Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 9.0e-226 786.6 390 100.0
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 5.5e-175 617.8 346 92.2
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 8.3e-139 497.7 283 91.5
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 8.1e-118 427.9 278 81.7
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 4.3e-111 405.6 285 78.9
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 4.0e-109 399.1 276 79.0
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.2e-100 370.9 276 74.3
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 3.4e-100 369.4 276 73.6
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 1.3e-99 367.5 277 71.8
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 2.2e-99 366.7 263 77.6
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 3.8e-99 365.9 262 76.7
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 3.8e-99 365.9 278 73.4
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 4.9e-99 365.5 277 75.1
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 4.9e-99 365.5 275 73.8
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 8.4e-99 364.8 273 72.9
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 8.4e-99 364.8 289 70.6
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.1e-98 364.4 281 72.6
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 7.1e-98 361.7 217 83.9
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 9.3e-98 361.3 274 71.5
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 1.2e-97 360.9 260 76.2
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.6e-97 360.5 274 73.7
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 2.1e-97 360.1 259 74.9
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 1.0e-96 357.8 283 70.7
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 1.3e-96 357.5 274 71.2
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 1.8e-96 357.1 261 73.9
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 3.0e-96 356.3 261 73.6
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 3.0e-96 356.3 276 72.8
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 5.1e-96 355.5 280 70.7
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 6.7e-96 355.1 280 70.0
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 6.7e-96 355.1 277 71.5
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 8.7e-96 354.8 247 76.1
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 8.7e-96 354.8 274 72.3
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 3.3e-95 352.8 280 70.0
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 4.3e-95 352.4 250 77.2
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 4.3e-95 352.4 308 64.6
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 5.7e-95 352.1 267 73.0
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 5.7e-95 352.1 284 69.4
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 7.4e-95 351.7 274 70.1
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 9.6e-95 351.3 267 70.4
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 9.6e-95 351.3 288 68.4
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 9.6e-95 351.3 277 69.7
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 9.6e-95 351.3 256 73.4
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 1.3e-94 350.9 269 71.4
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 1.6e-94 350.5 270 70.4
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 1.6e-94 350.5 275 72.0
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 2.1e-94 350.1 280 70.0
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 2.1e-94 350.1 262 73.3
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 3.7e-94 349.4 310 63.9
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 3.7e-94 349.4 216 82.4
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 4.8e-94 349.0 260 72.7
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 4.8e-94 349.0 212 83.5
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 6.3e-94 348.6 285 68.4
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 8.2e-94 348.2 235 78.7
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 8.2e-94 348.2 216 83.3
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 8.2e-94 348.2 220 80.9
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 1.4e-93 347.4 327 61.5
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 1.8e-93 347.1 277 68.2
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 1.8e-93 347.1 218 81.2
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 2.4e-93 346.7 264 70.1
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 3.1e-93 346.3 259 72.6
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 3.1e-93 346.3 275 69.1
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 4.1e-93 345.9 273 68.9
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 5.3e-93 345.5 274 69.0
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 6.9e-93 345.1 282 67.7
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 6.9e-93 345.1 275 68.0
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 6.9e-93 345.1 274 69.0
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 9.0e-93 344.7 272 68.8
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 9.0e-93 344.7 269 69.5
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 1.5e-92 344.0 274 71.2
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 1.5e-92 344.0 255 72.2
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 2.0e-92 343.6 215 80.9
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 2.6e-92 343.2 278 68.7
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 2.6e-92 343.2 282 67.0
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 2.6e-92 343.2 268 69.0
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 2.6e-92 343.2 301 65.4
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 2.6e-92 343.2 276 68.5
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.4e-92 342.8 268 71.3
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 3.4e-92 342.8 275 68.4
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 3.4e-92 342.8 281 67.3
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 5.9e-92 342.0 276 68.1
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 5.9e-92 342.0 275 68.0
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 1.0e-91 341.3 193 88.1
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 1.0e-91 341.3 272 69.5
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.0e-91 341.3 274 69.0
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 1.3e-91 340.9 281 66.9
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 1.3e-91 340.9 273 66.7
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 1.3e-91 340.9 275 69.1
