Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 6.5e-122 440.7 211 100.0
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 2.7e-107 392.1 194 95.9
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.5e-97 359.8 212 82.5
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 6.4e-93 344.4 193 82.9
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 7.8e-91 337.4 193 80.3
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 5.2e-87 324.7 195 77.4
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 5.2e-87 324.7 193 77.7
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 2.0e-86 322.8 212 71.2
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 2.4e-84 315.8 211 72.5
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 2.3e-82 309.3 210 69.0
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 2.3e-82 309.3 210 69.0
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 5.1e-82 308.1 212 70.3
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 2.8e-80 302.4 193 72.0
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.4e-79 300.1 193 72.5
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 4.0e-79 298.5 212 69.3
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 5.2e-79 298.1 196 72.4
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 5.2e-79 298.1 211 68.2
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 2.0e-78 296.2 211 67.8
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 3.8e-77 292.0 193 71.0
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 8.4e-77 290.8 192 68.8
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.4e-76 290.0 212 67.5
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 3.2e-76 288.9 193 71.5
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 3.2e-76 288.9 192 67.7
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 4.2e-76 288.5 193 72.0
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 4.2e-76 288.5 188 73.4
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 5.4e-76 288.1 212 67.0
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 7.1e-76 287.7 191 69.1
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 7.1e-76 287.7 193 71.0
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 9.3e-76 287.3 193 70.5
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.2e-75 287.0 210 65.2
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 1.6e-75 286.6 211 62.6
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.6e-75 286.6 212 63.2
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.6e-75 286.6 195 68.2
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 6.0e-75 284.6 191 68.6
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 7.8e-75 284.3 199 70.4
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 7.8e-75 284.3 212 64.6
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 2.3e-74 282.7 210 65.7
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 3.0e-74 282.3 198 67.7
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 3.9e-74 282.0 181 69.6
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 4.3e-73 278.5 211 64.5
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 5.6e-73 278.1 211 61.1
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 7.3e-73 277.7 210 64.8
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.6e-72 276.6 195 65.6
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.6e-72 275.4 210 63.8
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 6.2e-72 274.6 194 66.5
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 1.1e-71 273.9 200 63.0
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.4e-71 273.5 212 61.3
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 2.4e-71 272.7 197 65.5
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 6.9e-71 271.2 210 64.8
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 6.9e-71 271.2 189 65.1
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 9.0e-71 270.8 210 64.8
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 9.0e-71 270.8 211 59.7
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.5e-70 270.0 196 61.7
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 3.4e-70 268.9 192 66.1
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.4e-70 268.5 189 65.1
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 7.6e-70 267.7 198 62.1
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 9.9e-70 267.3 174 69.0
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.3e-69 266.9 210 58.1
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.3e-69 266.9 212 60.4
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 4.9e-69 265.0 168 70.8
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 4.9e-69 265.0 180 66.1
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 6.4e-69 264.6 173 69.4
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 1.1e-68 263.8 172 69.8
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 2.4e-68 262.7 198 63.6
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 2.4e-68 262.7 174 68.4
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 3.2e-68 262.3 197 65.0
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 6.0e-67 258.1 211 60.7
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 7.9e-67 257.7 180 66.1
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 6.2e-64 248.1 160 70.0
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.1e-63 247.3 213 57.3
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.1e-63 247.3 157 72.0
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.1e-63 247.3 179 63.1
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.8e-63 246.5 211 56.4
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 9.0e-63 244.2 188 61.7
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.0e-62 243.0 160 71.2
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 4.5e-62 241.9 213 55.9
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 4.5e-62 241.9 178 64.0
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 4.5e-62 241.9 179 62.6
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 3.8e-61 238.8 213 54.9
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.9e-60 236.5 213 54.5
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.6e-59 233.4 159 67.3
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 2.7e-59 232.6 191 56.0
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 4.6e-59 231.9 171 63.7
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 4.6e-59 231.9 171 63.7
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 4.6e-59 231.9 171 63.7
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.3e-58 230.3 152 67.8
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 1.6e-56 223.4 213 52.6
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.6e-56 223.4 144 71.5
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 2.6e-54 216.1 155 65.8
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 2.5e-52 209.5 137 68.6
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 9.3e-52 207.6 161 61.5
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.1e-47 192.2 134 64.2
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 1.5e-46 190.3 167 52.1
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 1.2e-43 180.6 152 53.3
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.9e-41 173.3 134 53.7
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 2.0e-38 163.3 143 49.7
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.7e-37 160.2 143 57.3
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 3.6e-35 152.5 133 54.9
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 3.9e-34 149.1 182 41.2
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 5.1e-34 148.7 152 46.1
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 6.7e-34 148.3 133 54.9
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.9e-29 132.9 82 73.2
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 4.4e-25 119.0 145 37.9
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.7e-21 107.1 173 37.6
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 1.1e-20 104.4 52 82.7
Haze_07210 Corylus avellana HOM05D004747 ORTHO05D164832 5.7e-17 92.0 45 95.6
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.8e-16 89.7 54 79.6
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 7.7e-14 81.6 44 84.1


User provided reference genes

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