Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04503 Corylus avellana HOM05D006573 ORTHO05D008073 4.0e-51 204.5 107 100.0
Haze_04505 Corylus avellana HOM05D006573 ORTHO05D008073 5.1e-30 134.4 80 90.0
Haze_04495 Corylus avellana HOM05D006573 ORTHO05D008073 2.8e-28 128.6 93 78.5
Aa31sc20G120 Aethionema arabicum HOM05D006573 ORTHO05D008073 1.8e-22 109.4 89 65.2
Eucgr.B02180 Eucalyptus grandis HOM05D006573 ORTHO05D008073 2.3e-22 109.0 93 63.4
Manes.09G144600 Manihot esculenta HOM05D006573 ORTHO05D008073 3.0e-22 108.6 93 64.5
THA.LOC104805797 Tarenaya hassleriana HOM05D006573 ORTHO05D008073 3.0e-22 108.6 93 65.6
Hma1.2p1_0123F.1_g058030 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 3.9e-22 108.2 93 66.7
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 3.9e-22 108.2 93 65.6
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 6.7e-22 107.5 93 64.5
TAR362G0441 Trochodendron aralioides HOM05D006573 ORTHO05D008073 6.7e-22 107.5 93 66.7
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 8.7e-22 107.1 93 66.7
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 8.7e-22 107.1 93 66.7
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 8.7e-22 107.1 93 63.4
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 1.9e-21 105.9 93 61.3
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 2.5e-21 105.5 93 64.5
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 3.3e-21 105.1 93 64.5
CANSAT21G0678 Cannabis sativa HOM05D006573 ORTHO05D008073 4.3e-21 104.8 93 61.3
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 5.6e-21 104.4 93 62.4
Nn1g07946 Nelumbo nucifera HOM05D006573 ORTHO05D008073 5.6e-21 104.4 93 63.4
MD12G1255200 Malus domestica HOM05D006573 ORTHO05D008073 7.4e-21 104.0 93 64.5
Actinidia06814 Actinidia chinensis HOM05D006573 ORTHO05D008073 9.6e-21 103.6 93 62.4
Sabra13G0048100 Salix brachista HOM05D006573 ORTHO05D008073 1.3e-20 103.2 93 63.4
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 1.6e-20 102.8 101 59.4
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.6e-20 102.8 101 59.4
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 1.6e-20 102.8 93 66.7
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 2.1e-20 102.4 93 66.7
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 2.1e-20 102.4 93 66.7
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 2.1e-20 102.4 97 62.9
Prupe.6G356100 Prunus persica HOM05D006573 ORTHO05D008073 2.1e-20 102.4 93 63.4
Rhsim10G0138000 Rhododendron simsii HOM05D006573 ORTHO05D008073 2.1e-20 102.4 89 61.8
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 2.1e-20 102.4 93 66.7
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 2.8e-20 102.1 90 67.8
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 3.7e-20 101.7 97 61.9
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 3.7e-20 101.7 93 65.6
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 3.7e-20 101.7 93 63.4
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 6.2e-20 100.9 97 61.9
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 6.2e-20 100.9 101 57.4
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 1.4e-19 99.8 97 60.8
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 2.4e-19 99.0 89 58.4
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 2.4e-19 99.0 97 60.8
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 4.0e-19 98.2 93 60.2
CARHR008450 Cardamine hirsuta HOM05D006573 ORTHO05D008073 6.9e-19 97.4 97 62.9
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 6.9e-19 97.4 97 59.8
MBI11_g07442_MAGBIO Magnolia biondii HOM05D006573 ORTHO05D008073 6.9e-19 97.4 93 58.1
Sp1g07210 Schrenkiella parvula HOM05D006573 ORTHO05D008073 6.9e-19 97.4 93 59.1
Thecc.05G259800 Theobroma cacao HOM05D006573 ORTHO05D008073 6.9e-19 97.4 97 59.8
GSVIVG01026405001 Vitis vinifera HOM05D006573 ORTHO05D008073 9.0e-19 97.1 93 60.2
