Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 1.2e-147 526.6 279 100.0
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 8.5e-53 211.5 136 76.5
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 3.0e-50 203.0 135 76.3
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 3.4e-41 172.9 136 62.5
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 4.4e-41 172.6 139 59.7
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 9.8e-41 171.4 139 59.7
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 1.8e-39 167.2 146 56.8
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 1.6e-38 164.1 132 62.1
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 1.6e-38 164.1 132 62.1
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.0e-38 163.7 129 62.8
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 5.9e-38 162.2 129 62.0
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.9e-37 159.8 129 59.7
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 2.9e-37 159.8 131 61.1
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.9e-37 159.8 131 61.1
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 3.8e-37 159.5 134 57.5
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 3.8e-37 159.5 129 62.0
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 8.6e-37 158.3 134 57.5
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.1e-36 157.9 129 58.1
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.5e-36 157.5 134 57.5
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 1.9e-36 157.1 134 56.7
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 1.9e-36 157.1 136 55.1
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.5e-36 156.8 131 59.5
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 4.3e-36 156.0 136 55.1
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 7.3e-36 155.2 126 61.9
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 9.5e-36 154.8 132 56.8
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 9.5e-36 154.8 132 56.8
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 1.2e-35 154.5 130 56.9
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 1.6e-35 154.1 134 57.5
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 2.1e-35 153.7 134 56.7
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 3.6e-35 152.9 136 55.9
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 4.7e-35 152.5 132 55.3
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 6.1e-35 152.1 129 59.7
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 1.0e-34 151.4 129 56.6
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 1.4e-34 151.0 129 58.9
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 2.3e-34 150.2 129 58.9
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 3.0e-34 149.8 123 62.6
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 4.0e-34 149.4 129 57.4
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 6.8e-34 148.7 139 55.4
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.2e-33 147.9 133 54.9
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 2.0e-33 147.1 129 58.1
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 4.4e-33 146.0 121 59.5
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.4e-33 146.0 136 55.9
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 5.7e-33 145.6 130 56.9
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 5.7e-33 145.6 131 55.0
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 5.7e-33 145.6 133 54.1
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 1.3e-32 144.4 136 55.1
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 1.7e-32 144.1 125 59.2
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.7e-32 144.1 132 56.1
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 1.7e-32 144.1 136 55.1
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 1.7e-32 144.1 125 57.6
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 1.7e-32 144.1 131 54.2
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 2.2e-32 143.7 121 58.7
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 2.9e-32 143.3 113 61.1
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 3.7e-32 142.9 131 51.9
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 4.9e-32 142.5 131 58.0
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 6.4e-32 142.1 116 59.5
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 8.3e-32 141.7 128 54.7
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 3.2e-31 139.8 136 53.7
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 3.2e-31 139.8 125 57.6
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 9.2e-31 138.3 137 51.8
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.6e-30 137.5 132 53.8
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 2.7e-30 136.7 136 49.3
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 3.5e-30 136.3 131 51.9
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 3.5e-30 136.3 129 53.5
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 3.5e-30 136.3 130 52.3
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 7.8e-30 135.2 117 57.3
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.0e-29 134.8 136 52.2
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 3.9e-29 132.9 129 51.9
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 6.6e-29 132.1 132 50.0
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 8.6e-29 131.7 132 48.5
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 8.6e-29 131.7 129 51.9
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.5e-28 131.0 133 48.9
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.5e-28 131.0 129 54.3
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 4.3e-28 129.4 131 51.9
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 5.6e-28 129.0 131 50.4
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 3.6e-27 126.3 134 48.5
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 3.6e-27 126.3 121 52.1
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 4.0e-26 122.9 114 54.4
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 8.9e-26 121.7 117 56.4
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.2e-25 121.3 140 45.0
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.2e-25 121.3 130 47.7
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.5e-25 120.9 126 47.6
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.0e-25 120.6 126 46.8
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.0e-25 120.6 126 46.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.0e-25 120.6 127 44.9
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 2.6e-25 120.2 128 45.3
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 4.4e-25 119.4 127 44.1
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 4.4e-25 119.4 127 44.1
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 4.4e-25 119.4 96 57.3
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 4.4e-25 119.4 117 50.4
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 5.8e-25 119.0 127 44.9
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 5.8e-25 119.0 130 46.2
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 9.8e-25 118.2 127 43.3
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 1.3e-24 117.9 125 44.8
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 1.3e-24 117.9 93 55.9
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 2.2e-24 117.1 125 43.2
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 2.2e-24 117.1 125 43.2
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 2.2e-24 117.1 125 43.2
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 2.2e-24 117.1 126 44.4
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 2.2e-24 117.1 136 44.9
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 6.4e-24 115.5 127 43.3
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 1.4e-23 114.4 126 44.4
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 1.9e-23 114.0 125 44.0
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 1.9e-23 114.0 125 44.0
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 3.2e-23 113.2 131 46.6
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 4.1e-23 112.8 118 47.5
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 7.0e-23 112.1 114 45.6
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 1.6e-22 110.9 126 42.9
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.0e-22 110.5 136 42.6
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 2.7e-22 110.2 136 41.2
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 4.6e-22 109.4 135 44.4
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.3e-21 107.8 129 40.3
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 2.3e-21 107.1 127 42.5
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 3.0e-21 106.7 87 57.5
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 5.0e-21 105.9 83 59.0
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 3.3e-20 103.2 86 59.3
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 5.6e-20 102.4 88 56.8
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 5.6e-20 102.4 121 47.1
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 9.5e-20 101.7 187 33.7
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 2.1e-19 100.5 146 36.3
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 2.8e-19 100.1 104 46.2
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 2.8e-19 100.1 88 55.7
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 2.8e-19 100.1 130 36.9
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 4.7e-19 99.4 165 35.2
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 8.1e-19 98.6 103 46.6
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 1.8e-18 97.4 103 45.6
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 2.0e-17 94.0 143 37.8
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 7.5e-17 92.0 88 51.1
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 8.3e-16 88.6 141 34.0
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 2.1e-14 84.0 104 41.3
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.1e-14 84.0 64 64.1
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 2.1e-14 84.0 129 38.0
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 4.0e-10 69.7 86 41.9
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 4.0e-10 69.7 86 41.9
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 1.5e-09 67.8 125 31.2
arahy.Tifrunner.gnm1.ann1.QWX0VP Arachis hypogaea HOM05D003469 ORTHO05D004084 1.9e-07 60.8 106 36.8
PRCOL_00004204 Prasinoderma coloniale HOM05D003469 ORTHO05D004084 1.2e-06 58.2 110 31.8


User provided reference genes

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