3 Solanum lycopersicum HOM05D000620 ORTHO05D000537 1.8e-20 103.2 129 51.9
Sopen02g036320 Solanum pennellii HOM05D000620 ORTHO05D000537 1.8e-20 103.2 129 51.9
CSS0034256 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 8.7e-20 100.9 128 50.0
CAN.G1061.18 Capsicum annuum HOM05D000620 ORTHO05D000537 8.7e-20 100.9 121 52.9
Duzib264G0819 Durio zibethinus HOM05D000620 ORTHO05D000537 1.1e-19 100.5 82 67.1
Gohir.A11G209500 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.1e-19 100.5 91 61.5
Duzib147G1699 Durio zibethinus HOM05D000620 ORTHO05D000537 1.9e-19 99.8 82 63.4
Gohir.D11G213700 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.9e-19 99.8 83 66.3
Gohir.D03G033900 Gossypium hirsutum HOM05D000620 ORTHO05D000537 3.3e-19 99.0 83 67.5
TPR.G26170 Trifolium pratense HOM05D000620 ORTHO05D000537 4.3e-19 98.6 115 55.7
Dinv26995 Davidia involucrata HOM05D000620 ORTHO05D000537 9.7e-19 97.4 119 50.4
Actinidia29794 Actinidia chinensis HOM05D005790 ORTHO05D030850 1.3e-18 97.1 121 48.8
Glyma.01G019300 Glycine max HOM05D000620 ORTHO05D000537 1.3e-18 97.1 124 51.6
Ca_06071_v3 Cicer arietinum L. HOM05D000620 ORTHO05D000537 1.6e-18 96.7 99 59.6
Gohir.A02G146600 Gossypium hirsutum HOM05D000620 ORTHO05D000537 2.2e-18 96.3 82 65.9
QL12p040148 Quercus lobata HOM05D000620 ORTHO05D000537 2.2e-18 96.3 123 49.6
Lj4A174T34 Lonicera japonica HOM05D000620 ORTHO05D000537 2.8e-18 95.9 149 42.3
COL.COLO4_11670 Corchorus olitorius HOM05D000620 ORTHO05D000537 3.7e-18 95.5 88 62.5
Atru.chr3.1141 Acer truncatum HOM05D000620 ORTHO05D000537 3.1e-17 92.4 138 48.6
Actinidia11930 Actinidia chinensis HOM05D000620 ORTHO05D000537 4.1e-17 92.0 128 46.9
Gorai.003G035600 Gossypium raimondii HOM05D000620 ORTHO05D000537 1.5e-16 90.1 86 62.8
Dinv36985 Davidia involucrata HOM05D000620 ORTHO05D000537 2.0e-16 89.7 89 55.1
DCAR_010764 Daucus carota HOM05D000620 ORTHO05D000537 2.6e-16 89.4 123 51.2
Lsat_1_v5_gn_3_84301 Lactuca sativa HOM05D000620 ORTHO05D000537 7.6e-16 87.8 129 45.0
MBI16_g17834_MAGBIO Magnolia biondii HOM05D000620 ORTHO05D000537 2.2e-15 86.3 121 50.4
Psat2g135120 Pisum sativum HOM05D000620 ORTHO05D000537 2.2e-15 86.3 66 66.7
MSTRG.15332 Avicennia marina HOM05D000620 ORTHO05D000537 5.0e-15 85.1 146 43.8
THA.LOC104807655 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 5.0e-15 85.1 109 50.5
GSVIVG01003713001 Vitis vinifera HOM05D000620 ORTHO05D000537 6.5e-15 84.7 131 45.0
TWI12G0065 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 8.5e-15 84.3 118 47.5
Migut.L00446 Erythranthe guttata HOM05D000620 ORTHO05D000537 1.1e-14 84.0 153 41.8
C02p64280 Brassica napus HOM05D000620 ORTHO05D000537 3.2e-14 82.4 100 48.0
BolC2t12493H Brassica oleracea HOM05D000620 ORTHO05D000537 3.2e-14 82.4 100 48.0
Carub.0004s0183 Capsella rubella HOM05D000620 ORTHO05D000537 3.2e-14 82.4 147 44.2
Rhsim10G0081900 Rhododendron simsii HOM05D000620 ORTHO05D000537 4.2e-14 82.0 103 49.5
