Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.9e-201 705.7 359 100.0
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 8.3e-101 371.3 238 82.4
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 5.2e-71 272.3 154 87.0
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 2.2e-69 266.9 154 85.1
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 1.1e-68 264.6 154 85.1
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 1.1e-68 264.6 154 85.1
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 1.7e-66 257.3 154 83.1
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 2.3e-66 256.9 154 80.5
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 2.3e-66 256.9 155 80.6
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 3.0e-66 256.5 154 80.5
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 5.1e-66 255.8 154 80.5
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 1.3e-64 251.1 154 79.9
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 2.8e-64 250.0 154 79.9
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 3.6e-64 249.6 154 77.3
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 4.8e-64 249.2 158 74.7
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 8.1e-64 248.4 154 76.6
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 2.4e-63 246.9 154 78.6
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 3.1e-63 246.5 181 68.5
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 9.0e-63 245.0 154 76.0
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 4.4e-62 242.7 155 77.4
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 7.6e-62 241.9 154 78.6
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 2.9e-61 240.0 154 77.3
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 4.9e-61 239.2 155 74.2
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 6.4e-61 238.8 154 76.0
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 8.4e-61 238.4 155 76.1
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 8.4e-61 238.4 154 76.0
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 8.4e-61 238.4 154 76.0
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 1.1e-60 238.0 154 76.0
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 9.3e-60 235.0 156 73.1
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 1.2e-59 234.6 154 74.7
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.6e-59 234.2 189 63.5
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 2.7e-59 233.4 155 74.2
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 4.6e-59 232.6 159 72.3
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 7.8e-59 231.9 157 73.2
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 1.3e-58 231.1 154 74.0
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.7e-58 230.7 172 66.3
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 3.0e-58 229.9 154 73.4
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 1.1e-57 228.0 154 73.4
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 1.1e-57 228.0 154 72.7
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 1.9e-57 227.3 155 74.2
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 5.6e-57 225.7 155 69.7
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 7.3e-57 225.3 155 71.0
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 7.3e-57 225.3 154 69.5
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 7.3e-57 225.3 170 67.6
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 9.6e-57 224.9 154 69.5
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 8.1e-56 221.9 155 71.0
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 1.1e-55 221.5 142 74.6
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 1.1e-55 221.5 154 68.8
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 1.8e-55 220.7 155 71.0
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 2.4e-55 220.3 155 69.0
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 4.0e-55 219.5 155 70.3
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.5e-54 217.6 153 66.7
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 2.6e-54 216.9 154 68.8
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-54 216.5 191 60.7
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 5.8e-54 215.7 154 66.9
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 5.8e-54 215.7 154 68.2
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 7.6e-54 215.3 154 68.2
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 2.9e-53 213.4 155 71.0
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.4e-52 211.1 155 69.7
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 4.2e-52 209.5 155 67.7
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 4.2e-52 209.5 154 69.5
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 1.2e-51 208.0 164 64.6
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 2.1e-51 207.2 155 66.5
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 2.1e-51 207.2 155 66.5
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 2.1e-51 207.2 155 66.5
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 2.1e-51 207.2 155 69.0
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 2.7e-51 206.8 154 64.9
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 3.5e-51 206.5 155 66.5
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 3.5e-51 206.5 155 66.5
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.5e-51 206.5 155 64.5
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 4.6e-51 206.1 155 67.1
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 6.0e-51 205.7 155 65.2
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 6.0e-51 205.7 155 65.2
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 7.9e-51 205.3 156 66.7
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 1.3e-50 204.5 155 64.5
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 1.8e-50 204.1 154 64.9
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 1.8e-50 204.1 155 66.5
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 2.3e-50 203.8 155 65.2
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 3.9e-50 203.0 155 64.5
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 5.1e-50 202.6 180 61.7
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 6.7e-50 202.2 155 64.5
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 8.7e-50 201.8 155 63.2
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.5e-49 201.1 152 69.1
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 1.5e-49 201.1 188 58.5
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 1.9e-49 200.7 185 58.9
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 3.3e-49 199.9 184 59.2
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 5.6e-49 199.1 155 64.5
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 9.6e-49 198.4 156 64.7
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 2.4e-47 193.7 124 75.8
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 2.6e-46 190.3 155 60.6
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 1.0e-45 188.3 141 69.5
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 1.4e-44 184.5 154 58.4
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 3.2e-44 183.3 158 60.1
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 5.5e-44 182.6 154 61.7
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 6.7e-42 175.6 160 57.5
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 9.6e-41 171.8 156 57.1
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 3.2e-36 156.8 105 72.4
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 1.2e-35 154.8 172 47.7
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 4.6e-35 152.9 172 48.3
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 4.6e-35 152.9 155 53.5
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 7.4e-33 145.6 162 48.1
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 6.9e-31 139.0 157 45.2
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-30 137.9 166 43.4
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 7.2e-28 129.0 169 46.7
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-27 127.9 165 47.3
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 2.1e-27 127.5 112 60.7
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 3.6e-27 126.7 169 46.7
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 8.8e-26 122.1 94 62.8
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 7.4e-25 119.0 171 38.6
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 9.7e-25 118.6 105 59.0
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 2.8e-24 117.1 173 46.2
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 8.2e-24 115.5 172 38.4
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-23 115.2 169 42.0
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 5.3e-23 112.8 70 75.7
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-22 110.2 151 43.7
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 5.9e-22 109.4 115 53.9
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 5.0e-21 106.3 164 42.7
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 2.7e-19 100.5 133 39.1
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 3.6e-19 100.1 76 64.5
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 4.7e-19 99.8 143 39.9
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 3.0e-18 97.1 71 69.0
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 3.0e-18 97.1 134 38.8
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 8.8e-18 95.5 59 74.6
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 1.5e-17 94.7 132 42.4
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 2.0e-17 94.4 182 33.5
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-16 90.9 178 35.4
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 3.7e-16 90.1 135 40.0
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 8.2e-16 89.0 146 36.3
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-15 87.4 133 37.6
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-14 84.7 136 38.2
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-14 84.0 134 35.1
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-14 83.2 104 44.2
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 5.9e-14 82.8 126 40.5
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 5.9e-14 82.8 134 34.3
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.0e-13 82.0 157 30.6
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-12 77.4 181 33.1
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 3.2e-12 77.0 164 30.5
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 5.5e-12 76.3 185 28.1
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-11 73.9 132 33.3
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 8.0e-11 72.4 103 47.6
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-10 72.0 155 29.0
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-10 70.5 131 32.1
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-10 70.5 125 32.8
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 8.8e-10 68.9 130 32.3
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-09 67.4 133 30.1
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.6e-09 67.4 101 40.6
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-08 64.7 147 28.6
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 4.8e-08 63.2 103 39.8
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 5.3e-07 59.7 30 93.3
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-06 58.2 64 45.3
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-06 57.0 127 29.1


User provided reference genes

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