Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13536 Corylus avellana HOM05D005309 ORTHO05D006648 3.2e-147 525.0 258 100.0
Cfa023077 Carpinus fangiana HOM05D005309 ORTHO05D006648 7.0e-126 454.1 228 96.5
CiPaw.04G138300 Carya illinoinensis HOM05D005309 ORTHO05D006648 2.7e-109 399.1 253 75.5
Dinv18821 Davidia involucrata HOM05D005309 ORTHO05D006648 2.2e-87 326.2 262 64.5
Sed0027803 Sechium edule HOM05D005309 ORTHO05D006648 8.1e-82 307.8 255 62.4
CSS0009662 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 3.1e-81 305.8 226 65.9
CSS0016258 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 1.2e-80 303.9 226 65.5
Thecc.01G169500 Theobroma cacao HOM05D005309 ORTHO05D006648 1.2e-80 303.9 257 61.1
CANSAT64G0469 Cannabis sativa HOM05D005309 ORTHO05D006648 3.4e-80 302.4 261 59.4
ClCG11G016530 Citrullus lanatus HOM05D005309 ORTHO05D006648 3.4e-80 302.4 230 66.5
CsaV3_4G031990 Cucumis sativus L. HOM05D005309 ORTHO05D006648 5.8e-80 301.6 255 63.9
TWI23G0800 Tripterygium wilfordii HOM05D005309 ORTHO05D006648 1.7e-79 300.1 262 61.1
TAR627G0226 Trochodendron aralioides HOM05D005309 ORTHO05D006648 2.9e-79 299.3 262 60.3
Duzib133G0867 Durio zibethinus HOM05D005309 ORTHO05D006648 6.4e-79 298.1 254 62.2
Ciclev10031016m.g Citrus clementina HOM05D005309 ORTHO05D006648 7.1e-78 294.7 258 61.2
Atru.chr6.2050 Acer truncatum HOM05D005309 ORTHO05D006648 2.1e-77 293.1 226 64.2
Manes.02G208560 Manihot esculenta HOM05D005309 ORTHO05D006648 4.6e-77 292.0 261 58.6
Actinidia11207 Actinidia chinensis HOM05D005309 ORTHO05D006648 2.5e-75 286.2 230 62.2
Gohir.A11G157100 Gossypium hirsutum HOM05D005309 ORTHO05D006648 4.3e-75 285.4 260 57.7
Hma1.2p1_0147F.1_g065830 Hydrangea macrophylla HOM05D005309 ORTHO05D006648 5.6e-75 285.0 262 59.5
MELO3C022960.2 Cucumis melo HOM05D005309 ORTHO05D006648 7.3e-75 284.6 229 62.9
Gohir.D11G164100 Gossypium hirsutum HOM05D005309 ORTHO05D006648 1.3e-74 283.9 262 57.3
MSTRG.14909 Avicennia marina HOM05D005309 ORTHO05D006648 1.6e-74 283.5 257 61.1
Gorai.007G174900 Gossypium raimondii HOM05D005309 ORTHO05D006648 1.6e-74 283.5 262 57.3
Solyc07g045070.3 Solanum lycopersicum HOM05D005309 ORTHO05D006648 3.6e-74 282.3 253 59.7
Potri.005G204900 Populus trichocarpa HOM05D005309 ORTHO05D006648 6.2e-74 281.6 253 59.3
PGSC0003DMG400017390 Solanum tuberosum HOM05D005309 ORTHO05D006648 8.1e-74 281.2 253 59.3
Sopen07g023630 Solanum pennellii HOM05D005309 ORTHO05D006648 1.4e-73 280.4 253 59.3
Hma1.2p1_0147F.1_g065840 Hydrangea macrophylla HOM05D005309 ORTHO05D006648 4.0e-73 278.9 233 62.7
Eucgr.K01225 Eucalyptus grandis HOM05D005309 ORTHO05D006648 6.9e-73 278.1 268 57.8
Rhsim12G0010200 Rhododendron simsii HOM05D005309 ORTHO05D006648 6.9e-73 278.1 260 56.5
