Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 4.8e-155 551.2 297 100.0
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 2.2e-152 542.3 297 98.0
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 1.2e-105 387.1 301 69.8
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 3.9e-104 382.1 302 71.2
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 3.3e-103 379.0 293 71.3
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 1.2e-102 377.1 301 71.4
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 1.6e-102 376.7 296 71.3
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 1.1e-101 374.0 299 72.6
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 1.9e-98 363.2 302 69.9
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 7.1e-98 361.3 303 69.0
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 9.3e-98 360.9 298 68.1
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 1.6e-97 360.1 298 68.1
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 3.0e-96 355.9 290 68.6
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 6.6e-96 354.8 300 68.3
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 8.7e-96 354.4 302 67.5
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 1.6e-94 350.1 300 66.3
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 8.1e-94 347.8 301 67.4
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 8.1e-94 347.8 301 67.4
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 9.0e-93 344.4 306 65.7
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 3.4e-92 342.4 305 65.9
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 2.2e-91 339.7 274 68.2
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 2.9e-91 339.3 299 65.9
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 1.4e-90 337.0 283 66.8
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 3.2e-90 335.9 302 64.6
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 4.2e-90 335.5 288 66.3
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 9.3e-90 334.3 248 73.0
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 2.1e-89 333.2 281 66.2
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 3.5e-89 332.4 280 65.7
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 4.6e-89 332.0 284 66.2
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.0e-88 330.9 289 66.4
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 1.3e-88 330.5 299 65.9
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 8.7e-88 327.8 296 65.2
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 1.1e-87 327.4 300 63.0
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 3.3e-87 325.9 302 64.6
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 4.8e-86 322.0 286 66.1
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 4.8e-86 322.0 301 65.1
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 6.2e-86 321.6 288 64.6
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 1.1e-85 320.9 302 62.6
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 1.4e-85 320.5 301 64.8
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 2.4e-85 319.7 305 62.0
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 3.1e-85 319.3 296 63.9
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 9.0e-85 317.8 286 64.0
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 1.5e-84 317.0 314 60.8
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 2.6e-84 316.2 290 65.5
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 3.4e-84 315.8 286 63.6
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 4.5e-84 315.5 311 59.2
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 7.6e-84 314.7 297 62.3
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 9.9e-84 314.3 300 62.0
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 1.3e-83 313.9 289 65.1
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.9e-83 312.8 300 62.3
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 1.1e-82 310.8 289 61.2
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 1.1e-82 310.8 295 61.7
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 1.4e-82 310.5 301 60.5
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 1.4e-82 310.5 292 61.6
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 1.9e-82 310.1 264 67.0
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 1.9e-82 310.1 306 60.8
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 2.5e-82 309.7 294 62.6
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.5e-82 309.7 292 64.7
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 2.5e-82 309.7 284 64.1
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 4.2e-82 308.9 299 62.2
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 5.5e-82 308.5 294 62.6
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 7.1e-82 308.1 261 65.9
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 9.3e-82 307.8 282 64.5
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 2.1e-81 306.6 296 61.5
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 2.7e-81 306.2 295 62.4
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.7e-81 306.2 290 64.5
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 2.7e-81 306.2 299 61.5
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 3.5e-81 305.8 258 65.1
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 4.6e-81 305.4 296 62.2
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 6.0e-81 305.1 263 65.8
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 7.9e-81 304.7 287 63.4
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 7.9e-81 304.7 302 59.9
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 7.9e-81 304.7 302 59.9
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 7.9e-81 304.7 292 63.7
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 2.3e-80 303.1 245 70.2
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 3.0e-80 302.8 290 63.4
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 3.9e-80 302.4 258 66.3
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 3.9e-80 302.4 300 60.3
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.1e-80 302.0 300 60.3
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 5.1e-80 302.0 263 63.9
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 6.7e-80 301.6 255 66.3
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.9e-79 300.1 246 67.1
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 2.5e-79 299.7 294 61.2
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 2.5e-79 299.7 303 59.4
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 4.3e-79 298.9 294 60.5
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 5.6e-79 298.5 298 62.8
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 4.8e-78 295.4 296 61.1
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 8.2e-78 294.7 288 60.4
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.2e-78 294.7 285 61.1
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 1.1e-77 294.3 278 61.2
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 1.1e-77 294.3 290 61.0
