Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07657 Corylus avellana HOM05D000041 ORTHO05D006140 3.0e-162 575.1 282 100.0
CiPaw.11G047400 Carya illinoinensis HOM05D000041 ORTHO05D006140 5.2e-74 282.0 296 55.1
Ciclev10020015m.g Citrus clementina HOM05D000041 ORTHO05D006140 1.3e-72 277.3 296 53.0
QL10p017885 Quercus lobata HOM05D000041 ORTHO05D006140 1.3e-72 277.3 321 51.4
Dinv38747 Davidia involucrata HOM05D000041 ORTHO05D006140 4.1e-71 272.3 296 52.4
Rhsim12G0153700 Rhododendron simsii HOM05D000041 ORTHO05D006140 7.3e-68 261.5 296 50.7
Atru.chr9.344 Acer truncatum HOM05D000041 ORTHO05D006140 9.5e-68 261.2 296 50.0
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 4.7e-67 258.8 296 51.7
TWI60G1324 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 1.0e-66 257.7 298 51.0
CSS0043787 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 1.4e-66 257.3 296 50.0
CsaV3_1G002560 Cucumis sativus L. HOM05D000041 ORTHO05D006140 2.3e-66 256.5 296 50.0
TWI81G0058 Tripterygium wilfordii HOM05D000041 ORTHO05D006140 1.2e-65 254.2 299 50.5
MELO3C017192.2 Cucumis melo HOM05D000041 ORTHO05D006140 2.0e-65 253.4 296 49.7
Hma1.2p1_0060F.1_g033480 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 4.4e-65 252.3 296 50.0
Prupe.5G198700 Prunus persica HOM05D000041 ORTHO05D006140 4.4e-65 252.3 296 49.0
Actinidia04865 Actinidia chinensis HOM05D000041 ORTHO05D006140 9.8e-65 251.1 296 50.0
Hma1.2p1_2933F.1_g330550 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 1.3e-64 250.8 296 49.7
Actinidia19018 Actinidia chinensis HOM05D000041 ORTHO05D006140 1.7e-64 250.4 296 48.6
FvH4_5g14510 Fragaria vesca HOM05D000041 ORTHO05D006140 3.2e-63 246.1 300 49.0
FAN18G2506 Fragaria x ananassa HOM05D000041 ORTHO05D006140 3.2e-63 246.1 300 49.0
vmacro16523 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 4.1e-63 245.7 279 49.5
Lj1g0011184 Lotus japonicus HOM05D000041 ORTHO05D006140 5.4e-63 245.4 298 49.0
Eucgr.B00542 Eucalyptus grandis HOM05D000041 ORTHO05D006140 7.0e-63 245.0 329 45.9
RcHm_v2.0_Chr7g0182141 Rosa chinensis HOM05D000041 ORTHO05D006140 7.0e-63 245.0 300 49.0
Duzib205G1692 Durio zibethinus HOM05D000041 ORTHO05D006140 9.2e-63 244.6 295 49.5
MD14G1205300 Malus domestica HOM05D000041 ORTHO05D006140 2.7e-62 243.0 295 49.2
TPR.G12274 Trifolium pratense HOM05D000041 ORTHO05D006140 2.7e-62 243.0 298 47.3
ClCG06G016000 Citrullus lanatus HOM05D000041 ORTHO05D006140 3.5e-62 242.7 312 46.8
Phvul.009G185000 Phaseolus vulgaris HOM05D000041 ORTHO05D006140 4.6e-62 242.3 298 47.7
Lalb_Chr11g0071711 Lupinus albus HOM05D000041 ORTHO05D006140 1.3e-61 240.7 298 47.7
MD06G1197800 Malus domestica HOM05D000041 ORTHO05D006140 1.3e-61 240.7 296 48.6
Potri.012G068100 Populus trichocarpa HOM05D000041 ORTHO05D006140 1.3e-61 240.7 296 48.3
VMungo1309G2906 Vigna mungo HOM05D000041 ORTHO05D006140 1.7e-61 240.4 298 47.3