Sabra05G0155700 Salix brachista HOM05D005309 ORTHO05D006648 9.0e-73 277.7 255 59.2
GSVIVG01020840001 Vitis vinifera HOM05D005309 ORTHO05D006648 1.5e-72 276.9 226 61.9
SalBow7G0619 Salvia bowleyana HOM05D005309 ORTHO05D006648 2.0e-72 276.6 230 63.5
Nitab4.5_0005142g0010 Nicotiana tabacum HOM05D005309 ORTHO05D006648 5.8e-72 275.0 226 64.2
Migut.M00059 Erythranthe guttata HOM05D005309 ORTHO05D006648 1.4e-70 270.4 255 57.3
Lj1A593G32 Lonicera japonica HOM05D005309 ORTHO05D006648 1.9e-70 270.0 225 62.2
PGR142G1004 Punica granatum HOM05D005309 ORTHO05D006648 2.4e-70 269.6 256 56.6
Nn3g20733 Nelumbo nucifera HOM05D005309 ORTHO05D006648 3.2e-70 269.2 253 57.7
Oeu029978.1 Olea europaea HOM05D005309 ORTHO05D006648 3.2e-70 269.2 232 60.3
QL11p000196 Quercus lobata HOM05D005309 ORTHO05D006648 1.2e-69 267.3 274 55.8
Cc05_g01700 Coffea canephora HOM05D005309 ORTHO05D006648 2.7e-69 266.2 222 61.7
Aqoxy4G00092 Aquilegia oxysepala HOM05D005309 ORTHO05D006648 2.3e-68 263.1 260 55.0
PSO384G0241 Papaver somniferum HOM05D005309 ORTHO05D006648 3.0e-68 262.7 233 60.1
ECA234G1968 Erigeron canadensis HOM05D005309 ORTHO05D006648 7.3e-67 258.1 226 57.1
HanXRQChr01g0028511 Helianthus annuus HOM05D005309 ORTHO05D006648 7.3e-67 258.1 262 53.8
CAN.G275.11 Capsicum annuum HOM05D005309 ORTHO05D006648 1.6e-66 256.9 253 54.9
Cpa.g.sc50.107 Carica papaya HOM05D005309 ORTHO05D006648 4.8e-66 255.4 226 58.0
THA.LOC104826242 Tarenaya hassleriana HOM05D005309 ORTHO05D006648 1.1e-65 254.2 235 57.0
Glyma.14G030100 Glycine max HOM05D005309 ORTHO05D006648 1.8e-65 253.4 258 55.8
DCAR_016942 Daucus carota HOM05D005309 ORTHO05D006648 5.3e-65 251.9 253 53.0
vmacro08733 Vaccinium macrocarpon HOM05D005309 ORTHO05D006648 5.3e-65 251.9 348 42.8
Prupe.3G177300 Prunus persica HOM05D005309 ORTHO05D006648 1.2e-64 250.8 253 54.5
CDE02G3568 Ceratophyllum demersum HOM05D005309 ORTHO05D006648 2.0e-64 250.0 231 55.8
Hund02144 Selenicereus undatus HOM05D005309 ORTHO05D006648 2.6e-64 249.6 240 57.1
SGA_v2.0_scaffold73G24489 Striga asiatica HOM05D005309 ORTHO05D006648 2.6e-64 249.6 239 55.6
arahy.Tifrunner.gnm1.ann1.9TU2QX Arachis hypogaea HOM05D005309 ORTHO05D006648 3.4e-64 249.2 268 52.6
Peaxi162Scf00359g00710 Petunia axillaris HOM05D005309 ORTHO05D006648 4.5e-64 248.8 235 58.7
TPR.G10159 Trifolium pratense HOM05D005309 ORTHO05D006648 7.6e-64 248.1 271 52.8
unitig_899.g15343 Utricularia gibba HOM05D005309 ORTHO05D006648 7.6e-64 248.1 229 58.1
AUR62012368 Chenopodium quinoa HOM05D005309 ORTHO05D006648 9.9e-64 247.7 237 56.1
arahy.Tifrunner.gnm1.ann1.JRP0UJ Arachis hypogaea HOM05D005309 ORTHO05D006648 4.9e-63 245.4 268 51.5
