Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.2e-143 513.1 250 100.0
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 3.9e-113 411.8 335 67.2
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.1e-103 379.4 335 61.8
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.1e-102 377.1 335 62.1
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 4.4e-101 371.7 335 60.6
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 9.8e-101 370.5 333 60.1
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 2.4e-99 365.9 335 58.8
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 3.5e-98 362.1 336 59.8
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.3e-97 359.4 335 59.7
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 8.6e-97 357.5 335 59.7
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.9e-96 356.3 335 59.4
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 1.9e-96 356.3 334 59.3
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.9e-96 356.3 335 59.1
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.5e-96 355.9 320 60.0
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 5.6e-96 354.8 335 57.3
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 7.3e-96 354.4 335 57.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 7.3e-96 354.4 335 57.0
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.1e-95 352.8 335 57.0
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.1e-95 352.8 335 59.1
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 8.1e-95 350.9 327 56.9
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.1e-94 350.5 335 57.0
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.4e-94 350.1 335 57.9
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.3e-94 349.4 335 58.8
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 2.3e-94 349.4 322 58.7
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 4.0e-94 348.6 322 57.8
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.0e-94 348.6 335 57.3
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 8.9e-94 347.4 322 57.8
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.2e-93 347.1 336 56.2
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.2e-93 347.1 354 55.6
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.2e-93 347.1 322 58.4
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.2e-93 347.1 322 58.4
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 4.4e-93 345.1 335 55.5
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 7.6e-93 344.4 335 55.5
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 9.9e-93 344.0 322 57.1
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 9.9e-93 344.0 335 54.9
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 1.3e-92 343.6 327 56.0
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.3e-92 343.6 335 56.1
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 6.4e-92 341.3 320 58.1
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.4e-92 341.3 335 56.7
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 8.4e-92 340.9 335 56.4
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 8.4e-92 340.9 316 58.2
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 3.2e-91 339.0 334 55.4
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 4.1e-91 338.6 321 57.0
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 9.2e-91 337.4 320 57.2
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 2.1e-90 336.3 322 57.8
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 2.3e-89 332.8 335 54.0
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 3.0e-89 332.4 335 55.5
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.9e-88 329.7 333 53.5
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 4.3e-88 328.6 329 53.8
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 5.6e-88 328.2 328 54.6
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 3.6e-87 325.5 324 55.6
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.1e-86 323.9 322 55.6
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 5.2e-86 321.6 335 51.9
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 3.4e-85 318.9 327 55.4
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 2.9e-84 315.8 323 53.3
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 8.4e-84 314.3 343 51.0
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 8.4e-84 314.3 322 52.5
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 4.2e-83 312.0 343 50.4
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 7.1e-83 311.2 335 50.4
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 7.1e-83 311.2 321 53.0
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 2.7e-82 309.3 336 52.1
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 6.0e-82 308.1 322 52.8
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 1.0e-81 307.4 322 50.9
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.0e-81 307.4 327 51.4
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.3e-81 307.0 323 52.9
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 6.6e-81 304.7 299 55.2
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 8.7e-81 304.3 327 50.8
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 8.7e-81 304.3 327 50.8
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 1.1e-80 303.9 322 49.4
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.3e-80 301.2 318 50.6
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.6e-79 300.1 322 50.3
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 2.8e-79 299.3 322 50.3
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 2.8e-79 299.3 322 50.3
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 3.1e-78 295.8 327 48.0
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 9.0e-78 294.3 322 50.9
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.2e-77 293.9 328 49.4
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.5e-77 293.5 322 48.4
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 9.9e-77 290.8 324 49.7
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 9.9e-77 290.8 327 50.5
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.3e-76 290.4 312 52.9
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.7e-76 290.0 322 48.4
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 2.9e-76 289.3 320 48.8
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 3.8e-76 288.9 330 48.2
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 4.9e-76 288.5 322 48.1
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 6.4e-76 288.1 321 48.9
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 8.4e-76 287.7 325 47.7
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 2.4e-75 286.2 320 48.1
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 7.1e-75 284.6 322 47.2
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 2.1e-74 283.1 320 47.5
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.1e-74 283.1 339 49.0
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.7e-74 282.7 329 49.5
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 3.5e-74 282.3 322 47.2
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 7.9e-74 281.2 320 47.2
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.9e-74 281.2 293 54.3
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.3e-73 280.4 322 46.6
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 8.1e-71 271.2 319 49.8
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.6e-69 266.2 254 54.7
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.7e-68 263.5 349 45.6
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 2.2e-68 263.1 387 40.1
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 6.4e-68 261.5 322 41.9
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.6e-63 246.9 308 46.4
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.4e-62 243.0 254 57.5
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 5.5e-59 231.9 328 42.4
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 3.0e-57 226.1 141 78.0
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 5.7e-56 221.9 154 68.8
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.0e-52 211.1 318 40.3
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 2.9e-52 209.5 154 66.2
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 2.9e-52 209.5 260 49.6
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.2e-51 206.1 269 42.8
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.7e-50 203.0 335 37.6
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 1.3e-49 200.7 154 66.2
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 7.7e-45 184.9 248 39.5
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 8.5e-44 181.4 184 48.9
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 8.5e-44 181.4 117 75.2
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 1.6e-42 177.2 127 70.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 6.1e-42 175.3 279 38.7
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.6e-40 169.9 272 39.3
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 2.6e-40 169.9 266 38.0
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.4e-38 164.1 234 41.0
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.1e-34 150.2 261 37.2
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.7e-31 139.4 194 43.3
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.5e-29 132.9 172 48.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.7e-28 130.6 77 84.4
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.8e-22 110.5 160 43.8
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.1e-14 84.7 136 32.4
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 2.9e-12 76.6 41 92.7
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.1e-11 74.7 41 92.7
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.2e-11 72.0 41 85.4
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 8.0e-10 68.6 42 76.2
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 3.4e-08 63.2 30 90.0


User provided reference genes

Program Settings