Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 8.1e-193 677.2 410 100.0
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 1.4e-152 543.5 410 86.3
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 4.6e-140 501.9 408 80.1
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.9e-126 456.1 357 79.0
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.7e-121 439.1 358 77.7
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 4.1e-120 435.6 358 76.8
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 7.7e-119 431.4 376 71.3
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.9e-118 429.5 407 72.2
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 5.0e-118 428.7 367 74.9
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.2e-117 425.6 307 73.3
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 4.2e-117 425.6 364 75.0
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 9.4e-117 424.5 299 77.3
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 3.6e-116 422.5 306 73.2
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.0e-115 419.1 306 72.5
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.6e-114 416.4 345 72.2
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 9.8e-114 414.5 366 75.1
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 4.8e-113 412.1 303 73.9
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 6.3e-113 411.8 306 73.9
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 4.1e-112 409.1 363 71.3
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 5.4e-112 408.7 303 73.3
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.6e-111 407.1 314 72.3
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.6e-111 407.1 365 73.7
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 1.6e-111 407.1 306 71.2
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 2.1e-108 396.7 366 71.9
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.4e-107 394.0 339 64.3
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 5.2e-107 392.1 396 67.4
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.8e-107 391.7 307 70.7
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 2.0e-106 390.2 320 67.8
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 4.4e-106 389.0 303 71.3
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 7.5e-106 388.3 401 69.8
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.2e-105 386.7 301 70.8
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 7.0e-104 381.7 307 78.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.7e-103 379.8 366 67.2
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.7e-102 377.1 291 71.8
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 2.9e-102 376.3 338 66.0
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 3.8e-102 375.9 365 69.6
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 8.6e-102 374.8 302 68.5
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.1e-101 374.4 300 66.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 1.5e-101 374.0 307 69.4
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 2.5e-101 373.2 302 66.6
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 3.3e-101 372.9 336 62.2
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 4.2e-101 372.5 293 70.6
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 4.2e-101 372.5 293 70.6
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 4.7e-100 369.0 303 67.7
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.0e-99 367.9 329 67.2
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.4e-99 367.5 330 67.0
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.8e-99 367.1 299 67.2
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 4.0e-99 365.9 311 65.6
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 5.2e-99 365.5 299 68.9
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 5.2e-99 365.5 299 65.9
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 8.9e-99 364.8 295 67.1
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.2e-98 364.4 270 69.3
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.2e-98 364.4 302 67.2
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 5.7e-98 362.1 327 67.0
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 5.7e-98 362.1 327 67.0
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 7.5e-98 361.7 268 74.6
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 7.5e-98 361.7 300 64.0
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 7.5e-98 361.7 285 82.1
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 2.2e-97 360.1 304 66.8
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 6.3e-97 358.6 287 67.9
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 8.3e-97 358.2 310 65.2
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.2e-96 356.3 296 68.2
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 3.5e-95 352.8 265 79.2
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.0e-94 351.3 296 67.2
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 5.0e-94 349.0 248 77.8
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.9e-93 347.1 279 70.6
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.9e-93 347.1 305 74.8
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 4.3e-93 345.9 290 66.6
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.2e-89 333.6 266 86.8
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 4.9e-89 332.4 223 78.0
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.6e-87 327.4 259 75.3
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 4.6e-87 325.9 287 65.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 5.0e-86 322.4 321 57.0
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 1.8e-83 313.9 329 61.1
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.0e-82 310.5 243 72.0
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 9.2e-80 301.6 239 70.7
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 2.5e-77 293.5 211 77.3
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 3.3e-77 293.1 250 62.4
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 5.2e-75 285.8 208 74.0
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.4e-72 277.7 237 65.0
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 1.2e-63 248.1 333 49.5
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 9.0e-59 231.9 161 75.2
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.3e-57 228.0 203 67.5
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 2.9e-57 226.9 207 66.2
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 8.4e-57 225.3 251 55.4
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.9e-56 224.2 246 56.1
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 3.9e-54 216.5 174 72.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.2e-49 200.7 135 75.6
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 2.8e-44 183.7 242 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 3.5e-39 166.8 194 51.5
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 3.3e-37 160.2 254 37.0
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.9e-33 147.1 115 77.4
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 1.8e-27 127.9 152 45.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.0e-25 119.8 73 90.4
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 1.3e-20 105.1 80 68.8


User provided reference genes

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