Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12872 Corylus avellana HOM05D000727 ORTHO05D000541 1.5e-69 266.2 139 100.0
Cfa014412 Carpinus fangiana HOM05D000727 ORTHO05D000541 6.8e-27 124.4 68 95.6
CiPaw.03G160400 Carya illinoinensis HOM05D000727 ORTHO05D000541 2.5e-21 105.9 68 85.3
Manes.12G074900 Manihot esculenta HOM05D000727 ORTHO05D000541 3.0e-14 82.4 72 65.3
Sed0014654 Sechium edule HOM05D000727 ORTHO05D000541 1.5e-13 80.1 68 60.3
Atru.chr6.3176 Acer truncatum HOM05D000727 ORTHO05D000541 5.6e-13 78.2 72 59.7
CANSAT64G2837 Cannabis sativa HOM05D000727 ORTHO05D000541 5.6e-13 78.2 68 63.2
Sc05g0007720 Simmondsia chinensis HOM05D000727 ORTHO05D000541 5.6e-13 78.2 68 63.2
TAR626G1207 Trochodendron aralioides HOM05D001731 ORTHO05D004784 7.3e-13 77.8 70 62.9
MELO3C019265.2 Cucumis melo HOM05D000727 ORTHO05D000541 3.1e-11 72.4 68 58.8
CsaV3_2G034980 Cucumis sativus L. HOM05D000727 ORTHO05D000541 9.0e-11 70.9 68 55.9
Nn1g07114 Nelumbo nucifera HOM05D000727 ORTHO05D000541 9.0e-11 70.9 72 56.9
PGR042G2804 Punica granatum HOM05D000727 ORTHO05D000541 5.8e-10 68.2 68 55.9
CSS0015298 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 7.6e-10 67.8 71 56.3
Nitab4.5_0002137g0060 Nicotiana tabacum HOM05D000727 ORTHO05D000541 7.6e-10 67.8 68 57.4
Oeu041927.1 Olea europaea HOM05D000727 ORTHO05D000541 9.9e-10 67.4 69 58.0
Sc25g0001400 Simmondsia chinensis HOM05D000727 ORTHO05D000541 1.1e-08 63.9 44 68.2
RcHm_v2.0_Chr2g0100971 Rosa chinensis HOM05D000727 ORTHO05D000541 4.2e-08 62.0 72 52.8
Lalb_Chr23g0265701 Lupinus albus HOM05D000727 ORTHO05D000541 7.1e-08 61.2 57 57.9
Prupe.1G350700 Prunus persica HOM05D000727 ORTHO05D000541 7.1e-08 61.2 60 56.7
HPP92_008380 Vanilla planifolia HOM05D000727 ORTHO05D000541 1.2e-07 60.5 71 49.3
CSS0049308 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 2.7e-07 59.3 45 68.9
PSO206G0034 Papaver somniferum HOM05D000727 ORTHO05D000541 3.5e-07 58.9 42 69.0
PSO339G3557 Papaver somniferum HOM05D000727 ORTHO05D000541 3.5e-07 58.9 42 69.0
ClCG01G007990 Citrullus lanatus HOM05D000727 ORTHO05D000541 4.6e-07 58.5 61 55.7
ClCG02G008680 Citrullus lanatus HOM05D000727 ORTHO05D000541 4.6e-07 58.5 51 56.9
CsaV3_5G021890 Cucumis sativus L. HOM05D000727 ORTHO05D000541 4.6e-07 58.5 61 57.4
Duzib132G0609 Durio zibethinus HOM05D000727 ORTHO05D000541 4.6e-07 58.5 58 55.2
FvH4_4g37280 Fragaria vesca HOM05D000727 ORTHO05D000541 4.6e-07 58.5 67 49.3
RcHm_v2.0_Chr4g0447101 Rosa chinensis HOM05D000727 ORTHO05D000541 4.6e-07 58.5 58 55.2
TAR622G0466 Trochodendron aralioides HOM05D000727 ORTHO05D000541 4.6e-07 58.5 57 54.4
HPP92_015835 Vanilla planifolia HOM05D000727 ORTHO05D000541 4.6e-07 58.5 69 50.7
CSS0022723 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 6.0e-07 58.2 45 66.7
Lsat_1_v5_gn_0_33141 Lactuca sativa HOM05D000727 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_2_111060 Lactuca sativa HOM05D003193 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_2_37700 Lactuca sativa HOM05D000727 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_3_130281 Lactuca sativa HOM05D001939 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_4_135300 Lactuca sativa HOM05D000727 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_4_98601 Lactuca sativa HOM05D000144 ORTHO05D023591 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_5_158740 Lactuca sativa HOM05D000727 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_8_26980 Lactuca sativa HOM05D000727 ORTHO05D000541 6.0e-07 58.2 50 64.0
Lsat_1_v5_gn_9_46521 Lactuca sativa HOM05D000727 ORTHO05D000541 6.0e-07 58.2 50 64.0