arahy.Tifrunner.gnm1.ann1.90KKXU Arachis hypogaea HOM05D000620 ORTHO05D000537 7.2e-14 81.3 123 46.3
BraA02t09328Z Brassica rapa HOM05D000620 ORTHO05D000537 7.2e-14 81.3 100 48.0
GSVIVG01009240001 Vitis vinifera HOM05D000620 ORTHO05D000537 7.2e-14 81.3 124 46.8
A02p44050 Brassica napus HOM05D000620 ORTHO05D000537 1.6e-13 80.1 100 47.0
Duzib041G0423 Durio zibethinus HOM05D000620 ORTHO05D000537 1.6e-13 80.1 116 45.7
A06p32520 Brassica napus HOM05D000620 ORTHO05D000537 2.1e-13 79.7 121 40.5
ClCG08G011900 Citrullus lanatus HOM05D000620 ORTHO05D000537 2.1e-13 79.7 126 44.4
CsaV3_2G030520 Cucumis sativus L. HOM05D000620 ORTHO05D000537 2.1e-13 79.7 126 44.4
arahy.Tifrunner.gnm1.ann1.UKMX5Y Arachis hypogaea HOM05D000620 ORTHO05D000537 2.7e-13 79.3 123 45.5
AT2G22680 Arabidopsis thaliana HOM05D000620 ORTHO05D000537 3.6e-13 79.0 138 44.9
CSS0002357 Camellia sinensis var. sinensis HOM05D000620 ORTHO05D000537 4.6e-13 78.6 124 47.6
ECA246G3097 Erigeron canadensis HOM05D000620 ORTHO05D000537 4.6e-13 78.6 126 47.6
HanXRQChr12g0377101 Helianthus annuus HOM05D000620 ORTHO05D000537 4.6e-13 78.6 126 46.0
Manes.18G054800 Manihot esculenta HOM05D000620 ORTHO05D000537 4.6e-13 78.6 116 48.3
Sp2g28760 Schrenkiella parvula HOM05D000620 ORTHO05D000537 4.6e-13 78.6 121 42.1
BcaC01g02811 Brassica carinata HOM05D000620 ORTHO05D000537 6.1e-13 78.2 121 40.5
C03p60020 Brassica napus HOM05D000620 ORTHO05D000537 6.1e-13 78.2 121 40.5
BolC3t18266H Brassica oleracea HOM05D000620 ORTHO05D000537 6.1e-13 78.2 121 40.5
Carub.0008s2655 Capsella rubella HOM05D000620 ORTHO05D000537 6.1e-13 78.2 107 45.8
MSTRG.23630 Avicennia marina HOM05D000620 ORTHO05D000537 7.9e-13 77.8 84 54.8
Duzib093G0329 Durio zibethinus HOM05D000620 ORTHO05D000537 7.9e-13 77.8 119 46.2
TWI56G0456 Tripterygium wilfordii HOM05D000620 ORTHO05D000537 7.9e-13 77.8 118 46.6
Gohir.A05G215800 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.0e-12 77.4 119 47.1
TAR376G0011 Trochodendron aralioides HOM05D000620 ORTHO05D000537 1.0e-12 77.4 87 52.9
Nn1g05769 Nelumbo nucifera HOM05D000620 ORTHO05D000537 1.4e-12 77.0 142 40.1
Thhalv10003723m.g Eutrema salsugineum HOM05D000620 ORTHO05D000537 1.8e-12 76.6 119 41.2
Actinidia10260 Actinidia chinensis HOM05D000620 ORTHO05D000537 2.3e-12 76.3 134 44.8
Cpa.g.sc1726.1 Carica papaya HOM05D000620 ORTHO05D000537 2.3e-12 76.3 124 47.6
BcaB06g27816 Brassica carinata HOM05D000620 ORTHO05D000537 3.0e-12 75.9 144 43.1
AL7G12770 Arabidopsis lyrata HOM05D000620 ORTHO05D000537 5.1e-12 75.1 106 47.2
Cc07_g07770 Coffea canephora HOM05D000620 ORTHO05D000537 5.1e-12 75.1 132 42.4
Duzib116G0102 Durio zibethinus HOM05D000620 ORTHO05D000537 5.1e-12 75.1 119 44.5
Oeu059815.1 Olea europaea HOM05D000620 ORTHO05D000537 5.1e-12 75.1 72 56.9
AT4G37890 Arabidopsis thaliana HOM05D000620 ORTHO05D000537 6.7e-12 74.7 110 46.4
BraA06t26178Z Brassica rapa HOM05D000620 ORTHO05D000537 8.8e-12 74.3 121 39.7