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 1.3e-91 340.9 275 68.0
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.7e-91 340.5 313 62.6
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 2.2e-91 340.1 277 67.9
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 2.2e-91 340.1 274 69.0
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 2.2e-91 340.1 239 74.5
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 2.9e-91 339.7 280 67.1
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 3.8e-91 339.3 275 67.3
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 2.5e-90 336.7 279 66.7
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 2.5e-90 336.7 234 76.1
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 2.5e-90 336.7 271 66.4
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 3.2e-90 336.3 262 71.0
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 4.2e-90 335.9 259 68.3
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 9.3e-90 334.7 203 84.7
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 3.5e-89 332.8 215 80.5
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 6.1e-89 332.0 281 67.6
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 6.1e-89 332.0 233 74.7
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 7.9e-89 331.6 275 66.5
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 1.8e-88 330.5 214 78.5
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.8e-88 330.5 275 66.9
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 3.9e-88 329.3 273 66.7
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 1.1e-87 327.8 220 76.4
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 3.3e-87 326.2 234 71.4
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 7.4e-87 325.1 266 65.0
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 2.8e-86 323.2 287 66.2
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.1e-85 321.2 277 65.0
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 9.0e-85 318.2 268 66.8
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 5.5e-82 308.9 306 59.5
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 2.7e-81 306.6 204 78.9
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 7.9e-81 305.1 193 78.8
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 1.4e-80 304.3 193 78.8
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.8e-80 303.9 323 57.0
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 3.0e-80 303.1 297 59.6
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 3.0e-80 303.1 281 65.5
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 4.5e-76 289.3 193 75.6
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 1.7e-75 287.3 259 64.1
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 3.8e-75 286.2 196 76.0
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 8.5e-75 285.0 161 87.6
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 8.5e-75 285.0 244 64.8
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 9.4e-74 281.6 239 67.8
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 7.9e-73 278.5 291 58.4
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.8e-72 277.3 292 57.5
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 6.7e-72 275.4 175 81.7
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 4.4e-71 272.7 158 86.7
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 9.7e-71 271.6 227 63.4
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 2.2e-70 270.4 220 65.0
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 3.1e-69 266.5 170 78.8
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 9.1e-69 265.0 161 83.2
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 1.6e-68 264.2 232 67.2
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.5e-68 263.1 277 58.8
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 3.8e-67 259.6 157 82.8
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 8.0e-65 251.9 206 66.5
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 4.0e-64 249.6 278 54.7
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 2.6e-63 246.9 140 88.6
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.1e-61 240.0 156 78.8
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 5.9e-60 235.7 229 59.0
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 1.3e-59 234.6 212 62.7
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.7e-59 234.2 154 77.9
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 7.2e-58 228.8 222 58.6
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 1.8e-53 214.2 192 68.2
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 9.1e-53 211.8 157 71.3
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 1.9e-50 204.1 145 69.7
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 1.8e-48 197.6 253 41.9
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 4.9e-46 189.5 324 40.7
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 1.8e-45 187.6 173 60.1
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 5.4e-45 186.0 128 77.3
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 1.6e-36 157.9 145 57.2
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 2.6e-31 140.6 185 41.1
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 3.7e-30 136.7 192 40.1
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.9e-29 134.4 89 77.5
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.2e-28 131.7 208 38.5
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 2.5e-26 124.0 139 54.0
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 3.0e-19 100.5 67 76.1
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 3.9e-19 100.1 63 79.4
Haze_03592 Corylus avellana HOM05D001765 ORTHO05D003527 1.5e-15 88.2 45 91.1
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 1.3e-14 85.1 64 71.9
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 6.4e-14 82.8 153 41.8
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.7e-11 74.7 64 57.8
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 7.3e-10 69.3 36 88.9
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 9.6e-10 68.9 50 72.0
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.6e-09 68.2 36 86.1
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 4.7e-09 66.6 39 79.5
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 8.9e-08 62.4 119 34.5
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 2.0e-07 61.2 46 65.2
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 4.4e-07 60.1 42 69.0
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 7.6e-07 59.3 109 39.4
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 2.9e-06 57.4 34 79.4


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