Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 0.0e+00 1522.3 880 100.0
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 1.0e-293 1013.4 885 72.9
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 2.0e-233 813.1 790 69.5
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 2.6e-233 812.8 917 61.1
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 1.4e-226 790.4 898 60.9
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 4.5e-217 758.8 929 58.1
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 2.5e-215 753.1 958 56.4
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.2e-212 744.2 923 56.7
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 5.4e-210 735.3 915 58.4
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 9.1e-210 734.6 912 57.3
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 2.3e-208 729.9 939 57.5
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 2.0e-204 716.8 916 56.2
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 9.2e-202 708.0 952 55.6
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 2.0e-201 706.8 991 53.0
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 5.7e-196 688.7 908 55.5
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 7.5e-196 688.3 956 53.3
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 9.8e-196 688.0 929 56.5
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 6.4e-195 685.3 912 53.6
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 5.9e-193 678.7 924 55.4
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.9e-191 673.7 961 53.3
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 8.9e-189 664.8 980 52.1
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 3.4e-188 662.9 928 52.5
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 3.2e-186 656.4 930 52.7
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 6.0e-185 652.1 944 50.4
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 1.7e-184 650.6 916 53.4
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 3.6e-182 642.9 944 51.8
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 4.7e-182 642.5 745 56.2
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 5.8e-180 635.6 928 49.6
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 8.3e-179 631.7 906 52.8
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 2.7e-177 626.7 950 51.6
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 3.3e-175 619.8 822 56.2
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 7.8e-169 598.6 749 59.4
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 1.1e-167 594.7 783 56.1
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 2.6e-164 583.6 918 50.9
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 2.6e-164 583.6 579 59.4
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 2.6e-164 583.6 939 48.9
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 2.9e-163 580.1 798 55.3
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 2.4e-162 577.0 1011 47.6
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 5.4e-162 575.9 928 49.2
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 5.4e-162 575.9 773 56.7
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 1.9e-159 567.4 956 46.9
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 4.8e-158 562.8 820 51.5
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 1.4e-157 561.2 997 48.6
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 2.0e-156 557.4 918 45.6
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 2.6e-156 557.0 1011 46.3
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 5.4e-154 549.3 1014 45.3
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 2.1e-153 547.4 587 58.4
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 1.3e-152 544.7 1036 45.8
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 8.7e-152 542.0 897 44.7
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 1.5e-151 541.2 744 55.9
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 1.5e-151 541.2 998 46.0
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 5.8e-148 529.3 917 46.7
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 1.7e-147 527.7 843 51.1
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 1.7e-147 527.7 726 56.6
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 3.2e-146 523.5 1053 43.7
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 4.2e-146 523.1 768 47.5
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 7.1e-146 522.3 950 45.4
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 4.6e-145 519.6 986 46.1
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 3.3e-143 513.5 765 54.9
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 2.8e-142 510.4 777 52.3
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 7.6e-140 502.3 949 44.0
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 7.1e-138 495.7 684 47.8
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 9.0e-133 478.8 777 43.0
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 1.7e-131 474.6 832 45.8
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 1.1e-130 471.9 741 46.3
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 1.9e-130 471.1 514 55.6
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 3.6e-129 466.8 692 47.0
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 1.8e-128 464.5 702 46.7
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.8e-128 464.5 971 42.3
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 1.4e-125 454.9 675 46.5
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 1.2e-124 451.8 960 43.0
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 1.3e-123 448.4 761 50.1
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 2.9e-123 447.2 675 45.6
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 6.1e-121 439.5 950 41.6
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 6.1e-121 439.5 897 41.4
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 9.7e-119 432.2 789 46.1
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 1.4e-117 428.3 723 42.9
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 1.4e-117 428.3 924 45.2
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 2.0e-116 424.5 925 43.9
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 4.5e-116 423.3 807 43.4
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 3.8e-115 420.2 735 50.2
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 4.2e-114 416.8 982 42.6
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.7e-110 404.8 855 44.3
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 2.4e-109 401.0 786 41.0
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 3.1e-109 400.6 733 47.7
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 5.2e-104 383.3 603 56.1
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 1.2e-103 382.1 796 39.8
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.5e-103 381.7 613 51.4
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 1.1e-98 365.5 1014 36.9
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.8e-94 350.9 337 59.3
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.4e-93 347.8 362 56.9
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 3.1e-93 347.4 833 39.6
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 7.3e-82 309.7 1027 35.2
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 2.8e-81 307.8 549 43.2
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 4.0e-80 303.9 624 40.5
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 7.3e-74 283.1 1043 30.8
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 2.8e-73 281.2 918 37.5
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 3.1e-72 277.7 539 43.0
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 5.1e-67 260.4 394 44.2
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 5.6e-66 256.9 825 33.8
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 1.3e-59 235.7 675 38.1
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 4.6e-52 210.7 140 82.9
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 1.6e-41 175.6 539 33.2
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 3.0e-35 154.8 145 64.8
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.1e-34 152.9 146 58.2
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 3.3e-34 151.4 143 62.9
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 2.1e-33 148.7 148 58.8
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 4.8e-33 147.5 146 55.5
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 6.2e-33 147.1 145 63.4
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 1.2e-31 142.9 142 53.5
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 4.5e-31 141.0 155 53.5
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 3.2e-29 134.8 133 57.9
Cpa.g.c37452 Carica papaya HOM05D006512 ORTHO05D008027 7.2e-13 80.5 68 70.6
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 2.1e-12 79.0 166 35.5
Nn6g32350 Nelumbo nucifera HOM05D006512 ORTHO05D008027 2.3e-11 75.5 155 44.5
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 8.8e-11 73.6 86 47.7
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 7.4e-10 70.5 77 45.5
SEGI_06729 Sequoiadendron giganteum HOM05D002594 ORTHO05D003499 2.2e-06 58.9 107 33.6
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 3.8e-06 58.2 92 33.7
TWI74G1222 Tripterygium wilfordii HOM05D002594 ORTHO05D003499 6.5e-06 57.4 182 24.7
FvH4_2g00353 Fragaria vesca HOM05D006512 ORTHO05D008027 8.5e-06 57.0 49 59.2
Potri.007G070700 Populus trichocarpa HOM05D002594 ORTHO05D003499 8.5e-06 57.0 174 25.9


User provided reference genes

Program Settings