Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 1.2e-158 563.1 296 100.0
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 5.0e-136 488.0 302 89.4
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 2.0e-121 439.5 296 79.4
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 5.4e-90 335.1 297 62.3
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.1e-87 327.4 300 60.7
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.5e-87 327.0 295 59.7
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 2.8e-86 322.8 356 55.3
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 2.6e-84 316.2 298 56.4
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 3.8e-83 312.4 303 58.7
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 2.7e-81 306.2 296 61.8
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 3.5e-81 305.8 295 55.9
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.8e-80 303.5 295 58.3
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 3.3e-79 299.3 297 56.9
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 6.2e-78 295.0 303 55.4
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.1e-77 294.3 292 57.9
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 9.0e-77 291.2 297 57.2
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 9.0e-77 291.2 301 58.5
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.5e-76 290.4 296 56.8
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 6.4e-75 285.0 302 56.0
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 4.2e-74 282.3 299 56.5
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 1.2e-73 280.8 299 56.2
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 2.7e-73 279.6 297 54.5
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 4.6e-73 278.9 304 53.9
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 6.0e-73 278.5 299 55.2
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 6.0e-73 278.5 297 56.6
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 7.9e-73 278.1 304 53.6
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 2.3e-72 276.6 293 54.3
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 8.7e-72 274.6 308 53.6
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 6.2e-70 268.5 300 52.3
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 4.0e-69 265.8 294 54.8
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 9.0e-69 264.6 301 52.2
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.5e-68 263.8 299 52.5
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.0e-68 263.5 242 62.0
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 2.0e-68 263.5 257 58.8
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 3.4e-68 262.7 301 54.5
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 5.8e-68 261.9 213 64.8
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 5.8e-68 261.9 300 49.7
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 1.0e-67 261.2 298 52.0
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.1e-66 257.7 307 53.7
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 1.4e-66 257.3 388 43.3
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 1.9e-66 256.9 307 51.8
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 4.2e-66 255.8 298 51.3
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 7.1e-66 255.0 268 56.0
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 1.2e-65 254.2 311 50.5
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.6e-65 253.8 301 52.5
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 1.6e-65 253.8 305 50.2
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 2.7e-65 253.1 297 49.5
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 4.6e-65 252.3 304 50.0
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 1.0e-64 251.1 301 50.2
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.0e-64 251.1 240 55.4
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.0e-64 251.1 304 52.6
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 3.9e-64 249.2 315 51.7
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.3e-62 244.2 269 53.2
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.3e-62 244.2 218 62.8
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.6e-62 243.8 246 57.3
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.1e-62 243.4 254 57.9
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 4.8e-62 242.3 307 50.8
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 4.8e-62 242.3 302 51.3
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 1.4e-61 240.7 307 50.5
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 4.1e-61 239.2 298 49.3
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 6.9e-61 238.4 306 49.0
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 9.0e-61 238.0 236 55.5
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 1.2e-60 237.7 253 56.9
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.2e-60 237.7 299 52.2
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 7.6e-60 235.0 300 48.3
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 1.0e-59 234.6 320 49.1
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 2.2e-59 233.4 241 57.3
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 2.9e-59 233.0 243 58.0
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 2.9e-59 233.0 300 48.0
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 6.5e-59 231.9 211 58.3
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 8.5e-59 231.5 309 47.9
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.4e-58 230.7 306 48.7
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 1.9e-58 230.3 274 51.1
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 1.9e-58 230.3 299 47.8
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.1e-57 226.9 265 51.7
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.7e-57 226.5 305 47.5
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.3e-56 224.2 280 48.9
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 3.0e-56 223.0 311 46.0
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 3.9e-56 222.6 211 59.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 5.1e-56 222.2 255 53.7
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 1.5e-55 220.7 243 54.7
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 1.9e-55 220.3 207 59.4
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 4.3e-55 219.2 293 49.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 5.7e-55 218.8 308 48.4
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.7e-55 218.8 192 65.1
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.1e-53 214.5 222 57.7
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 1.8e-53 213.8 305 47.2
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 5.3e-53 212.2 350 41.7
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 6.9e-53 211.8 332 43.7
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.6e-52 209.9 126 88.9
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 1.0e-51 208.0 253 50.6
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 2.2e-51 206.8 195 60.5
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 2.9e-51 206.5 199 57.3
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 5.0e-51 205.7 308 46.4
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.6e-49 200.7 209 55.0
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.7e-49 199.9 286 43.7
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.8e-48 197.2 363 39.7
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 2.2e-46 190.3 201 53.2
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 4.1e-45 186.0 313 41.2
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.4e-42 177.6 179 59.2
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 9.7e-31 138.3 272 38.6
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 5.3e-29 132.5 151 55.6
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.9e-27 126.7 137 53.3
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.0e-27 125.9 219 44.7
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.9e-26 124.0 239 38.9
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 2.7e-25 120.2 226 39.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.8e-22 109.4 122 55.7
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.2e-18 96.7 154 44.8
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 4.2e-18 96.3 138 43.5
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.8e-16 90.9 60 73.3
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 2.8e-14 83.6 131 42.0
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.3e-14 82.4 122 47.5
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.1e-13 81.6 105 41.0
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.2e-12 78.2 93 51.6
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.9e-11 73.6 107 43.0
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 5.0e-11 72.8 107 38.3
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.6e-09 66.6 52 63.5
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.4e-08 64.7 42 71.4
Sabra02G0016800 Salix brachista HOM05D006975 ORTHO05D008736 9.8e-07 58.5 103 40.8


User provided reference genes

Program Settings