Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15850 Corylus avellana HOM05D000911 ORTHO05D164844 8.2e-85 317.0 159 100.0
Haze_06809 Corylus avellana HOM05D000911 ORTHO05D000890 3.3e-09 65.9 118 38.1
CiPaw.09G092800 Carya illinoinensis HOM05D000911 ORTHO05D000890 2.4e-07 59.7 132 34.1
Sed0008413 Sechium edule HOM05D000911 ORTHO05D000890 2.4e-07 59.7 134 32.1
DCAR_012164 Daucus carota HOM05D000911 ORTHO05D000890 3.1e-07 59.3 134 32.8
Prupe.6G119200 Prunus persica HOM05D000911 ORTHO05D000890 4.0e-07 58.9 134 32.8
PGR042G1139 Punica granatum HOM05D000911 ORTHO05D000890 4.0e-07 58.9 132 33.3
Glyma.11G189100 Glycine max HOM05D000911 ORTHO05D000890 5.3e-07 58.5 133 33.1
Lj1A1231T40 Lonicera japonica HOM05D000911 ORTHO05D000890 5.3e-07 58.5 133 33.1
SalBow6G3603 Salvia bowleyana HOM05D000911 ORTHO05D000890 5.3e-07 58.5 105 36.2
MBI17_g11083_MAGBIO Magnolia biondii HOM05D000911 ORTHO05D000890 6.9e-07 58.2 134 32.1
BcaC02g08227 Brassica carinata HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 33.6
A04p21160 Brassica napus HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 33.6
A10p18290 Brassica napus HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 30.6
C04p56990 Brassica napus HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 33.6
BolC4t27234H Brassica oleracea HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 33.6
BraA10t43905Z Brassica rapa HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 30.6
Carub.0001s0760 Capsella rubella HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 33.6
Duzib150G0263 Durio zibethinus HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 32.1
Mapoly0071s0057 Marchantia polymorpha HOM05D000911 ORTHO05D000890 9.0e-07 57.8 132 31.8
HPP92_006428 Vanilla planifolia HOM05D000911 ORTHO05D000890 9.0e-07 57.8 134 32.8
AT1G08250 Arabidopsis thaliana HOM05D000911 ORTHO05D000890 1.2e-06 57.4 134 32.8
CARHR120520 Cardamine hirsuta HOM05D000911 ORTHO05D000890 1.2e-06 57.4 134 33.6
Glyma.12G085500 Glycine max HOM05D000911 ORTHO05D000890 1.2e-06 57.4 134 32.8
HanXRQChr07g0197751 Helianthus annuus HOM05D000911 ORTHO05D000890 1.2e-06 57.4 134 32.8
PGR102G2180 Punica granatum HOM05D000911 ORTHO05D000890 1.2e-06 57.4 134 30.6
TAR369G0717 Trochodendron aralioides HOM05D000911 ORTHO05D000890 1.2e-06 57.4 135 32.6
TAR627G0123 Trochodendron aralioides HOM05D000911 ORTHO05D000890 1.2e-06 57.4 132 32.6
C08p50070 Brassica napus HOM05D000911 ORTHO05D000890 1.5e-06 57.0 134 32.8
BolC8t52538H Brassica oleracea HOM05D000911 ORTHO05D000890 1.5e-06 57.0 134 32.8
MELO3C004797.2 Cucumis melo HOM05D000911 ORTHO05D000890 1.5e-06 57.0 136 30.1
Glyma.17G012600 Glycine max HOM05D000911 ORTHO05D000890 1.5e-06 57.0 132 34.1
Lalb_Chr13g0304271 Lupinus albus HOM05D000911 ORTHO05D000890 1.5e-06 57.0 132 34.8
MD10G1322400 Malus domestica HOM05D000911 ORTHO05D000890 1.5e-06 57.0 132 34.1
SalBow3G3228 Salvia bowleyana HOM05D000911 ORTHO05D000890 1.5e-06 57.0 105 36.2
AL4G22440 Arabidopsis lyrata HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 32.8
AT2G27820 Arabidopsis thaliana HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 32.8
BraA02t05670Z Brassica rapa HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 29.9
Ca_21079_v3 Cicer arietinum L. HOM05D000911 ORTHO05D000890 2.0e-06 56.6 132 32.6
Ciclev10028359m.g Citrus clementina HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 31.3
Eucgr.E04043 Eucalyptus grandis HOM05D000911 ORTHO05D000890 2.0e-06 56.6 132 33.3
Thhalv10016681m.g Eutrema salsugineum HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 32.8
Manes.11G157300 Manihot esculenta HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 30.6
Oeu008383.1 Olea europaea HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 30.6
Sp4g10660 Schrenkiella parvula HOM05D000911 ORTHO05D000890 2.0e-06 56.6 134 32.8
Aa31LG1G12990 Aethionema arabicum HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 29.9
BcaC03g13901 Brassica carinata HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 29.9
BcaC07g42520 Brassica carinata HOM05D000911 ORTHO05D000890 2.6e-06 56.2 135 32.6
C02p11060 Brassica napus HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 29.9
BraA04t17685Z Brassica rapa HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 32.8
CAN.G919.8 Capsicum annuum HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 31.3
Ciclev10015131m.g Citrus clementina HOM05D000911 ORTHO05D000890 2.6e-06 56.2 130 34.6
COL.COLO4_31788 Corchorus olitorius HOM05D000911 ORTHO05D000890 2.6e-06 56.2 132 31.1
