Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 1.2e-195 686.4 363 100.0
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 5.1e-82 308.9 313 61.0
Cfa002019 Carpinus fangiana HOM05D002312 ORTHO05D000038 4.2e-76 289.3 196 81.6
Haze_06109 Corylus avellana HOM05D000052 ORTHO05D000046 1.3e-40 171.4 187 55.6
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 4.2e-36 156.4 238 44.1
Cfa002018 Carpinus fangiana HOM05D000082 ORTHO05D000038 7.5e-33 145.6 206 47.1
Cfa010553 Carpinus fangiana HOM05D006866 ORTHO05D124357 3.5e-30 136.7 100 79.0
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 3.3e-28 130.2 207 43.0
Cfa000686 Carpinus fangiana HOM05D000082 ORTHO05D000038 9.8e-25 118.6 200 45.5
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 9.8e-25 118.6 214 40.2
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 7.3e-20 102.4 223 35.0
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 1.6e-19 101.3 232 34.1
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 2.3e-18 97.4 179 36.3
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 4.0e-18 96.7 131 42.7
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 8.9e-18 95.5 131 41.2
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 2.0e-17 94.4 230 32.6
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 2.6e-17 94.0 130 43.1
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 3.4e-17 93.6 199 34.7
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 4.4e-17 93.2 130 43.1
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 5.8e-17 92.8 130 42.3
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 9.8e-17 92.0 130 42.3
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.2e-16 90.9 130 41.5
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 2.2e-16 90.9 195 34.9
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 2.2e-16 90.9 131 40.5
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 2.2e-16 90.9 195 34.9
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 2.9e-16 90.5 130 41.5
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 2.9e-16 90.5 130 41.5
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 2.9e-16 90.5 130 40.8
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 3.7e-16 90.1 130 41.5
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 4.9e-16 89.7 128 39.8
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 6.4e-16 89.4 130 40.8
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.4e-15 88.2 130 40.8
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.9e-15 87.8 172 34.9
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 5.4e-15 86.3 130 39.2
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.0e-14 84.3 187 33.7
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 4.6e-14 83.2 129 38.8
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 7.8e-14 82.4 131 39.7
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.0e-13 82.0 127 40.2
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.3e-13 80.9 65 63.1
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 3.9e-13 80.1 191 33.5
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.0e-13 79.7 187 34.2
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 6.6e-13 79.3 100 44.0
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.5e-12 78.2 112 39.3
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 3.3e-12 77.0 193 31.6
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 5.6e-12 76.3 191 31.4
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.3e-12 75.9 193 31.1
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.2e-11 75.1 194 32.0
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.2e-11 75.1 194 30.9
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 1.6e-11 74.7 131 36.6
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 2.1e-11 74.3 187 33.2
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 2.1e-11 74.3 102 44.1
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 3.6e-11 73.6 206 31.1
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.6e-11 73.6 102 43.1
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 3.6e-11 73.6 121 38.0
QL10p017081 Quercus lobata HOM05D000082 ORTHO05D000038 3.6e-11 73.6 195 35.9
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 1.4e-10 71.6 83 45.8
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 2.3e-10 70.9 195 29.2
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 2.3e-10 70.9 200 31.5
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 3.1e-10 70.5 114 34.2
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 4.0e-10 70.1 186 32.3
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 6.8e-10 69.3 191 30.4
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 8.9e-10 68.9 206 30.1
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.2e-09 68.6 207 30.4
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 1.2e-09 68.6 200 28.0
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 1.2e-09 68.6 101 37.6
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 1.5e-09 68.2 192 31.2
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 2.6e-09 67.4 64 51.6
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 2.6e-09 67.4 185 32.4
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 4.4e-09 66.6 99 40.4
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 4.4e-09 66.6 191 29.8
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 1.7e-08 64.7 195 29.2
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 2.2e-08 64.3 64 53.1
QL10p017068 Quercus lobata HOM05D000082 ORTHO05D000038 2.9e-08 63.9 177 32.2
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 3.7e-08 63.5 187 28.9
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 4.9e-08 63.2 221 28.1
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 6.4e-08 62.8 98 38.8
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.4e-07 61.6 88 39.8
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 1.9e-07 61.2 172 28.5
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 1.9e-07 61.2 101 35.6
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 2.4e-07 60.8 100 36.0
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 2.4e-07 60.8 200 26.5
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 5.4e-07 59.7 194 27.3
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 1.2e-06 58.5 201 23.9
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 2.7e-06 57.4 101 32.7
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 2.7e-06 57.4 193 26.4
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 3.5e-06 57.0 108 33.3
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 3.5e-06 57.0 193 26.9
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 6.0e-06 56.2 193 26.4


User provided reference genes

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