AUR62031496 Chenopodium quinoa HOM05D000026 ORTHO05D007846 4.9e-63 245.4 235 55.3
Phvul.008G194100 Phaseolus vulgaris HOM05D005309 ORTHO05D006648 8.4e-63 244.6 266 53.0
Sp1g05320 Schrenkiella parvula HOM05D005309 ORTHO05D006648 8.4e-63 244.6 224 56.7
Medtr5g091110 Medicago truncatula HOM05D005309 ORTHO05D006648 1.1e-62 244.2 273 52.4
VMungo0647G1913 Vigna mungo HOM05D005309 ORTHO05D006648 1.4e-62 243.8 232 56.5
Ah.10g035950 Amaranthus hybridus HOM05D005309 ORTHO05D006648 1.9e-62 243.4 226 55.3
AT1G06560 Arabidopsis thaliana HOM05D005309 ORTHO05D006648 1.9e-62 243.4 224 55.8
A10p05200 Brassica napus HOM05D005309 ORTHO05D006648 2.4e-62 243.0 221 56.6
Carub.0001s0593 Capsella rubella HOM05D005309 ORTHO05D006648 3.2e-62 242.7 224 55.8
EL10Ac2g04244 Beta vulgaris HOM05D005309 ORTHO05D006648 4.2e-62 242.3 234 54.3
A08p35920 Brassica napus HOM05D005309 ORTHO05D006648 5.5e-62 241.9 221 56.6
BraA08t35499Z Brassica rapa HOM05D005309 ORTHO05D006648 5.5e-62 241.9 221 56.6
Lalb_Chr04g0248901 Lupinus albus HOM05D005309 ORTHO05D006648 5.5e-62 241.9 259 52.1
AL1G16590 Arabidopsis lyrata HOM05D005309 ORTHO05D006648 7.1e-62 241.5 224 56.2
LjContig00049g0017299 Lotus japonicus HOM05D005309 ORTHO05D006648 7.1e-62 241.5 266 49.2
Thhalv10007146m.g Eutrema salsugineum HOM05D005309 ORTHO05D006648 9.3e-62 241.1 221 56.6
Sc09g0008320 Simmondsia chinensis HOM05D005309 ORTHO05D006648 9.3e-62 241.1 226 57.5
Ca_06266_v3 Cicer arietinum L. HOM05D005309 ORTHO05D006648 1.6e-61 240.4 272 50.0
CARHR006170 Cardamine hirsuta HOM05D005309 ORTHO05D006648 2.1e-61 240.0 224 54.5
Psat2g017040 Pisum sativum HOM05D005309 ORTHO05D006648 2.1e-61 240.0 273 50.5
MD17G1135100 Malus domestica HOM05D005309 ORTHO05D006648 3.5e-61 239.2 253 52.2
Aa31LG1G7660 Aethionema arabicum HOM05D005309 ORTHO05D006648 4.6e-61 238.8 243 53.1
C05p04800 Brassica napus HOM05D005309 ORTHO05D006648 4.6e-61 238.8 221 55.7
BolC5t29253H Brassica oleracea HOM05D005309 ORTHO05D006648 4.6e-61 238.8 221 55.7
BcaB02g06781 Brassica carinata HOM05D005309 ORTHO05D006648 1.3e-60 237.3 224 54.9
BraA10t42787Z Brassica rapa HOM05D005309 ORTHO05D006648 1.3e-60 237.3 221 54.8
C08p02650 Brassica napus HOM05D005309 ORTHO05D006648 3.0e-60 236.1 220 57.3
BolC8t47061H Brassica oleracea HOM05D005309 ORTHO05D006648 3.0e-60 236.1 219 56.6
RcHm_v2.0_Chr2g0152091 Rosa chinensis HOM05D005309 ORTHO05D006648 5.1e-60 235.3 258 49.2
Zm00001eb170650 Zea mays HOM05D005309 ORTHO05D006648 1.9e-59 233.4 235 52.8
FAN14G4003 Fragaria x ananassa HOM05D005309 ORTHO05D006648 5.6e-59 231.9 257 49.4
FvH4_6g38630 Fragaria vesca HOM05D005309 ORTHO05D006648 7.4e-59 231.5 257 49.4
HPP92_023436 Vanilla planifolia HOM05D005309 ORTHO05D006648 9.6e-59 231.1 230 55.7
