Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.1e-121 439.1 234 100.0
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 2.3e-120 435.6 234 98.7
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 3.9e-107 391.7 240 87.9
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.3e-73 280.4 242 65.7
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 3.1e-72 275.8 244 63.1
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 5.8e-71 271.6 243 63.0
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 1.8e-59 233.4 220 59.5
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 4.1e-56 222.2 242 52.9
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 6.5e-54 214.9 232 52.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 9.3e-53 211.1 234 51.3
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 4.6e-52 208.8 234 50.9
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 7.9e-52 208.0 229 52.4
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 6.7e-51 204.9 238 50.8
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.6e-49 200.3 231 51.1
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 3.7e-49 199.1 237 48.9
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.2e-47 194.1 228 48.2
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 2.0e-47 193.4 252 44.8
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 4.5e-47 192.2 213 51.2
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 5.9e-47 191.8 230 50.4
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 1.0e-46 191.0 243 46.9
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 2.2e-46 189.9 237 49.4
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 3.8e-46 189.1 240 49.6
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 5.0e-46 188.7 182 58.2
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 5.0e-46 188.7 227 47.6
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 9.4e-45 184.5 237 47.7
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.7e-44 183.0 220 47.3
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 6.1e-44 181.8 185 51.4
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 6.1e-44 181.8 225 47.6
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 7.9e-44 181.4 198 53.0
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.8e-43 180.3 224 47.3
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.0e-43 179.5 216 48.1
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 5.1e-43 178.7 243 46.1
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 2.0e-42 176.8 230 46.1
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 4.4e-42 175.6 225 45.8
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 9.7e-42 174.5 226 45.6
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 2.2e-41 173.3 242 45.9
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 1.8e-40 170.2 202 48.0
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 2.4e-40 169.9 212 44.3
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 5.3e-40 168.7 212 44.3
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 2.0e-39 166.8 245 48.2
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.4e-39 166.0 173 53.2
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 4.5e-39 165.6 213 46.5
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.0e-38 164.5 237 44.3
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 1.7e-38 163.7 236 44.5
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 2.9e-38 162.9 240 42.9
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.1e-37 161.0 152 59.9
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 1.4e-37 160.6 212 46.7
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 1.9e-37 160.2 200 46.5
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 3.2e-37 159.5 244 41.8
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 3.2e-37 159.5 272 40.1
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 4.2e-37 159.1 245 43.3
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 4.2e-37 159.1 265 41.1
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 5.5e-37 158.7 245 41.2
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 7.2e-37 158.3 221 43.4
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 9.4e-37 157.9 210 46.2
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 1.2e-36 157.5 203 42.4
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.2e-36 157.5 234 43.6
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 1.6e-36 157.1 187 48.7
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.6e-36 157.1 220 45.5
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 2.1e-36 156.8 221 45.2
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 2.7e-36 156.4 236 40.7
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 3.6e-36 156.0 218 45.9
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 3.6e-36 156.0 218 45.9
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 3.6e-36 156.0 218 45.9
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 3.6e-36 156.0 255 40.4
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 6.1e-36 155.2 225 41.3
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.0e-35 154.5 220 45.0
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.0e-35 154.5 239 43.5
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 1.8e-35 153.7 238 42.9
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.8e-35 153.7 221 41.6
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.9e-35 152.5 232 42.7
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 5.2e-35 152.1 212 47.2
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 8.8e-35 151.4 218 44.0
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 8.8e-35 151.4 190 44.7
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 8.8e-35 151.4 245 40.0
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 1.1e-34 151.0 206 46.6
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 1.5e-34 150.6 263 38.8
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 2.0e-34 150.2 241 41.1
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 2.6e-34 149.8 252 38.1
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.3e-34 149.4 223 43.9
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.4e-34 149.1 220 43.6
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.7e-33 147.1 237 41.8
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 2.2e-33 146.7 201 44.3
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 3.7e-33 146.0 176 48.3
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 8.2e-33 144.8 193 44.6
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 8.2e-33 144.8 222 40.5
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 5.3e-32 142.1 199 44.7
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 7.0e-32 141.7 228 40.4
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 4.5e-31 139.0 200 43.5
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 5.2e-27 125.6 187 40.6
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 8.8e-27 124.8 224 37.9
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.6e-26 123.2 216 38.4
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 3.3e-26 122.9 237 34.6
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.4e-24 117.5 156 46.8
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 7.0e-24 115.2 210 37.1
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 1.7e-22 110.5 103 57.3
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 3.2e-21 106.3 113 55.8
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 8.0e-20 101.7 234 34.2
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 5.2e-19 99.0 214 35.0
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 2.6e-18 96.7 258 31.4
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 2.2e-17 93.6 131 42.7
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 8.3e-17 91.7 227 33.5
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 3.8e-14 82.8 121 43.0
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 5.0e-14 82.4 197 34.5
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 7.2e-13 78.6 217 31.8
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 7.2e-13 78.6 227 31.7
Zm00001eb370010 Zea mays HOM05D007216 ORTHO05D049898 1.2e-10 71.2 213 29.6
Os01g0773800 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D049898 3.1e-08 63.2 195 30.8


User provided reference genes

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