Manes.14G081900 Manihot esculenta HOM05D000041 ORTHO05D006140 2.3e-61 240.0 296 48.6
PSO017G0721 Papaver somniferum HOM05D000041 ORTHO05D006140 3.0e-61 239.6 295 47.1
Glyma.04G165900 Glycine max HOM05D000041 ORTHO05D006140 5.0e-61 238.8 298 48.0
Lj5A107T101 Lonicera japonica HOM05D000041 ORTHO05D006140 5.0e-61 238.8 300 47.3
Lalb_Chr08g0235431 Lupinus albus HOM05D000041 ORTHO05D006140 5.0e-61 238.8 295 47.8
Glyma.06G196600 Glycine max HOM05D000041 ORTHO05D006140 8.6e-61 238.0 298 48.0
Duzib084G1175 Durio zibethinus HOM05D000041 ORTHO05D006140 1.1e-60 237.7 296 47.6
Hund11349 Selenicereus undatus HOM05D000041 ORTHO05D006140 1.1e-60 237.7 296 46.3
Gohir.A07G070500 Gossypium hirsutum HOM05D000041 ORTHO05D006140 1.5e-60 237.3 296 47.6
Gorai.001G079100 Gossypium raimondii HOM05D000041 ORTHO05D006140 1.5e-60 237.3 296 47.6
Cc04_g14400 Coffea canephora HOM05D000041 ORTHO05D006140 2.5e-60 236.5 296 47.0
Sed0001387 Sechium edule HOM05D000041 ORTHO05D006140 2.5e-60 236.5 296 47.6
Medtr3g037230 Medicago truncatula HOM05D000041 ORTHO05D006140 4.3e-60 235.7 298 46.3
Lsat_1_v5_gn_1_14381 Lactuca sativa HOM05D000041 ORTHO05D006140 1.6e-59 233.8 296 46.3
HanXRQChr04g0107201 Helianthus annuus HOM05D000041 ORTHO05D006140 2.1e-59 233.4 296 45.9
Thecc.03G094500 Theobroma cacao HOM05D000041 ORTHO05D006140 3.6e-59 232.6 296 47.3
vmacro17573 Vaccinium macrocarpon HOM05D000041 ORTHO05D006140 3.6e-59 232.6 296 49.0
FAN08G1333 Fragaria x ananassa HOM05D000041 ORTHO05D006140 4.7e-59 232.3 297 47.8
PSO478G5294 Papaver somniferum HOM05D000041 ORTHO05D000061 4.7e-59 232.3 295 46.1
Oeu052459.1 Olea europaea HOM05D000041 ORTHO05D006140 1.4e-58 230.7 296 46.6
TAR629G1015 Trochodendron aralioides HOM05D000041 ORTHO05D006140 1.4e-58 230.7 296 45.6
GSVIVG01007961001 Vitis vinifera HOM05D000041 ORTHO05D006140 2.3e-58 229.9 298 46.0
Ca_14694_v3 Cicer arietinum L. HOM05D000041 ORTHO05D006140 5.2e-58 228.8 298 44.6
Nn4g23280 Nelumbo nucifera HOM05D000041 ORTHO05D006140 1.2e-57 227.6 295 44.7
CANSAT80G0179 Cannabis sativa HOM05D000041 ORTHO05D006140 2.6e-57 226.5 296 45.3
HanXRQChr08g0236771 Helianthus annuus HOM05D000041 ORTHO05D006140 4.4e-57 225.7 296 43.9
Rhsim08G0152000 Rhododendron simsii HOM05D000041 ORTHO05D006140 5.8e-57 225.3 296 47.6
Psat5g199640 Pisum sativum HOM05D000041 ORTHO05D006140 7.5e-57 224.9 298 45.0
ECA247G0382 Erigeron canadensis HOM05D000041 ORTHO05D006140 1.7e-56 223.8 296 45.6
Gohir.D07G075000 Gossypium hirsutum HOM05D000041 ORTHO05D006140 1.7e-56 223.8 211 60.2
Nitab4.5_0002756g0120 Nicotiana tabacum HOM05D000041 ORTHO05D006140 4.9e-56 222.2 296 44.3
EL10Ac5g11065 Beta vulgaris HOM05D000041 ORTHO05D006140 6.4e-56 221.9 318 42.1
MSTRG.23000 Avicennia marina HOM05D000041 ORTHO05D006140 8.3e-56 221.5 298 45.3
PGR083G0939 Punica granatum HOM05D000041 ORTHO05D006140 1.1e-55 221.1 320 42.5
