Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 2.4e-153 545.4 266 100.0
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 8.5e-143 510.4 301 87.0
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.9e-135 485.3 302 81.1
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 5.0e-135 484.6 302 81.1
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 9.1e-129 463.8 302 77.8
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.6e-128 463.0 302 77.8
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 5.9e-128 461.1 302 76.2
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.2e-127 459.1 302 74.8
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.9e-127 458.8 299 77.3
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.9e-127 458.8 299 75.9
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.9e-126 456.1 299 76.6
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.5e-126 455.7 301 78.1
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.5e-126 455.7 302 76.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 2.5e-126 455.7 302 76.2
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 9.4e-126 453.8 303 74.9
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 9.4e-126 453.8 303 74.9
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 9.4e-126 453.8 303 74.9
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.2e-125 453.4 303 74.9
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 2.7e-125 452.2 303 74.6
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 3.6e-125 451.8 300 73.7
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 3.6e-125 451.8 297 76.4
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 3.6e-125 451.8 301 74.8
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 3.6e-125 451.8 302 75.5
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 6.1e-125 451.1 300 76.3
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 6.1e-125 451.1 301 75.1
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 6.1e-125 451.1 289 77.9
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.0e-124 450.3 292 76.4
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.0e-124 450.3 301 76.1
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.8e-124 449.5 301 74.4
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 5.2e-124 448.0 300 76.0
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.2e-123 446.8 302 73.8
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 2.6e-123 445.7 301 73.8
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 7.5e-123 444.1 300 75.3
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.3e-122 443.4 301 73.4
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.7e-122 443.0 297 72.7
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.7e-122 443.0 301 73.4
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 2.2e-122 442.6 300 72.0
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 2.8e-122 442.2 319 72.4
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 6.3e-122 441.0 299 73.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 1.4e-121 439.9 298 74.2
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 4.1e-121 438.3 299 73.6
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 7.0e-121 437.6 301 74.8
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.6e-120 436.4 298 72.1
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.5e-120 435.3 301 73.8
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.3e-119 433.3 299 72.2
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.7e-119 433.0 301 73.1
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 3.8e-119 431.8 316 70.6
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 3.8e-119 431.8 302 71.5
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 8.5e-119 430.6 301 72.8
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.1e-118 430.3 298 71.5
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.5e-118 429.9 322 69.3
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.2e-118 428.7 313 68.4
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 5.5e-118 427.9 289 74.4
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.0e-116 423.7 300 70.0
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.0e-116 423.7 298 68.8
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.4e-116 423.3 299 69.9
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.4e-116 423.3 278 76.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 2.3e-116 422.5 300 69.7
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 3.0e-116 422.2 299 70.9
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 6.8e-116 421.0 350 63.4
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.5e-115 419.9 300 69.3
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.0e-115 419.5 296 70.6
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 2.6e-115 419.1 299 70.6
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.4e-115 418.7 296 70.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 5.7e-115 417.9 296 70.3
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 7.5e-115 417.5 299 69.2
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 7.5e-115 417.5 301 67.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 9.8e-115 417.2 294 70.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.3e-114 416.8 296 67.6
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.8e-114 415.6 296 69.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.8e-114 415.6 296 69.9
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 7.0e-113 411.0 291 71.5
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 7.0e-113 411.0 299 68.6
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.7e-112 409.1 299 68.9
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.9e-111 405.6 297 67.3
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 3.8e-111 405.2 335 63.6
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 5.0e-111 404.8 294 66.3
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 6.5e-111 404.4 299 64.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.1e-110 403.7 294 65.6
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 3.2e-110 402.1 295 69.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 4.2e-110 401.7 321 64.5
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 9.5e-110 400.6 293 65.9
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.6e-109 399.8 260 76.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.1e-109 399.4 297 63.3
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 3.6e-109 398.7 296 64.9
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 6.8e-108 394.4 300 65.0
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.2e-107 393.7 299 66.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.0e-107 392.9 292 68.2
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 5.4e-105 384.8 292 64.0
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 1.4e-100 370.2 290 63.4
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 3.0e-100 369.0 268 67.9
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 3.0e-100 369.0 301 60.5
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 1.4e-97 360.1 223 78.5
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.1e-92 344.0 301 58.5
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 1.3e-90 337.0 201 83.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 5.2e-84 315.1 204 75.0
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.4e-81 307.0 288 53.5
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 7.1e-81 304.7 286 54.9
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.6e-80 303.5 291 56.0
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.3e-79 299.7 192 72.4
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 1.6e-72 276.9 287 51.9
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.3e-66 257.3 169 75.7
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 9.3e-57 224.6 169 65.7
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.6e-54 215.3 159 67.3
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 4.5e-51 205.7 259 44.0
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 7.1e-49 198.4 141 69.5
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.3e-39 167.5 142 64.8
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.3e-39 166.8 147 59.9
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.5e-30 137.5 117 63.2
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 1.0e-26 124.8 109 58.7
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.3e-26 124.4 74 85.1
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 9.4e-25 118.2 100 60.0
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.0e-22 110.5 335 26.0
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 4.8e-21 105.9 60 76.7
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.1e-20 102.8 57 87.7
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 7.7e-19 98.6 55 80.0
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 9.4e-17 91.7 207 28.5
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 4.4e-14 82.8 295 25.4


User provided reference genes

Program Settings