A06p05540 Brassica napus HOM05D006573 ORTHO05D008073 2.6e-18 95.5 93 59.1
BraA06t23762Z Brassica rapa HOM05D006573 ORTHO05D008073 2.6e-18 95.5 93 59.1
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 3.4e-18 95.1 89 61.8
BcaB07g34098 Brassica carinata HOM05D006573 ORTHO05D008073 5.8e-18 94.4 93 58.1
C05p06650 Brassica napus HOM05D006573 ORTHO05D008073 5.8e-18 94.4 93 58.1
BolC5t29425H Brassica oleracea HOM05D006573 ORTHO05D008073 5.8e-18 94.4 93 58.1
AUR62005294 Chenopodium quinoa HOM05D006573 ORTHO05D008073 5.8e-18 94.4 93 58.1
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 5.8e-18 94.4 93 62.4
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 5.8e-18 94.4 93 62.4
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 5.8e-18 94.4 97 58.8
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 1.3e-17 93.2 93 59.1
AUR62000660 Chenopodium quinoa HOM05D006573 ORTHO05D008073 2.9e-17 92.0 93 57.0
Thhalv10007587m.g Eutrema salsugineum HOM05D006573 ORTHO05D008073 3.8e-17 91.7 93 55.9
AL1G18980 Arabidopsis lyrata HOM05D006573 ORTHO05D008073 4.9e-17 91.3 93 57.0
Cpa.g.sc51.78 Carica papaya HOM05D006573 ORTHO05D008073 4.9e-17 91.3 93 58.1
Migut.F02066 Erythranthe guttata HOM05D006573 ORTHO05D008073 8.4e-17 90.5 93 57.0
Potri.013G053100 Populus trichocarpa HOM05D006573 ORTHO05D008073 8.4e-17 90.5 93 55.9
Gohir.D11G250400 Gossypium hirsutum HOM05D006573 ORTHO05D008073 2.4e-16 89.0 97 55.7
Gorai.007G268500 Gossypium raimondii HOM05D006573 ORTHO05D008073 2.4e-16 89.0 97 55.7
Lj2C408T2 Lonicera japonica HOM05D006573 ORTHO05D008073 2.4e-16 89.0 104 55.8
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 3.2e-16 88.6 93 61.3
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 5.5e-16 87.8 93 53.8
Ah.06g188810 Amaranthus hybridus HOM05D006573 ORTHO05D008073 7.1e-16 87.4 93 53.8
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 3.9e-14 81.6 93 51.6
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 5.1e-14 81.3 89 50.6
MSTRG.8177 Avicennia marina HOM05D006573 ORTHO05D008073 8.7e-14 80.5 93 51.6
CDE05G0683 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 8.7e-14 80.5 88 51.1
Sc09g0001730 Simmondsia chinensis HOM05D006573 ORTHO05D008073 8.7e-14 80.5 85 57.6
PSO017G7064 Papaver somniferum HOM05D006573 ORTHO05D008073 4.3e-13 78.2 97 51.5
PSO063G7541 Papaver somniferum HOM05D006573 ORTHO05D008073 4.3e-13 78.2 97 51.5
Oeu054601.1 Olea europaea HOM05D006573 ORTHO05D008073 9.6e-13 77.0 93 50.5
AT1G08550 Arabidopsis thaliana HOM05D006573 ORTHO05D008073 1.3e-12 76.6 93 50.5
Os04g0379700 Oryza sativa ssp. japonica HOM05D006573 ORTHO05D008073 3.7e-12 75.1 97 46.4
Carub.0001s0791 Capsella rubella HOM05D006573 ORTHO05D008073 4.8e-12 74.7 93 50.5
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 4.8e-12 74.7 97 50.5
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 8.2e-12 73.9 89 47.2
vmacro12852 Vaccinium macrocarpon HOM05D006573 ORTHO05D008073 1.1e-11 73.6 93 52.7
unitig_46.g17981 Utricularia gibba HOM05D006573 ORTHO05D008073 1.4e-11 73.2 98 50.0
Atru.chr2.1254 Acer truncatum HOM05D006573 ORTHO05D008073 1.8e-11 72.8 93 50.5
Lsat_1_v5_gn_7_62281 Lactuca sativa HOM05D006573 ORTHO05D008073 3.1e-11 72.0 97 50.5
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 1.3e-09 66.6 97 48.5
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 3.8e-09 65.1 93 44.1
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 1.1e-08 63.5 86 44.2
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 3.2e-08 62.0 62 53.2
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 4.2e-08 61.6 89 43.8
CiPaw.07G075700 Carya illinoinensis HOM05D006573 ORTHO05D008073 7.1e-08 60.8 90 46.7
Gohir.A11G241000 Gossypium hirsutum HOM05D006573 ORTHO05D008073 6.0e-07 57.8 97 41.2


User provided reference genes

Program Settings