Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 4.8e-108 394.4 190 100.0
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.0e-98 362.5 188 94.1
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.2e-66 256.9 185 70.8
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 9.6e-56 220.7 192 62.0
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 6.9e-54 214.5 143 74.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 6.9e-54 214.5 143 74.8
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 1.5e-53 213.4 133 76.7
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 4.4e-53 211.8 178 62.4
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 5.8e-53 211.5 199 62.3
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 2.9e-52 209.1 169 64.5
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.8e-52 208.8 168 67.3
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 6.4e-52 208.0 171 67.8
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.1e-51 207.2 180 61.7
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.1e-51 207.2 171 67.8
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 4.2e-51 205.3 195 61.0
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 1.2e-50 203.8 179 64.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.2e-50 203.8 189 59.8
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.6e-50 203.4 172 63.4
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 6.0e-50 201.4 119 76.5
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 7.9e-50 201.1 180 60.6
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.7e-49 199.9 151 65.6
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 3.0e-49 199.1 173 62.4
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.0e-49 199.1 205 55.1
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 3.9e-49 198.7 164 64.0
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 5.1e-49 198.4 191 59.7
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 5.1e-49 198.4 181 61.9
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 6.6e-49 198.0 178 59.0
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 6.6e-49 198.0 176 56.8
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 8.7e-49 197.6 173 63.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.9e-48 196.4 182 58.8
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 2.5e-48 196.1 174 62.1
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.5e-48 196.1 182 58.8
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 4.3e-48 195.3 114 75.4
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 5.6e-48 194.9 140 67.1
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 5.6e-48 194.9 169 59.8
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 7.3e-48 194.5 119 78.2
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 7.3e-48 194.5 179 59.8
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 1.3e-47 193.7 171 59.6
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.3e-47 193.7 196 58.2
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.6e-47 193.4 182 58.2
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 2.8e-47 192.6 182 61.0
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 3.6e-47 192.2 171 59.1
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 3.6e-47 192.2 186 59.1
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.2e-47 191.4 170 59.4
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 8.1e-47 191.0 182 59.3
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 8.1e-47 191.0 133 69.9
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.4e-46 190.3 190 56.8
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.4e-46 190.3 128 69.5
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 1.4e-46 190.3 128 69.5
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 1.4e-46 190.3 128 69.5
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.8e-46 189.9 171 60.8
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 1.8e-46 189.9 155 63.9
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 2.4e-46 189.5 174 58.0
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 2.4e-46 189.5 165 58.8
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 2.4e-46 189.5 174 56.9
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.4e-46 189.5 168 60.7
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 2.4e-46 189.5 130 70.0
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.1e-46 189.1 155 62.6
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 3.1e-46 189.1 180 59.4
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 3.1e-46 189.1 172 59.3
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 4.0e-46 188.7 167 59.3
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.0e-46 188.7 130 72.3
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.2e-45 187.2 169 59.2
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.2e-45 187.2 162 59.9
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.5e-45 186.8 174 59.8
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 2.6e-45 186.0 168 58.3
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 2.6e-45 186.0 168 58.3
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.6e-45 186.0 172 58.1
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 3.4e-45 185.7 169 59.2
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 3.4e-45 185.7 121 71.1
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 4.5e-45 185.3 168 57.7
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 4.5e-45 185.3 171 61.4
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 4.5e-45 185.3 110 78.2
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 5.8e-45 184.9 185 56.2
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.8e-45 184.9 170 60.6
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 7.6e-45 184.5 174 59.8
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.3e-44 183.7 111 78.4
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 2.2e-44 183.0 168 61.9
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.8e-44 182.2 179 58.1
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 4.9e-44 181.8 118 72.0
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 8.4e-44 181.0 117 72.6
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 8.4e-44 181.0 180 53.3
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.1e-43 180.6 176 56.8
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.4e-43 180.3 194 56.2
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.4e-43 180.3 182 55.5
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.9e-43 179.9 185 54.6
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 4.2e-43 178.7 157 58.0