CsaV3_1G014500 Cucumis sativus L. HOM05D000911 ORTHO05D000890 2.6e-06 56.2 137 32.1
CsaV3_1G014510 Cucumis sativus L. HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 32.1
MD03G1134800 Malus domestica HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 32.1
MD11G1157600 Malus domestica HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 32.1
PSO339G4288 Papaver somniferum HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 30.6
PSO384G2796 Papaver somniferum HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 30.6
Sed0004114 Sechium edule HOM05D000911 ORTHO05D000890 2.6e-06 56.2 132 32.6
Solyc06g074530.1 Solanum lycopersicum HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 31.3
Sopen06g031000 Solanum pennellii HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 31.3
PGSC0003DMG400007122 Solanum tuberosum HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 31.3
TWI79G1336 Tripterygium wilfordii HOM05D000911 ORTHO05D000890 2.6e-06 56.2 134 30.6
Aa31LG4G14320 Aethionema arabicum HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 29.9
BcaB05g22716 Brassica carinata HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 29.9
BcaB08g36413 Brassica carinata HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 29.9
BcaC04g19593 Brassica carinata HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 29.9
BcaC07g41954 Brassica carinata HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 32.8
C09p53940 Brassica napus HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 29.9
BolC9t58266H Brassica oleracea HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 29.9
Carub.0004s0858 Capsella rubella HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 32.8
CiPaw.10G071800 Carya illinoinensis HOM05D000911 ORTHO05D000890 3.4e-06 55.8 132 31.8
Migut.M01327 Erythranthe guttata HOM05D000911 ORTHO05D000890 3.4e-06 55.8 132 33.3
Manes.17G026400 Manihot esculenta HOM05D000911 ORTHO05D000890 3.4e-06 55.8 132 33.3
Nn2g14008 Nelumbo nucifera HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 31.3
Phvul.011G090400 Phaseolus vulgaris HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 32.1
PGR042G3273 Punica granatum HOM05D000911 ORTHO05D000890 3.4e-06 55.8 132 34.1
SHI02210 Sapria himalayana HOM05D000911 ORTHO05D000890 3.4e-06 55.8 132 31.1
Sc21g0004720 Simmondsia chinensis HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 30.6
THA.LOC104815732 Tarenaya hassleriana HOM05D000911 ORTHO05D000890 3.4e-06 55.8 134 32.1
Actinidia24180 Actinidia chinensis HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 29.9
AL6G33660 Arabidopsis lyrata HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 29.9
AT5G22630 Arabidopsis thaliana HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 29.9
A09p65960 Brassica napus HOM05D000911 ORTHO05D000566 4.5e-06 55.5 134 32.1
CARHR008080 Cardamine hirsuta HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 32.8
CARHR151470 Cardamine hirsuta HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 30.6
CARHR190950 Cardamine hirsuta HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 29.9
Duzib170G0813 Durio zibethinus HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 30.6
Thhalv10016085m.g Eutrema salsugineum HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 29.9
Glyma.13G319000 Glycine max HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 31.3
Gohir.A08G003600 Gossypium hirsutum HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 30.6
Lalb_Chr22g0350651 Lupinus albus HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 31.3
Os04g0406600 Oryza sativa ssp. japonica HOM05D000911 ORTHO05D000890 4.5e-06 55.5 135 32.6
PSO339G2411 Papaver somniferum HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 31.3
PSO339G4615 Papaver somniferum HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 31.3
PSO384G4227 Papaver somniferum HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 31.3
Rhsim13G0105200 Rhododendron simsii HOM05D000911 ORTHO05D000890 4.5e-06 55.5 120 34.2
RcHm_v2.0_Chr5g0002851 Rosa chinensis HOM05D000911 ORTHO05D000890 4.5e-06 55.5 132 31.8
Sp6g22710 Schrenkiella parvula HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 29.9
TAR623G1128 Trochodendron aralioides HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 31.3
Zm00001eb084260 Zea mays HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 32.1
Zm00001eb096110 Zea mays HOM05D000911 ORTHO05D000890 4.5e-06 55.5 134 32.8
MSTRG.7203 Avicennia marina HOM05D000911 ORTHO05D000890 5.8e-06 55.1 132 34.1
BNapus_Darmor_BZH_scaffold_38p00530 Brassica napus HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 29.9
