Gene: COL.COLO4_19302
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_19302
- Transcript Identifier COL.rna18065
- Gene Type Coding gene
- Location AWUE01016579.1 : 86364-87650 : negative
Gene Family Information
- ID HOM05D000911
- #Genes/#Species 657/100
- Phylogenetic origin
- ID ORTHO05D000890
- #Genes/#Species 568/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna18065
- GenBank OMO90222.1
- id gene19274
- gene_name COLO4_19302
- uniprot A0A1R3J5Y7
Descriptions
- Description Prephenate dehydratase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009094 | IEA | GOA Database | L-phenylalanine biosynthetic process | |
| GO:0009094 | IEA | InterPro | L-phenylalanine biosynthetic process | |
| GO:0008652 | IEA | GOA Database | cellular amino acid biosynthetic process | |
| GO:0009073 | IEA | GOA Database | aromatic amino acid family biosynthetic process | |
| GO:0006571 | ISO | PLAZA Integrative Orthology | tyrosine biosynthetic process | AT2G27820 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT2G27820 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT5G22630 |
| GO:0010244 | ISO | PLAZA Integrative Orthology | response to low fluence blue light stimulus by blue low-fluence system | AT2G27820 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0047769 | IEA | GOA Database | arogenate dehydratase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0004664 | IEA | GOA Database | prephenate dehydratase activity | |
| GO:0004664 | IEA | InterPro | prephenate dehydratase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | IEA | GOA Database | chloroplast stroma | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G27820 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001086 | Prephenate dehydratase |
| Mapman id | Description |
|---|---|
| 4.1.5.2.4 | Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) |