Lj2A428T27 Lonicera japonica HOM05D000620 ORTHO05D000537 8.8e-12 74.3 148 40.5
Ca_15546_v3 Cicer arietinum L. HOM05D000620 ORTHO05D000537 1.1e-11 73.9 118 47.5
Sabra02G0084800 Salix brachista HOM05D000620 ORTHO05D000537 1.1e-11 73.9 125 44.8
BcaC01g02846 Brassica carinata HOM05D000620 ORTHO05D000537 1.5e-11 73.6 108 42.6
CDE01G0355 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 1.9e-11 73.2 123 41.5
Potri.002G107902 Populus trichocarpa HOM05D000620 ORTHO05D000537 1.9e-11 73.2 126 45.2
CsaV3_6G044670 Cucumis sativus L. HOM05D000620 ORTHO05D000537 2.5e-11 72.8 120 50.0
AL8G43310 Arabidopsis lyrata HOM05D000620 ORTHO05D000537 3.3e-11 72.4 100 44.0
CDE02G1351 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 3.3e-11 72.4 109 42.2
Dinv22017 Davidia involucrata HOM05D000620 ORTHO05D000537 3.3e-11 72.4 78 55.1
Atru.chr13.937 Acer truncatum HOM05D000620 ORTHO05D000537 4.3e-11 72.0 125 41.6
AT5G65683 Arabidopsis thaliana HOM05D000620 ORTHO05D000537 7.4e-11 71.2 100 45.0
CARHR279640 Cardamine hirsuta HOM05D000620 ORTHO05D000537 7.4e-11 71.2 119 39.5
Thecc.08G077600 Theobroma cacao HOM05D000620 ORTHO05D000537 7.4e-11 71.2 119 42.0
COL.COLO4_35334 Corchorus olitorius HOM05D000620 ORTHO05D000537 9.7e-11 70.9 117 43.6
A04p17150 Brassica napus HOM05D000620 ORTHO05D000537 1.7e-10 70.1 94 52.1
CiPaw.07G161000 Carya illinoinensis HOM05D000620 ORTHO05D000537 1.7e-10 70.1 127 40.9
Migut.H00299 Erythranthe guttata HOM05D000620 ORTHO05D000537 1.7e-10 70.1 119 43.7
Gohir.D05G218900 Gossypium hirsutum HOM05D000620 ORTHO05D000537 1.7e-10 70.1 119 44.5
Lj1g0005542 Lotus japonicus HOM05D000620 ORTHO05D000537 1.7e-10 70.1 126 44.4
MBI16_g36427_MAGBIO Magnolia biondii HOM05D000620 ORTHO05D000537 2.2e-10 69.7 121 46.3
Sed0015414 Sechium edule HOM05D000620 ORTHO05D000537 2.8e-10 69.3 86 51.2
Ah.03g134410 Amaranthus hybridus HOM05D000620 ORTHO05D000537 4.8e-10 68.6 120 45.8
BraA04t17344Z Brassica rapa HOM05D000620 ORTHO05D000537 6.3e-10 68.2 93 51.6
MBI16_g43728_MAGBIO Magnolia biondii HOM05D000620 ORTHO05D000537 8.2e-10 67.8 121 45.5
THA.LOC104824927 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 1.1e-09 67.4 119 42.0
Medtr3g111210 Medicago truncatula HOM05D000620 ORTHO05D000537 1.4e-09 67.0 127 42.5
TPR.G12475 Trifolium pratense HOM05D000620 ORTHO05D000537 1.8e-09 66.6 125 41.6
Actinidia19261 Actinidia chinensis HOM05D000620 ORTHO05D000537 2.4e-09 66.2 132 40.9
MD08G1207200 Malus domestica HOM05D000620 ORTHO05D000537 2.4e-09 66.2 122 41.8
Sp4g01700 Schrenkiella parvula HOM05D000620 ORTHO05D000537 2.4e-09 66.2 140 42.9
Sc07g0000310 Simmondsia chinensis HOM05D000620 ORTHO05D000537 2.4e-09 66.2 132 40.9
Psat5g017720 Pisum sativum HOM05D000620 ORTHO05D000537 3.1e-09 65.9 121 43.8
HanXRQChr09g0262991 Helianthus annuus HOM05D000620 ORTHO05D000537 4.1e-09 65.5 140 37.1
Eucgr.I00623 Eucalyptus grandis HOM05D000620 ORTHO05D000537 5.3e-09 65.1 147 39.5