BolC2t07178H Brassica oleracea HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 29.9
CSS0032292 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 30.6
ECA238G1784 Erigeron canadensis HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 31.3
FvH4_3g01940 Fragaria vesca HOM05D000911 ORTHO05D000890 5.8e-06 55.1 132 33.3
FAN21G3155 Fragaria x ananassa HOM05D000911 ORTHO05D000890 5.8e-06 55.1 132 33.3
FAN25G3392 Fragaria x ananassa HOM05D000911 ORTHO05D000890 5.8e-06 55.1 132 33.3
Glyma.12G181800 Glycine max HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 31.3
MD05G1348000 Malus domestica HOM05D000911 ORTHO05D000890 5.8e-06 55.1 132 32.6
Manes.04G008400 Manihot esculenta HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 30.6
Nn6g35041 Nelumbo nucifera HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 31.3
Os09g0565700 Oryza sativa ssp. japonica HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 32.8
Os09g0566050 Oryza sativa ssp. japonica HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 32.8
Potri.004G188100 Populus trichocarpa HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 30.6
Potri.009G148800 Populus trichocarpa HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 30.6
Sabra04G0127000 Salix brachista HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 30.6
Solyc11g066890.1 Solanum lycopersicum HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 29.9
Sopen11g026600 Solanum pennellii HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 29.9
VMungo1127G2099 Vigna mungo HOM05D000911 ORTHO05D000890 5.8e-06 55.1 134 32.1
Carub.0006s2035 Capsella rubella HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 29.1
CDE08G0576 Ceratophyllum demersum HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 31.3
COL.COLO4_19302 Corchorus olitorius HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 29.9
Eucgr.J00428 Eucalyptus grandis HOM05D000911 ORTHO05D000890 7.6e-06 54.7 135 30.4
Gohir.A09G093300 Gossypium hirsutum HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 30.6
Gohir.D09G093100 Gossypium hirsutum HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 30.6
Gorai.006G109800 Gossypium raimondii HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 30.6
Medtr2g084875 Medicago truncatula HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 31.3
Peaxi162Scf00114g00001 Petunia axillaris HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 29.9
Psat5g255680 Pisum sativum HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 30.6
Prupe.4G019500 Prunus persica HOM05D000911 ORTHO05D000890 7.6e-06 54.7 132 32.6
SalBow8G2592 Salvia bowleyana HOM05D000911 ORTHO05D000890 7.6e-06 54.7 180 29.4
THA.LOC104800556 Tarenaya hassleriana HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 32.1
Thecc.09G291400 Theobroma cacao HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 30.6
Zm00001eb421790 Zea mays HOM05D000911 ORTHO05D000890 7.6e-06 54.7 134 32.8
Ah.01g016830 Amaranthus hybridus HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 31.3
arahy.Tifrunner.gnm1.ann1.A5D6C6 Arachis hypogaea HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 30.6
Ca_01677_v3 Cicer arietinum L. HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 30.6
Ca_19373_v3 Cicer arietinum L. HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 31.3
ECA248G1242 Erigeron canadensis HOM05D000911 ORTHO05D000890 9.9e-06 54.3 133 32.3
HanXRQChr14g0452001 Helianthus annuus HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 31.3
Lsat_1_v5_gn_2_95461 Lactuca sativa HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 31.3
Nitab4.5_0002827g0090 Nicotiana tabacum HOM05D000911 ORTHO05D000890 9.9e-06 54.3 132 33.3
Oeu025271.1 Olea europaea HOM05D000911 ORTHO05D000890 9.9e-06 54.3 132 32.6
Peaxi162Scf00002g00514 Petunia axillaris HOM05D000911 ORTHO05D000890 9.9e-06 54.3 135 31.9
Sp5g16460 Schrenkiella parvula HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 29.9
Hund00774 Selenicereus undatus HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 32.1
Hund07682 Selenicereus undatus HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 31.3
PGSC0003DMG400026536 Solanum tuberosum HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 29.9
TWI31G0755 Tripterygium wilfordii HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 30.6
VMungo1080G0390 Vigna mungo HOM05D000911 ORTHO05D000890 9.9e-06 54.3 134 31.3


User provided reference genes

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