Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 1.6e-58 229.2 115 100.0
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.4e-56 221.1 112 99.1
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 1.9e-46 189.1 112 82.1
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.6e-45 186.0 106 85.8
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 7.9e-45 183.7 112 82.1
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 1.7e-44 182.6 112 82.1
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 2.3e-44 182.2 112 78.6
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.3e-44 182.2 112 78.6
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.3e-44 182.2 112 78.6
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.3e-44 182.2 112 78.6
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 8.7e-44 180.3 112 77.7
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 1.1e-43 179.9 112 79.5
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 1.9e-43 179.1 112 81.2
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 1.9e-43 179.1 106 84.0
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 2.5e-43 178.7 112 79.5
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 5.6e-43 177.6 112 77.7
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 9.6e-43 176.8 112 76.8
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.8e-42 175.3 113 76.1
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 2.8e-42 175.3 112 78.6
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 2.8e-42 175.3 113 77.9
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 2.8e-42 175.3 112 75.0
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 3.6e-42 174.9 113 77.0
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 3.6e-42 174.9 112 75.0
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 3.6e-42 174.9 114 74.6
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 4.8e-42 174.5 112 77.7
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 8.1e-42 173.7 112 78.6
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 8.1e-42 173.7 112 75.9
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 8.1e-42 173.7 112 75.9
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.8e-41 172.6 112 77.7
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 2.4e-41 172.2 112 75.0
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 2.4e-41 172.2 114 74.6
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 4.0e-41 171.4 112 75.0
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 5.3e-41 171.0 112 74.1
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 5.3e-41 171.0 112 74.1
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 5.3e-41 171.0 114 73.7
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 6.9e-41 170.6 113 76.1
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 9.0e-41 170.2 112 74.1
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 2.0e-40 169.1 114 71.1
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 2.0e-40 169.1 114 71.1
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 2.6e-40 168.7 113 74.3
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 2.6e-40 168.7 113 73.5
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 4.5e-40 167.9 113 73.5
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 5.8e-40 167.5 112 72.3
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 5.8e-40 167.5 112 72.3
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 5.8e-40 167.5 112 72.3
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 7.6e-40 167.2 112 71.4
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 9.9e-40 166.8 112 73.2
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 9.9e-40 166.8 112 72.3
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.7e-39 166.0 103 77.7
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 2.2e-39 165.6 114 70.2
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 2.2e-39 165.6 112 68.8
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 2.2e-39 165.6 115 70.4
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 2.2e-39 165.6 113 72.6
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 2.2e-39 165.6 114 72.8
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 2.9e-39 165.2 112 72.3
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 6.4e-39 164.1 112 73.2
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 1.1e-38 163.3 113 71.7
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.4e-38 162.9 112 69.6
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.4e-38 162.9 115 70.4
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.4e-38 162.9 115 70.4
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 2.4e-38 162.2 112 71.4
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 3.2e-38 161.8 111 71.2
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 7.1e-38 160.6 112 75.9
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.2e-37 159.8 112 74.1
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.6e-37 159.5 113 70.8
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 2.1e-37 159.1 114 70.2
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 3.5e-37 158.3 113 72.6
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 4.6e-37 157.9 112 70.5
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 4.6e-37 157.9 113 69.0
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 4.6e-37 157.9 106 72.6
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.0e-36 156.8 113 68.1
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 2.3e-36 155.6 112 69.6
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.1e-35 153.3 112 65.2
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 2.5e-35 152.1 112 68.8
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 2.5e-35 152.1 112 68.8
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 1.3e-34 149.8 106 69.8
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 1.3e-34 149.8 106 70.8
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 2.1e-34 149.1 112 65.2
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 2.1e-34 149.1 108 68.5
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 6.2e-34 147.5 112 65.2
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 1.1e-33 146.7 113 65.5
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 1.1e-33 146.7 113 65.5
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 1.1e-33 146.7 113 64.6
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 1.4e-33 146.4 113 63.7
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 1.4e-33 146.4 113 64.6
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 1.8e-33 146.0 194 46.9
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 4.0e-33 144.8 105 65.7
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 4.0e-33 144.8 103 73.8
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 5.3e-33 144.4 115 61.7
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 1.5e-32 142.9 113 63.7
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 2.0e-32 142.5 107 61.7
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 2.6e-32 142.1 113 63.7
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 4.5e-32 141.4 113 62.8
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 3.8e-31 138.3 106 67.9
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 1.1e-30 136.7 94 70.2
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 7.9e-29 130.6 113 60.2
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 8.7e-28 127.1 107 57.9
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 9.0e-25 117.1 92 60.9
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 9.0e-25 117.1 112 54.5
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 3.8e-23 111.7 61 86.9
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 5.0e-23 111.3 113 54.9
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 1.9e-22 109.4 85 51.8
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 4.2e-22 108.2 169 40.2
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 4.6e-21 104.8 101 45.5
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 1.3e-20 103.2 63 79.4
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 1.8e-20 102.8 87 51.7
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 4.8e-18 94.7 92 47.8
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 3.4e-16 88.6 92 45.7
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 2.0e-11 72.8 97 42.3
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 2.8e-10 68.9 90 40.0
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 8.2e-10 67.4 67 47.8
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 5.3e-09 64.7 99 37.4
RcHm_v2.0_Chr2g0132441 Rosa chinensis HOM05D005873 ORTHO05D007582 5.3e-09 64.7 39 82.1
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 2.0e-08 62.8 54 51.9


User provided reference genes

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