Nitab4.5_0001211g0200 Nicotiana tabacum HOM05D000041 ORTHO05D006140 2.4e-55 219.9 304 42.8
CSS0039287 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D006140 5.4e-55 218.8 296 45.3
ECA246G3346 Erigeron canadensis HOM05D000041 ORTHO05D006140 5.4e-55 218.8 296 44.3
THA.LOC104813886 Tarenaya hassleriana HOM05D000041 ORTHO05D006140 9.2e-55 218.0 296 43.9
COL.COLO4_36953 Corchorus olitorius HOM05D000041 ORTHO05D006140 2.1e-54 216.9 283 46.3
Solyc03g115720.3 Solanum lycopersicum HOM05D000041 ORTHO05D006140 2.7e-54 216.5 296 42.9
C08p32020 Brassica napus HOM05D000041 ORTHO05D006140 4.6e-54 215.7 285 44.6
CAN.G479.58 Capsicum annuum HOM05D000041 ORTHO05D006140 4.6e-54 215.7 296 43.2
CDE04G1628 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 1.0e-53 214.5 298 43.6
Lj9A467T86 Lonicera japonica HOM05D000041 ORTHO05D006140 1.3e-53 214.2 332 43.7
Sopen03g034700 Solanum pennellii HOM05D000041 ORTHO05D006140 1.3e-53 214.2 296 42.6
Ah.02g113790 Amaranthus hybridus HOM05D000041 ORTHO05D006140 1.7e-53 213.8 296 42.9
DCAR_026036 Daucus carota HOM05D000041 ORTHO05D006140 3.0e-53 213.0 296 45.3
arahy.Tifrunner.gnm1.ann1.JQ6XER Arachis hypogaea HOM05D000041 ORTHO05D006140 5.1e-53 212.2 293 45.1
CDE02G0410 Ceratophyllum demersum HOM05D000041 ORTHO05D006140 1.1e-52 211.1 296 43.9
BraA09t41355Z Brassica rapa HOM05D000041 ORTHO05D006140 1.9e-52 210.3 296 42.6
arahy.Tifrunner.gnm1.ann1.C7Z6YQ Arachis hypogaea HOM05D000041 ORTHO05D006140 2.5e-52 209.9 293 44.7
Carub.0001s1829 Capsella rubella HOM05D000041 ORTHO05D006140 3.3e-52 209.5 296 42.6
CARHR019290 Cardamine hirsuta HOM05D000041 ORTHO05D006140 3.3e-52 209.5 296 42.9
A09p59780 Brassica napus HOM05D000041 ORTHO05D006140 5.6e-52 208.8 296 42.6
BcaC07g39990 Brassica carinata HOM05D000041 ORTHO05D006140 7.3e-52 208.4 278 45.3
C08p43200 Brassica napus HOM05D000041 ORTHO05D006140 9.5e-52 208.0 300 42.0
Migut.I00214 Erythranthe guttata HOM05D000041 ORTHO05D006140 1.2e-51 207.6 283 44.5
AT1G18660 Arabidopsis thaliana HOM05D000041 ORTHO05D006140 1.6e-51 207.2 296 42.6
BolC8t51874H Brassica oleracea HOM05D000041 ORTHO05D006140 2.1e-51 206.8 300 41.7
Sp1g16630 Schrenkiella parvula HOM05D000041 ORTHO05D006140 3.6e-51 206.1 296 42.2
DCAR_016582 Daucus carota HOM05D000041 ORTHO05D006140 4.7e-51 205.7 296 42.9
A06p14770 Brassica napus HOM05D000041 ORTHO05D006140 1.1e-50 204.5 296 42.2
BraA06t24600Z Brassica rapa HOM05D000041 ORTHO05D006140 1.1e-50 204.5 296 42.2
Thhalv10007493m.g Eutrema salsugineum HOM05D000041 ORTHO05D006140 1.4e-50 204.1 296 41.6
Peaxi162Scf00274g00349 Petunia axillaris HOM05D000041 ORTHO05D006140 1.8e-50 203.8 331 39.9
BcaB07g31886 Brassica carinata HOM05D000041 ORTHO05D006140 3.1e-50 203.0 296 41.9
BcaC05g25761 Brassica carinata HOM05D000041 ORTHO05D006140 3.1e-50 203.0 296 42.2