FAN02G0734 Fragaria x ananassa HOM05D005309 ORTHO05D006648 4.8e-58 228.8 256 48.4
FAN05G5670 Fragaria x ananassa HOM05D005309 ORTHO05D006648 8.1e-58 228.0 256 48.4
Lsat_1_v5_gn_4_26360 Lactuca sativa HOM05D005309 ORTHO05D006648 9.0e-57 224.6 226 52.2
Os08g0365900 Oryza sativa ssp. japonica HOM05D005309 ORTHO05D006648 1.2e-56 224.2 222 51.8
FAN09G0570 Fragaria x ananassa HOM05D005309 ORTHO05D006648 1.5e-56 223.8 251 48.6
SHI03273 Sapria himalayana HOM05D005309 ORTHO05D006648 3.4e-56 222.6 227 53.3
PSO339G1684 Papaver somniferum HOM05D005309 ORTHO05D006648 3.4e-48 196.1 197 56.3
MBI07_g26361_MAGBIO Magnolia biondii HOM05D005309 ORTHO05D006648 2.9e-47 193.0 181 56.9
COL.COLO4_08888 Corchorus olitorius HOM05D005309 ORTHO05D006648 1.4e-46 190.7 105 81.9
Pp3c12_23090 Physcomitrium patens HOM05D005309 ORTHO05D006648 6.5e-39 165.2 231 41.6
ATR0585G094 Amborella trichopoda HOM05D005309 ORTHO05D006648 6.3e-34 148.7 93 75.3
MD09G1148800 Malus domestica HOM05D005309 ORTHO05D006648 1.1e-33 147.9 94 75.5
Mapoly0025s0011 Marchantia polymorpha HOM05D005309 ORTHO05D006648 3.1e-33 146.4 259 37.5
Nitab4.5_0001552g0040 Nicotiana tabacum HOM05D005309 ORTHO05D006648 7.7e-32 141.7 203 45.3
SMO293G0021 Selaginella moellendorffii HOM05D005309 ORTHO05D006648 9.4e-30 134.8 219 37.0
Lsat_1_v5_gn_4_60740 Lactuca sativa HOM05D005309 ORTHO05D006648 1.4e-28 131.0 181 40.9
Lsat_1_v5_gn_4_120101 Lactuca sativa HOM05D005309 ORTHO05D006648 4.4e-27 125.9 98 61.2
CBR_g38934 Chara braunii HOM05D005309 ORTHO05D006648 8.8e-20 101.7 122 46.7
Cre13.g606200 Chlamydomonas reinhardtii HOM05D005309 ORTHO05D006648 8.8e-20 101.7 213 32.9
SMO111G0017 Selaginella moellendorffii HOM05D005309 ORTHO05D006648 2.0e-16 90.5 219 28.8
HanXRQChr09g0260261 Helianthus annuus HOM05D005309 ORTHO05D006648 1.3e-15 87.8 58 70.7
Nitab4.5_0001552g0030 Nicotiana tabacum HOM05D005309 ORTHO05D006648 1.5e-14 84.3 54 68.5
MBI07_g26360_MAGBIO Magnolia biondii HOM05D005309 ORTHO05D006648 3.4e-11 73.2 81 51.9
Cre11.g476450 Chlamydomonas reinhardtii HOM05D005309 ORTHO05D006648 1.7e-10 70.9 220 26.4
Duzib138G1377 Durio zibethinus HOM05D005309 ORTHO05D006648 1.4e-09 67.8 43 72.1
Lsat_1_v5_gn_3_94440 Lactuca sativa HOM05D005309 ORTHO05D006648 1.4e-09 67.8 119 33.6
Lsat_1_v5_gn_4_133180 Lactuca sativa HOM05D005309 ORTHO05D012139 1.4e-09 67.8 118 33.9
AagrBONN_evm.TU.Sc2ySwM_362.1083 Anthoceros agrestis HOM05D005309 ORTHO05D006648 2.4e-09 67.0 44 63.6
MBI07_g45791_MAGBIO Magnolia biondii HOM05D005309 ORTHO05D006648 7.0e-09 65.5 37 75.7
ATR0585G013 Amborella trichopoda HOM05D005309 ORTHO05D006648 2.9e-07 60.1 51 56.9


User provided reference genes

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