Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 4.1e-54 214.5 114 100.0
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 5.2e-33 144.4 114 72.8
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 4.4e-24 114.8 114 57.0
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 9.9e-24 113.6 114 57.9
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 3.8e-23 111.7 114 57.9
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 8.4e-23 110.5 112 57.1
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 9.3e-22 107.1 112 55.4
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 1.2e-21 106.7 114 57.0
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 6.0e-21 104.4 112 54.5
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 6.0e-21 104.4 112 54.5
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 6.0e-21 104.4 112 54.5
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 6.0e-21 104.4 112 54.5
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 7.8e-21 104.0 114 57.9
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 1.0e-20 103.6 114 54.4
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 1.0e-20 103.6 114 56.1
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.7e-20 102.8 112 53.6
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 1.7e-20 102.8 114 52.6
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 2.3e-20 102.4 97 60.8
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 2.3e-20 102.4 112 55.4
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 2.3e-20 102.4 115 54.8
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 5.1e-20 101.3 115 53.9
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 1.1e-19 100.1 114 51.8
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.9e-19 99.4 114 54.4
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.5e-19 99.0 114 52.6
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 3.3e-19 98.6 114 50.0
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 4.3e-19 98.2 114 53.5
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 5.6e-19 97.8 112 52.7
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 9.6e-19 97.1 114 53.5
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 1.3e-18 96.7 112 55.4
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 1.6e-18 96.3 100 57.0
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 2.8e-18 95.5 112 50.9
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 2.8e-18 95.5 104 57.7
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 3.6e-18 95.1 115 52.2
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 3.6e-18 95.1 112 51.8
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 3.6e-18 95.1 112 51.8
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 3.6e-18 95.1 110 50.9
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 4.8e-18 94.7 119 51.3
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 4.8e-18 94.7 114 52.6
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 4.8e-18 94.7 114 52.6
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 6.2e-18 94.4 114 51.8
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 8.1e-18 94.0 114 52.6
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 8.1e-18 94.0 110 50.0
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 8.1e-18 94.0 100 53.0
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.4e-17 93.2 112 53.6
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.8e-17 92.8 112 53.6
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.8e-17 92.8 101 57.4
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 2.4e-17 92.4 112 50.9
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 3.1e-17 92.0 116 53.4
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 3.1e-17 92.0 106 53.8
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 4.0e-17 91.7 111 49.5
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 4.0e-17 91.7 114 50.0
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 5.3e-17 91.3 111 52.3
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 5.3e-17 91.3 114 53.5
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 6.9e-17 90.9 111 49.5
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 6.9e-17 90.9 111 50.5
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 9.0e-17 90.5 111 48.6
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 9.0e-17 90.5 111 49.5
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 9.0e-17 90.5 111 49.5
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 9.0e-17 90.5 111 49.5
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 1.2e-16 90.1 116 52.6
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 1.2e-16 90.1 111 48.6
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.5e-16 89.7 118 49.2
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 2.0e-16 89.4 114 47.4
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 2.6e-16 89.0 111 48.6
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 4.5e-16 88.2 111 48.6
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 4.5e-16 88.2 118 49.2
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 5.8e-16 87.8 113 46.9
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 5.8e-16 87.8 114 52.6
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 7.6e-16 87.4 117 47.9
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 7.6e-16 87.4 101 52.5
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 9.9e-16 87.0 114 47.4
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 9.9e-16 87.0 114 50.9
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 1.3e-15 86.7 116 49.1
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 1.3e-15 86.7 104 51.9
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 2.2e-15 85.9 124 46.8
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 3.2e-14 82.0 113 46.0
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 7.1e-14 80.9 80 60.0
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 9.3e-14 80.5 116 50.0
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 1.2e-13 80.1 109 48.6
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 2.7e-13 79.0 100 53.0
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 4.6e-13 78.2 108 49.1
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 3.0e-12 75.5 108 48.1
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 1.1e-11 73.6 111 41.4
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 2.5e-11 72.4 129 40.3
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 2.5e-11 72.4 118 44.9
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 9.6e-11 70.5 94 51.1
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 9.6e-11 70.5 129 39.5
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 3.6e-10 68.6 123 41.5
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 8.1e-10 67.4 121 41.3
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 1.1e-09 67.0 91 49.5
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.4e-09 66.6 117 41.0
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.0e-08 62.8 69 49.3
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 2.0e-08 62.8 112 42.0
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 2.0e-08 62.8 132 36.4
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 8.4e-07 57.4 114 38.6
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 9.3e-06 53.9 67 47.8
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 9.3e-06 53.9 121 38.8


User provided reference genes

Program Settings