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 2.4e-77 293.1 297 61.3
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.1e-77 292.7 285 60.4
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.1e-77 292.7 285 60.4
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 5.3e-77 292.0 263 65.0
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 9.0e-77 291.2 285 60.4
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 4.5e-76 288.9 291 60.1
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 4.5e-76 288.9 291 60.1
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 4.5e-76 288.9 263 64.6
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 4.5e-76 288.9 291 60.1
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.2e-75 286.6 306 56.5
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 4.9e-75 285.4 256 64.1
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 1.4e-74 283.9 294 57.1
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 1.4e-74 283.9 309 57.9
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 1.9e-74 283.5 306 54.6
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 1.9e-74 283.5 294 57.1
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 4.2e-74 282.3 268 60.8
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 7.1e-74 281.6 263 63.5
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 1.0e-72 277.7 263 62.4
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 1.8e-72 276.9 290 57.9
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 4.3e-71 272.3 281 57.3
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 5.7e-71 271.9 241 63.9
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 2.8e-70 269.6 278 59.4
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 2.0e-68 263.5 281 57.7
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 5.9e-68 261.9 294 56.1
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 2.2e-67 260.0 294 55.8
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 2.2e-67 260.0 287 54.7
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.9e-67 259.6 288 56.6
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 7.2e-66 255.0 296 55.1
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 9.4e-66 254.6 289 55.7
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.6e-65 253.8 291 54.3
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 2.7e-65 253.1 251 58.2
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 3.6e-65 252.7 301 53.2
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 5.1e-64 248.8 293 54.3
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 2.0e-63 246.9 290 54.8
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.7e-62 242.7 191 68.1
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 5.3e-61 238.8 298 52.3
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.2e-59 233.4 275 53.8
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 2.2e-59 233.4 260 54.6
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 5.0e-59 232.3 294 52.0
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.1e-58 231.1 282 53.5
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 5.5e-58 228.8 211 64.9
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 7.9e-57 224.9 233 55.8
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 1.0e-56 224.6 247 55.5
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 2.2e-54 216.9 210 60.5
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 1.1e-53 214.5 272 48.9
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 4.5e-52 209.1 268 50.7
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 9.4e-50 201.4 289 49.1
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 7.4e-47 191.8 321 46.4
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 1.4e-45 187.6 270 46.7
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 7.0e-45 185.3 168 66.7
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.1e-42 177.9 183 62.3
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 3.2e-42 176.4 277 43.3
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 7.2e-42 175.3 155 61.9
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 9.4e-42 174.9 167 59.9
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 8.0e-41 171.8 283 43.1
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 8.0e-41 171.8 160 66.2
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 8.0e-41 171.8 160 66.2
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.0e-40 169.9 150 64.7
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 1.5e-39 167.5 283 41.3
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 4.4e-39 166.0 187 53.5
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 5.7e-39 165.6 162 58.6
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 1.1e-37 161.4 148 57.4
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 7.0e-37 158.7 249 39.8
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 2.7e-36 156.8 288 40.3
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 2.2e-35 153.7 275 39.6
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 3.8e-35 152.9 186 52.2
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 1.5e-34 151.0 190 53.7
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 1.9e-34 150.6 262 40.1
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 7.2e-34 148.7 139 55.4
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 1.7e-30 137.5 249 40.6
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 1.7e-30 137.5 206 46.1
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.1e-26 124.8 154 53.9
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.0e-24 118.2 163 51.5
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 3.0e-24 116.7 80 73.8
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 7.5e-23 112.1 195 43.6
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 2.4e-21 107.1 72 76.4
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 7.8e-20 102.1 154 46.1
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 7.8e-20 102.1 83 73.5
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 5.0e-19 99.4 154 47.4
CDE08G0595 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 5.6e-18 95.9 112 56.2
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 7.3e-18 95.5 297 31.6
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.6e-17 93.2 74 63.5
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.1e-16 90.1 149 47.0
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 3.1e-16 90.1 277 33.2
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 8.3e-14 82.0 92 55.4
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 1.1e-13 81.6 59 71.2
Dinv10307 Davidia involucrata HOM05D003921 ORTHO05D004394 7.0e-13 79.0 48 83.3
DCAR_018080 Daucus carota HOM05D002169 ORTHO05D018172 2.8e-09 67.0 101 44.6
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 4.7e-09 66.2 60 56.7
Prupe.2G115400 Prunus persica HOM05D003921 ORTHO05D004394 6.8e-08 62.4 60 65.0


User provided reference genes

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