THA.LOC104800329 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 6.9e-09 64.7 122 40.2
Oeu024995.1 Olea europaea HOM05D000620 ORTHO05D000537 9.1e-09 64.3 72 52.8
vmacro21369 Vaccinium macrocarpon HOM05D000620 ORTHO05D000537 1.5e-08 63.5 129 39.5
PSO210G2143 Papaver somniferum HOM05D000620 ORTHO05D000537 2.0e-08 63.2 137 43.8
TAR381G1698 Trochodendron aralioides HOM05D000620 ORTHO05D000537 2.0e-08 63.2 122 45.9
Eucgr.F00460 Eucalyptus grandis HOM05D000620 ORTHO05D000537 3.4e-08 62.4 140 40.0
Sc02g0008390 Simmondsia chinensis HOM05D000620 ORTHO05D000537 4.5e-08 62.0 101 46.5
Carub.0007s0233 Capsella rubella HOM05D000620 ORTHO05D000537 5.9e-08 61.6 106 44.3
PSO761G0165 Papaver somniferum HOM05D000620 ORTHO05D000537 5.9e-08 61.6 137 43.8
Lsat_1_v5_gn_4_158780 Lactuca sativa HOM05D000620 ORTHO05D000537 7.7e-08 61.2 85 43.5
THA.LOC104799843 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 7.7e-08 61.2 120 40.8
THA.LOC104806910 Tarenaya hassleriana HOM05D000620 ORTHO05D000537 7.7e-08 61.2 120 44.2
Aqoxy6G00622 Aquilegia oxysepala HOM05D000620 ORTHO05D000537 1.0e-07 60.8 118 39.8
A03p65690 Brassica napus HOM05D000620 ORTHO05D000537 1.3e-07 60.5 143 39.2
BraA03t15619Z Brassica rapa HOM05D000620 ORTHO05D000537 1.3e-07 60.5 143 39.2
CARHR113940 Cardamine hirsuta HOM05D000620 ORTHO05D000537 1.3e-07 60.5 86 45.3
Dinv44890 Davidia involucrata HOM05D000620 ORTHO05D000537 1.3e-07 60.5 83 49.4
Prupe.1G540900 Prunus persica HOM05D000620 ORTHO05D000537 1.3e-07 60.5 125 42.4
Cc10_g08180 Coffea canephora HOM05D000620 ORTHO05D000537 1.7e-07 60.1 145 39.3
Eucgr.F02173 Eucalyptus grandis HOM05D000620 ORTHO05D000537 1.7e-07 60.1 129 40.3
BcaC02g08622 Brassica carinata HOM05D000620 ORTHO05D000537 3.8e-07 58.9 93 48.4
BolC4t26768H Brassica oleracea HOM05D000620 ORTHO05D000537 3.8e-07 58.9 93 48.4
EL10Ac6g13297 Beta vulgaris HOM05D000620 ORTHO05D000537 5.0e-07 58.5 111 44.1
CARHR293300 Cardamine hirsuta HOM05D000620 ORTHO05D000537 6.5e-07 58.2 122 38.5
Glyma.06G091651 Glycine max HOM05D000620 ORTHO05D000537 6.5e-07 58.2 116 37.1
GSVIVG01019190001 Vitis vinifera HOM05D000620 ORTHO05D000537 6.5e-07 58.2 88 47.7
PGR009G0005 Punica granatum HOM05D000620 ORTHO05D000537 1.1e-06 57.4 135 36.3
Glyma.04G089851 Glycine max HOM05D000620 ORTHO05D000537 1.4e-06 57.0 117 41.0
MSTRG.24418 Avicennia marina HOM05D000620 ORTHO05D000537 2.5e-06 56.2 100 38.0
AL4G12220 Arabidopsis lyrata HOM05D000620 ORTHO05D000537 3.2e-06 55.8 150 38.7
BolC7t46685H Brassica oleracea HOM05D000620 ORTHO05D000537 4.2e-06 55.5 83 47.0
C07p62710 Brassica napus HOM05D000620 ORTHO05D000537 5.5e-06 55.1 83 47.0
Sed0011559 Sechium edule HOM05D000620 ORTHO05D000537 5.5e-06 55.1 112 36.6
C04p51970 Brassica napus HOM05D000620 ORTHO05D000537 9.4e-06 54.3 95 45.3


User provided reference genes

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