QL01p000468 Quercus lobata HOM05D000727 ORTHO05D000541 6.0e-07 58.2 45 64.4
QL01p000554 Quercus lobata HOM05D000727 ORTHO05D000541 6.0e-07 58.2 45 64.4
ECA233G0507 Erigeron canadensis HOM05D000727 ORTHO05D000541 7.9e-07 57.8 69 47.8
Lalb_Chr08g0246481 Lupinus albus HOM05D000727 ORTHO05D000541 7.9e-07 57.8 57 54.4
Sabra07G0000800 Salix brachista HOM05D000727 ORTHO05D000541 7.9e-07 57.8 60 58.3
SalBow5G5592 Salvia bowleyana HOM05D000727 ORTHO05D000541 7.9e-07 57.8 58 53.4
arahy.Tifrunner.gnm1.ann1.BLWT23 Arachis hypogaea HOM05D000727 ORTHO05D000541 1.0e-06 57.4 32 78.1
COL.COLO4_33133 Corchorus olitorius HOM05D000727 ORTHO05D000541 1.0e-06 57.4 44 59.1
Migut.E00666 Erythranthe guttata HOM05D000727 ORTHO05D000541 1.0e-06 57.4 62 56.5
Lj2P499T18 Lonicera japonica HOM05D000727 ORTHO05D000541 1.0e-06 57.4 68 48.5
MD13G1001900 Malus domestica HOM05D000727 ORTHO05D000541 1.0e-06 57.4 45 62.2
PGR044G1367 Punica granatum HOM05D000727 ORTHO05D000541 1.0e-06 57.4 64 51.6
Aa31sc318G40 Aethionema arabicum HOM05D000727 ORTHO05D000541 1.3e-06 57.0 56 55.4
Lsat_1_v5_gn_9_45381 Lactuca sativa HOM05D000727 ORTHO05D000541 1.3e-06 57.0 55 54.5
Lalb_Chr02g0144141 Lupinus albus HOM05D000727 ORTHO05D000541 1.3e-06 57.0 42 59.5
QL03p043172 Quercus lobata HOM05D000727 ORTHO05D000541 1.3e-06 57.0 57 52.6
QL07p005881 Quercus lobata HOM05D000727 ORTHO05D000541 1.3e-06 57.0 57 52.6
MELO3C027239.2 Cucumis melo HOM05D000727 ORTHO05D000541 1.7e-06 56.6 31 80.6
Duzib248G1122 Durio zibethinus HOM05D000727 ORTHO05D000541 1.7e-06 56.6 65 53.8
HanXRQChr13g0417961 Helianthus annuus HOM05D000727 ORTHO05D000541 1.7e-06 56.6 37 64.9
Nitab4.5_0005297g0030 Nicotiana tabacum HOM05D000727 ORTHO05D000541 1.7e-06 56.6 46 60.9
Oeu036108.1 Olea europaea HOM05D000727 ORTHO05D000541 1.7e-06 56.6 57 56.1
Oeu063406.1 Olea europaea HOM05D000727 ORTHO05D000541 1.7e-06 56.6 64 53.1
Potri.007G000900 Populus trichocarpa HOM05D000727 ORTHO05D000541 1.7e-06 56.6 60 56.7
QL02p065573 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL03p064964 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL04p066059 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL04p089257 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL05p042510 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL08p027154 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL10p054392 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL12p031840 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL93p0200_0002 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
QL93p0249_0027 Quercus lobata HOM05D000727 ORTHO05D000541 1.7e-06 56.6 43 65.1
CAN.G354.15 Capsicum annuum HOM05D000727 ORTHO05D000541 2.3e-06 56.2 57 54.4
Gohir.A12G133000 Gossypium hirsutum HOM05D000727 ORTHO05D000541 2.3e-06 56.2 45 64.4
Gohir.D12G136500 Gossypium hirsutum HOM05D000727 ORTHO05D000541 2.3e-06 56.2 45 64.4
Gorai.008G147700 Gossypium raimondii HOM05D000727 ORTHO05D000541 2.3e-06 56.2 45 64.4
Oeu033594.1 Olea europaea HOM05D000727 ORTHO05D000541 2.3e-06 56.2 64 53.1
Peaxi162Scf00122g02315 Petunia axillaris HOM05D000727 ORTHO05D000541 2.3e-06 56.2 68 48.5
Lalb_Chr01g0008321 Lupinus albus HOM05D000727 ORTHO05D000541 3.0e-06 55.8 57 50.9
Oeu042480.1 Olea europaea HOM05D000727 ORTHO05D000541 3.0e-06 55.8 68 44.1
PSO339G3526 Papaver somniferum HOM05D000727 ORTHO05D000541 3.0e-06 55.8 45 60.0
Psat6g235800 Pisum sativum HOM05D000727 ORTHO05D000541 3.0e-06 55.8 43 65.1
SEGI_21208 Sequoiadendron giganteum HOM05D000727 ORTHO05D000541 3.0e-06 55.8 61 52.5