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 5.5e-43 178.3 169 58.6
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 2.7e-42 176.0 175 56.6
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.3e-41 173.7 151 60.9
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.8e-41 173.3 185 53.0
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 3.9e-41 172.2 123 69.1
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 3.9e-41 172.2 112 73.2
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.5e-40 169.5 147 59.9
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 3.3e-40 169.1 164 56.7
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.4e-37 159.1 112 67.0
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.9e-36 156.0 101 70.3
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.5e-34 149.1 91 72.5
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 6.7e-33 144.8 143 51.7
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.3e-32 142.5 143 48.3
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 2.1e-31 139.8 163 47.9
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.7e-31 139.0 189 43.9
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 4.8e-31 138.7 168 48.2
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 4.8e-31 138.7 134 55.2
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 8.2e-31 137.9 108 57.4
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.4e-30 137.1 125 54.4
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.1e-30 136.0 178 46.1
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 9.0e-30 134.4 127 52.0
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.4e-29 132.5 149 47.0
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.4e-29 132.5 106 56.6
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 4.5e-29 132.1 133 53.4
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 4.5e-29 132.1 138 50.0
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 5.9e-29 131.7 145 46.9
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 5.9e-29 131.7 136 47.8
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 7.6e-29 131.3 138 50.7
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 7.6e-29 131.3 177 45.2
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.3e-28 130.6 130 46.9
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.3e-28 130.6 103 60.2
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.3e-28 130.6 109 56.0
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.7e-28 130.2 136 49.3
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 2.2e-28 129.8 147 46.3
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 2.2e-28 129.8 133 51.1
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.9e-28 129.4 152 43.4
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 3.8e-28 129.0 109 55.0
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.8e-28 129.0 109 55.0
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.5e-28 128.3 109 55.0
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.1e-27 127.5 174 40.8
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 1.1e-27 127.5 122 50.0
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.4e-27 127.1 121 49.6
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.9e-27 126.7 109 52.3
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.5e-27 126.3 130 48.5
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 3.2e-27 125.9 145 46.2
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 4.2e-27 125.6 121 49.6
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 4.2e-27 125.6 155 42.6
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.5e-27 125.2 152 42.8
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 5.5e-27 125.2 105 56.2
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 9.3e-27 124.4 133 44.4
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 9.3e-27 124.4 125 50.4
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 1.2e-26 124.0 137 46.0
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-26 123.6 179 41.3
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.5e-26 122.5 124 50.8
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 3.5e-26 122.5 60 88.3
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.1e-26 121.7 109 49.5
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.0e-25 120.9 62 85.5
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 3.0e-25 119.4 103 53.4
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 5.1e-25 118.6 105 48.6
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 8.7e-25 117.9 139 44.6
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.9e-24 116.7 148 40.5
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.6e-23 113.6 106 50.0
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 2.2e-23 113.2 163 38.7
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 3.7e-23 112.5 130 46.9
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 4.8e-23 112.1 158 41.1
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 8.2e-23 111.3 179 38.5
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.1e-22 110.9 93 57.0
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 6.9e-22 108.2 114 52.6
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.4e-21 105.9 135 40.7
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.2e-20 103.2 101 52.5
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.1e-19 100.9 54 79.6
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.9e-19 100.1 141 41.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 2.5e-19 99.8 141 41.8
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.2e-19 99.4 98 53.1
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 4.2e-19 99.0 58 74.1
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 7.2e-19 98.2 206 31.6
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 2.7e-18 96.3 96 46.9
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 5.1e-17 92.0 132 38.6
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.3e-16 89.4 178 37.6
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.3e-16 89.4 229 28.4
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 2.8e-15 86.3 58 63.8
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 3.4e-13 79.3 121 43.8
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.4e-11 73.9 78 46.2
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 3.6e-10 69.3 95 35.8
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 4.8e-07 58.9 54 57.4
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 8.2e-07 58.2 72 44.4


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