Gene: COL.COLO4_35334

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_35334
  • Transcript Identifier COL.rna34023
  • Gene Type Coding gene
  • Location AWUE01022530.1 : 2121-4699 : positive

Gene Family Information

  • ID HOM05D000620
  • #Genes/#Species 922/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna34023
  • GenBank OMO57498.1
  • id gene35306
  • gene_name COLO4_35334
  • uniprot A0A1R3GHB7

Descriptions

  • Description Zinc finger, RING-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G49665
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT5G49665
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G49665

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT5G49665
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G49665

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G49665

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036465 von Willebrand factor A-like domain superfamily
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR002035 von Willebrand factor, type A
Mapman id Description
26.3.1.6 External stimuli response.gravity.sensing and signalling.ubiquitin protein ligase (WAV3)