C05p16920 Brassica napus HOM05D000041 ORTHO05D006140 3.1e-50 203.0 296 42.2
BolC5t30395H Brassica oleracea HOM05D000041 ORTHO05D006140 3.1e-50 203.0 296 42.2
BcaB03g14492 Brassica carinata HOM05D000041 ORTHO05D006140 4.0e-50 202.6 296 42.2
BcaC07g41312 Brassica carinata HOM05D000041 ORTHO05D006140 5.2e-50 202.2 300 41.3
AUR62021627 Chenopodium quinoa HOM05D000041 ORTHO05D006140 8.9e-50 201.4 301 40.9
Cpa.g.sc13.299 Carica papaya HOM05D000041 ORTHO05D006140 5.8e-49 198.7 186 60.2
ATR0730G006 Amborella trichopoda HOM05D000041 ORTHO05D006140 7.6e-49 198.4 296 39.5
Aa31LG7G3420 Aethionema arabicum HOM05D000041 ORTHO05D006140 4.9e-48 195.7 322 39.8
FAN13G2854 Fragaria x ananassa HOM05D000041 ORTHO05D006140 8.4e-48 194.9 144 70.1
TAR371G0053 Trochodendron aralioides HOM05D000041 ORTHO05D006140 1.4e-47 194.1 143 66.4
Aqoxy3G03493 Aquilegia oxysepala HOM05D000041 ORTHO05D006140 3.2e-47 193.0 296 41.2
MBI16_g06793_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D006140 2.7e-46 189.9 147 65.3
unitig_0.g773 Utricularia gibba HOM05D000041 ORTHO05D006140 3.5e-46 189.5 295 40.7
Zm00001eb020460 Zea mays HOM05D000041 ORTHO05D006140 3.0e-45 186.4 296 38.2
Lsat_1_v5_gn_5_21580 Lactuca sativa HOM05D000041 ORTHO05D006140 5.6e-44 182.2 350 36.0
Dinv10659 Davidia involucrata HOM05D000041 ORTHO05D006140 2.1e-43 180.3 242 46.7
SGA_v2.0_scaffold313G48328 Striga asiatica HOM05D000041 ORTHO05D006140 1.4e-42 177.6 143 62.9
HPP92_021256 Vanilla planifolia HOM05D000041 ORTHO05D006140 3.1e-42 176.4 187 53.5
SEGI_30138 Sequoiadendron giganteum HOM05D000041 ORTHO05D006140 2.4e-34 150.2 301 34.9
AL1G31110 Arabidopsis lyrata HOM05D000041 ORTHO05D006140 1.2e-30 137.9 240 38.3
Mapoly0007s0251 Marchantia polymorpha HOM05D000041 ORTHO05D006140 6.9e-26 122.1 313 30.4
AUR62008466 Chenopodium quinoa HOM05D000041 ORTHO05D006140 1.2e-25 121.3 227 35.2
AagrBONN_evm.TU.Sc2ySwM_344.2038 Anthoceros agrestis HOM05D000041 ORTHO05D006140 1.7e-24 117.5 303 30.0
Pp3c15_14620 Physcomitrium patens HOM05D000041 ORTHO05D006140 2.9e-24 116.7 296 30.4
Sc04g0002820 Simmondsia chinensis HOM05D000041 ORTHO05D006140 2.4e-23 113.6 86 67.4
BolC8t50820H Brassica oleracea HOM05D000041 ORTHO05D006140 7.1e-23 112.1 87 64.4
Sc04g0002810 Simmondsia chinensis HOM05D000041 ORTHO05D006140 3.5e-22 109.8 210 34.8
Hund09835 Selenicereus undatus HOM05D000041 ORTHO05D006140 4.6e-22 109.4 101 54.5
Sc04g0003350 Simmondsia chinensis HOM05D000041 ORTHO05D006140 1.0e-13 81.6 106 45.3
Prupe.4G066700 Prunus persica HOM05D000041 ORTHO05D006140 2.3e-13 80.5 45 84.4
Cre17.g716850 Chlamydomonas reinhardtii HOM05D000041 ORTHO05D006140 3.7e-11 73.2 100 41.0
Glyma.03G062700 Glycine max HOM05D000041 ORTHO05D006140 2.0e-09 67.4 41 75.6
MCO11G242 Micromonas commoda HOM05D000041 ORTHO05D006140 1.3e-08 64.7 45 62.2


User provided reference genes

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