Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 1.7e-138 496.9 471 100.0
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 5.3e-55 219.5 532 67.1
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 3.4e-17 94.0 221 40.3
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.1e-15 89.0 189 39.7
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 2.4e-15 87.8 184 44.6
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.1e-15 87.0 195 42.6
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 8.5e-13 79.3 182 38.5
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 1.1e-12 79.0 187 39.6
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.9e-12 78.2 475 37.5
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 4.2e-12 77.0 461 50.5
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 7.2e-12 76.3 463 49.2
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 2.1e-11 74.7 184 37.0
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 4.7e-11 73.6 192 37.5
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 4.7e-11 73.6 185 36.8
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 1.0e-10 72.4 187 35.8
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 1.0e-10 72.4 184 38.0
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 2.3e-10 71.2 185 35.1
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 6.8e-10 69.7 184 35.9
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 6.8e-10 69.7 184 34.8
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 6.8e-10 69.7 184 35.9
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 1.2e-09 68.9 184 40.2
Ciclev10014817m.g Citrus clementina HOM05D008991 ORTHO05D010442 1.2e-09 68.9 209 40.7
TWI59G0499 Tripterygium wilfordii HOM05D012920 ORTHO05D012188 1.2e-09 68.9 166 39.2
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 4.4e-09 67.0 184 33.7
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 4.4e-09 67.0 184 33.7
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 5.7e-09 66.6 185 34.6
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 1.7e-08 65.1 212 32.1
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 3.7e-08 63.9 184 32.6
ClCG02G017970 Citrullus lanatus HOM05D024384 ORTHO05D010442 3.7e-08 63.9 227 39.2
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 4.9e-08 63.5 187 37.4
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 6.3e-08 63.2 235 34.5
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 8.3e-08 62.8 184 35.9
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 1.1e-07 62.4 245 32.2
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 1.4e-07 62.0 184 35.3
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 1.4e-07 62.0 182 33.0
COL.COLO4_36295 Corchorus olitorius HOM05D020995 ORTHO05D010442 4.1e-07 60.5 207 32.4
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 7.0e-07 59.7 181 33.1
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 1.2e-06 58.9 183 32.8
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 1.2e-06 58.9 183 35.5
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 1.2e-06 58.9 187 33.7
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 2.7e-06 57.8 486 37.4
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 2.7e-06 57.8 218 33.0
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 3.5e-06 57.4 230 31.3
Cfa019824 Carpinus fangiana HOM05D050872 ORTHO05D010442 5.9e-06 56.6 121 76.0
Atru.chr6.2817 Acer truncatum HOM05D015016 ORTHO05D016410 7.7e-06 56.2 64 57.8


User provided reference genes

Program Settings