Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 6.3e-127 458.0 334 100.0
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 3.7e-111 405.6 321 93.8
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 6.0e-69 265.4 340 68.2
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 2.0e-56 223.8 335 57.6
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 2.7e-53 213.4 335 53.7
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 3.5e-53 213.0 337 59.1
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 6.6e-52 208.8 335 58.2
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.5e-51 207.6 337 54.6
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 5.6e-51 205.7 337 49.6
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 4.6e-45 186.0 326 47.9
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 3.4e-40 169.9 334 56.0
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 4.5e-40 169.5 321 57.0
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.4e-38 164.5 325 52.6
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 7.1e-38 162.2 243 53.5
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 2.1e-37 160.6 322 39.1
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.7e-37 160.2 325 52.0
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 3.5e-37 159.8 243 53.9
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 4.6e-37 159.5 334 51.5
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.0e-36 156.8 325 48.3
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 8.7e-36 155.2 298 57.4
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 9.6e-35 151.8 306 54.2
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 9.6e-35 151.8 327 52.6
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 9.6e-35 151.8 335 35.2
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.4e-33 147.1 325 46.5
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 7.6e-32 142.1 326 53.7
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.1e-30 138.3 371 41.8
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 3.2e-30 136.7 325 36.0
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 3.2e-30 136.7 340 50.6
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 4.2e-30 136.3 374 34.8
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 6.0e-29 132.5 300 49.7
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 2.3e-28 130.6 300 52.0
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 5.1e-28 129.4 335 45.4
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 1.1e-27 128.3 326 46.3
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 5.6e-27 125.9 342 35.7
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.7e-26 123.2 362 32.3
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.7e-26 123.2 362 32.3
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 4.8e-26 122.9 337 50.4
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 6.9e-25 119.0 306 35.0
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 2.0e-24 117.5 341 31.4
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 4.5e-24 116.3 309 47.6
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 2.2e-23 114.0 331 39.6
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 1.9e-22 110.9 334 43.1
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 1.5e-19 101.3 334 35.9
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 3.3e-19 100.1 296 48.3
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 1.6e-18 97.8 132 45.5
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 1.4e-17 94.7 342 40.4
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.4e-17 94.7 333 38.1
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 6.9e-17 92.4 314 37.9
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.5e-16 91.3 314 36.3
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 2.6e-16 90.5 369 29.3
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 4.5e-16 89.7 319 43.3
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 5.9e-16 89.4 268 29.5
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 5.9e-16 89.4 329 35.3
Sabra02G0048700 Salix brachista HOM05D006785 ORTHO05D006259 1.7e-15 87.8 327 49.2
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 5.0e-15 86.3 239 41.4
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.9e-14 84.3 343 39.1
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 1.9e-14 84.3 236 31.8
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 4.2e-14 83.2 340 35.3
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 9.3e-14 82.0 135 42.2
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 9.3e-14 82.0 335 38.8
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.6e-13 81.3 338 30.2
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.7e-13 80.5 258 35.7
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 3.6e-13 80.1 227 31.7
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 6.1e-13 79.3 234 30.8
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 6.1e-13 79.3 300 42.3
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 7.9e-13 79.0 236 43.6
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.0e-12 78.6 143 39.9
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 1.0e-12 78.6 135 41.5
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 1.8e-12 77.8 266 31.6
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 2.3e-12 77.4 136 61.0
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 3.9e-12 76.6 326 31.3
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.1e-11 75.1 145 40.0
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 1.5e-11 74.7 234 29.9
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.9e-11 74.3 313 38.3
Duzib147G0591 Durio zibethinus HOM05D006785 ORTHO05D006259 2.5e-11 73.9 334 44.6
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 1.6e-10 71.2 239 44.8
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 8.2e-10 68.9 160 45.6
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.8e-09 67.8 136 36.0
Ca_25754_v3 Cicer arietinum L. HOM05D021759 ORTHO05D020454 3.1e-09 67.0 145 33.1
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.1e-09 67.0 105 39.0
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.1e-09 67.0 105 39.0
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 4.1e-09 66.6 105 39.0
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 9.1e-09 65.5 325 32.9
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.2e-08 65.1 132 43.9
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.0e-08 64.3 98 40.8
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.4e-08 63.5 224 30.8
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 4.5e-08 63.2 355 24.5
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 4.5e-08 63.2 268 36.9
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.3e-07 61.6 211 32.2
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 1.3e-07 61.6 321 27.1
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.3e-07 61.6 342 25.1
Duzib187G1417 Durio zibethinus HOM05D006785 ORTHO05D006259 1.7e-07 61.2 329 47.4
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 2.9e-07 60.5 185 44.3
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 2.9e-07 60.5 237 38.0
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 5.0e-07 59.7 137 36.5
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 6.5e-07 59.3 137 36.5
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 1.1e-06 58.5 134 32.8
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 1.4e-06 58.2 132 32.6
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 1.9e-06 57.8 285 34.0
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 2.5e-06 57.4 335 33.1
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 3.2e-06 57.0 322 25.2
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 7.2e-06 55.8 39 71.8
BcaC08g44946 Brassica carinata HOM05D006785 ORTHO05D023842 9.4e-06 55.5 153 47.1


User provided reference genes

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