Thecc.02G153200 Theobroma cacao HOM05D000727 ORTHO05D000541 3.0e-06 55.8 50 60.0
GSVIVG01013385001 Vitis vinifera HOM05D000727 ORTHO05D000541 3.0e-06 55.8 60 53.3
ECA246G5085 Erigeron canadensis HOM05D000727 ORTHO05D000541 3.9e-06 55.5 64 46.9
Eucgr.A00506 Eucalyptus grandis HOM05D000727 ORTHO05D000541 3.9e-06 55.5 46 58.7
HanXRQChr16g0531871 Helianthus annuus HOM05D000727 ORTHO05D000541 3.9e-06 55.5 60 50.0
Rhsim10G0196000 Rhododendron simsii HOM05D000727 ORTHO05D000541 3.9e-06 55.5 56 53.6
Sopen03g005980 Solanum pennellii HOM05D000727 ORTHO05D000541 3.9e-06 55.5 57 54.4
PGSC0003DMG400018685 Solanum tuberosum HOM05D000727 ORTHO05D000541 3.9e-06 55.5 57 54.4
TWI53G1408 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 3.9e-06 55.5 70 47.1
Aqoxy3G04324 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 5.1e-06 55.1 61 52.5
Ca_24979_v3 Cicer arietinum L. HOM05D000727 ORTHO05D000541 5.1e-06 55.1 65 49.2
HanXRQChr12g0366531 Helianthus annuus HOM05D000727 ORTHO05D000541 5.1e-06 55.1 58 51.7
MBI05_g09436_MAGBIO Magnolia biondii HOM05D000727 ORTHO05D000541 5.1e-06 55.1 32 75.0
Oeu039714.1 Olea europaea HOM05D000727 ORTHO05D000541 5.1e-06 55.1 68 42.6
Psat2g148160 Pisum sativum HOM05D000727 ORTHO05D000541 5.1e-06 55.1 61 49.2
Rhsim05G0214100 Rhododendron simsii HOM05D000727 ORTHO05D000541 5.1e-06 55.1 49 55.1
Hund09512 Selenicereus undatus HOM05D000727 ORTHO05D000541 5.1e-06 55.1 59 49.2
Solyc09g014620.3 Solanum lycopersicum HOM05D000727 ORTHO05D000541 5.1e-06 55.1 45 60.0
Sopen09g007460 Solanum pennellii HOM05D000727 ORTHO05D000541 5.1e-06 55.1 45 60.0
MSTRG.24502 Avicennia marina HOM05D000727 ORTHO05D000541 6.6e-06 54.7 68 48.5
CSS0047746 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 6.6e-06 54.7 62 45.2
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 6.6e-06 54.7 60 50.0
Cc07_g11830 Coffea canephora HOM05D000727 ORTHO05D000541 6.6e-06 54.7 68 47.1
CsaV3_4G037350 Cucumis sativus L. HOM05D000727 ORTHO05D000541 6.6e-06 54.7 68 45.6
Dinv23097 Davidia involucrata HOM05D000727 ORTHO05D000541 6.6e-06 54.7 50 52.0
Oeu012544.1 Olea europaea HOM05D000727 ORTHO05D000541 6.6e-06 54.7 68 42.6
Peaxi162Scf00580g00028 Petunia axillaris HOM05D000727 ORTHO05D000541 6.6e-06 54.7 50 60.0
vmacro23501 Vaccinium macrocarpon HOM05D000727 ORTHO05D000541 6.6e-06 54.7 58 51.7
Actinidia17056 Actinidia chinensis HOM05D000727 ORTHO05D000541 8.7e-06 54.3 50 50.0
CiPaw.10G156100 Carya illinoinensis HOM05D000727 ORTHO05D000541 8.7e-06 54.3 56 53.6
Ca_11274_v3 Cicer arietinum L. HOM05D000727 ORTHO05D000541 8.7e-06 54.3 42 59.5
Ca_24980_v3 Cicer arietinum L. HOM05D000727 ORTHO05D000541 8.7e-06 54.3 61 47.5
Migut.O00319 Erythranthe guttata HOM05D000727 ORTHO05D000541 8.7e-06 54.3 45 62.2
FAN17G1781 Fragaria x ananassa HOM05D000727 ORTHO05D000541 8.7e-06 54.3 64 46.9
Hma1.2p1_0300F.1_g118000 Hydrangea macrophylla HOM05D000727 ORTHO05D000541 8.7e-06 54.3 47 55.3
Lalb_Chr05g0214791 Lupinus albus HOM05D000727 ORTHO05D000541 8.7e-06 54.3 61 47.5
Lalb_Chr11g0061531 Lupinus albus HOM05D000727 ORTHO05D000541 8.7e-06 54.3 57 50.9
MD00G1127400 Malus domestica HOM05D000727 ORTHO05D000541 8.7e-06 54.3 93 38.7
Sed0006666 Sechium edule HOM05D000727 ORTHO05D000541 8.7e-06 54.3 58 51.7
Sc22g0002460 Simmondsia chinensis HOM05D000727 ORTHO05D000541 8.7e-06 54.3 46 54.3
TWI09G0481 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 8.7e-06 54.3 58 48.3
GSVIVG01034361001 Vitis vinifera HOM05D000727 ORTHO05D000541 8.7e-06 54.3 58 53.4


User provided reference genes

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