Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.2e-123 446.4 217 100.0
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.9e-92 342.8 179 90.5
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.2e-88 329.3 180 87.2
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 8.3e-88 327.4 180 86.7
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 7.0e-87 324.3 190 81.1
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 2.7e-86 322.4 190 81.1
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 1.3e-85 320.1 190 79.5
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 8.6e-85 317.4 190 78.9
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 4.7e-83 311.6 179 79.9
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 3.1e-82 308.9 181 79.6
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 8.9e-82 307.4 183 75.4
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 2.0e-81 306.2 180 77.2
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.6e-81 305.8 180 77.2
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.6e-81 305.8 180 77.2
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 9.8e-81 303.9 181 76.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.2e-80 302.8 179 78.2
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 8.3e-80 300.8 181 77.9
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 5.4e-79 298.1 179 76.0
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.3e-77 293.5 190 69.5
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 2.3e-77 292.7 183 73.2
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 8.6e-77 290.8 190 68.9
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.5e-76 290.0 190 68.4
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.5e-76 290.0 180 73.9
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.9e-76 289.7 190 67.9
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.9e-76 289.7 188 69.7
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.3e-76 288.9 181 70.2
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 5.6e-76 288.1 190 68.4
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 9.5e-76 287.3 183 72.1
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 1.6e-75 286.6 185 70.8
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 2.1e-75 286.2 205 66.8
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 2.8e-75 285.8 178 73.0
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 3.6e-75 285.4 186 71.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 3.1e-74 282.3 178 71.9
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.1e-74 282.3 178 71.9
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 4.0e-74 282.0 179 72.6
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.2e-73 280.4 185 68.1
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.2e-73 280.4 178 70.8
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.2e-73 280.4 178 70.8
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 3.4e-73 278.9 179 72.1
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 2.2e-72 276.2 179 69.3
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 3.2e-71 272.3 178 70.2
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 4.1e-71 271.9 238 56.7
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 7.1e-71 271.2 188 67.0
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.6e-70 270.0 188 65.4
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 2.7e-70 269.2 188 65.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 2.7e-70 269.2 183 68.9
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.6e-70 268.5 188 67.0
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 6.0e-70 268.1 188 67.0
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 1.0e-69 267.3 178 69.7
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.3e-69 266.9 176 69.3
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 1.3e-69 266.9 180 68.9
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 3.0e-69 265.8 179 70.9
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.9e-69 265.4 180 68.9
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 5.1e-69 265.0 180 68.3
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 5.1e-69 265.0 180 68.3
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 5.1e-69 265.0 180 68.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 8.6e-69 264.2 179 68.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.1e-68 263.8 179 67.0
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 1.5e-68 263.5 207 60.4
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 3.3e-68 262.3 188 62.8
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 4.3e-68 261.9 180 67.8
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 4.3e-68 261.9 180 67.8
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 7.3e-68 261.2 182 65.9
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.6e-67 260.0 182 65.9
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 3.6e-67 258.8 179 65.4
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 4.7e-67 258.5 179 65.9
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 6.2e-67 258.1 179 67.0
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 4.0e-66 255.4 182 64.8
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 4.0e-66 255.4 180 66.7
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 4.0e-66 255.4 181 65.2
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 8.9e-66 254.2 179 63.7
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 2.6e-65 252.7 179 64.2
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 5.8e-65 251.5 180 65.6
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.7e-64 250.0 187 62.0
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 2.4e-63 246.1 177 64.4
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 4.1e-63 245.4 179 67.6
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 7.8e-62 241.1 194 57.7
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.3e-61 240.4 178 61.2
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 9.6e-60 234.2 179 61.5
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 4.7e-59 231.9 180 60.0
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 3.1e-58 229.2 137 76.6
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.0e-58 228.8 181 60.2
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 4.0e-58 228.8 181 60.2
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 5.2e-58 228.4 217 57.1
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.2e-57 227.3 181 59.7
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.5e-52 209.5 147 63.3
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.5e-52 209.5 147 63.3
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 7.6e-49 198.0 186 49.5
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.9e-48 195.3 176 48.9
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.1e-47 194.1 139 61.2
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.5e-44 183.7 137 56.2
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 9.6e-44 181.0 152 55.9
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 8.1e-43 177.9 106 75.5
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.1e-42 177.6 167 48.5
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 2.4e-42 176.4 186 44.1
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 6.9e-42 174.9 204 43.6
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 4.5e-41 172.2 177 43.5
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 9.9e-41 171.0 106 72.6
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.9e-40 168.7 118 67.8
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 9.3e-39 164.5 118 66.9
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.5e-31 139.8 100 63.0
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 4.6e-30 135.6 88 69.3
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.9e-29 132.5 169 40.2
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 3.1e-26 122.9 171 40.4
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.2e-25 120.9 199 36.7
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.8e-24 115.9 98 53.1
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 9.3e-23 111.3 80 57.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.7e-22 109.8 145 39.3
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.6e-14 84.0 105 41.0
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 4.6e-14 82.4 105 40.0
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 3.9e-13 79.3 46 76.1
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.7e-11 73.9 74 51.4
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 6.3e-11 72.0 42 73.8
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 6.3e-11 72.0 43 72.1
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 8.2e-11 71.6 42 76.2
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 8.2e-11 71.6 126 35.7
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-10 70.9 126 34.9
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-10 70.9 126 34.9
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-10 70.9 126 34.9
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 2.4e-10 70.1 144 31.9
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 3.1e-10 69.7 42 71.4
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 1.2e-09 67.8 39 74.4
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.5e-09 67.4 76 44.7
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 5.0e-08 62.4 84 41.7
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.4e-07 60.8 37 62.2
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 5.5e-07 58.9 56 51.8
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 2.1e-06 57.0 56 50.0
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 4.7e-06 55.8 52 51.9
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 6.1e-06 55.5 66 40.9


User provided reference genes

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