Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.1e-150 536.6 264 100.0
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.4e-142 509.6 266 96.6
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 3.9e-124 448.4 269 85.9
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 9.1e-113 410.6 268 79.5
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 3.3e-107 392.1 267 74.5
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 3.3e-107 392.1 290 73.4
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.4e-107 391.7 267 74.9
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 6.3e-106 387.9 264 74.2
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 8.2e-106 387.5 277 72.2
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 1.4e-105 386.7 264 75.4
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 2.4e-105 386.0 266 74.1
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 3.1e-105 385.6 266 74.1
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 3.1e-105 385.6 271 74.2
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 4.1e-105 385.2 268 73.9
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 3.8e-103 378.6 266 74.8
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 5.0e-103 378.3 270 71.1
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.5e-102 376.7 272 71.0
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 1.5e-102 376.7 266 73.3
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 2.5e-102 375.9 271 73.1
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.6e-101 373.2 271 70.5
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 2.1e-101 372.9 273 70.7
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 6.1e-101 371.3 271 69.4
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 8.0e-101 370.9 271 70.5
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 1.4e-100 370.2 264 73.9
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 3.0e-100 369.0 262 72.1
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 6.7e-100 367.9 265 72.1
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 8.8e-100 367.5 277 71.5
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 1.1e-99 367.1 213 84.5
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 1.5e-99 366.7 266 69.2
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 1.5e-99 366.7 267 71.5
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 2.0e-99 366.3 266 67.7
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.0e-99 366.3 269 72.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 2.6e-99 365.9 270 70.0
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 5.7e-99 364.8 225 80.0
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 7.5e-99 364.4 266 71.4
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 8.2e-98 360.9 273 70.0
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 2.4e-97 359.4 266 69.9
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 4.1e-97 358.6 267 69.7
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 4.1e-97 358.6 267 69.3
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.3e-97 358.2 212 81.6
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.3e-97 358.2 212 81.6
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 7.0e-97 357.8 263 68.8
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 7.0e-97 357.8 267 69.3
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 2.7e-96 355.9 274 69.7
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.3e-95 353.6 267 68.9
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 1.3e-95 353.6 266 69.5
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.3e-95 353.6 271 67.2
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.3e-95 353.6 271 67.2
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 1.3e-95 353.6 270 68.9
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 8.5e-95 350.9 260 68.1
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.1e-94 350.5 268 68.3
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 1.9e-94 349.7 201 83.1
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 3.2e-94 349.0 261 68.2
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 1.6e-93 346.7 263 67.3
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 2.7e-93 345.9 269 67.7
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 8.0e-93 344.4 233 71.2
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 5.2e-92 341.7 267 66.7
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.2e-91 340.5 212 77.8
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.0e-91 339.7 250 69.2
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 4.4e-91 338.6 259 67.6
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 5.7e-91 338.2 272 66.9
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 2.2e-90 336.3 266 66.9
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 6.3e-90 334.7 259 67.2
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 6.3e-90 334.7 261 66.3
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 1.8e-89 333.2 250 68.8
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 2.4e-89 332.8 249 69.1
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 5.4e-89 331.6 249 68.3
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 5.4e-89 331.6 265 65.7
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 2.9e-87 325.9 214 74.8
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.9e-86 323.2 214 76.2
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 6.1e-85 318.2 201 75.1
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 3.4e-83 312.4 250 65.6
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 4.4e-83 312.0 343 54.5
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 9.8e-83 310.8 263 63.9
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 4.9e-82 308.5 175 82.9
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.1e-81 305.4 223 68.6
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 5.4e-81 305.1 248 67.3
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 3.5e-80 302.4 198 72.2
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 6.6e-79 298.1 305 54.8
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 8.6e-79 297.7 176 79.0
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.5e-78 297.0 343 50.7
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 2.5e-78 296.2 263 60.5
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.6e-77 293.5 229 65.5
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 2.6e-75 286.2 271 59.4
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 1.2e-72 277.3 210 69.5
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 8.6e-71 271.2 261 58.6
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 2.0e-67 260.0 144 81.2
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 3.2e-65 252.7 203 64.5
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.2e-64 250.8 231 56.3
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 3.5e-64 249.2 226 58.8
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.7e-61 238.8 205 57.1
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 9.8e-59 231.1 207 62.3
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 1.3e-58 230.7 233 55.8
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 1.7e-58 230.3 159 67.9
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.4e-57 227.3 157 66.9
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 7.1e-57 224.9 190 56.8
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 1.2e-56 224.2 134 75.4
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 6.0e-56 221.9 173 67.6
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 3.0e-55 219.5 161 65.8
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.6e-53 212.6 158 69.6
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.5e-51 207.2 186 61.8
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.3e-50 204.1 200 56.5
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 3.7e-50 202.6 113 82.3
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 1.6e-48 197.2 111 82.9
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 1.6e-45 187.2 197 56.9
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 2.1e-45 186.8 108 81.5
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 4.9e-42 175.6 163 57.7
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.6e-40 170.6 107 75.7
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.6e-40 170.6 107 75.7
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 4.6e-40 169.1 189 47.1
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.3e-39 167.5 93 83.9
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.9e-39 166.0 106 74.5
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 5.1e-39 165.6 98 80.6
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 9.6e-38 161.4 81 90.1
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 6.2e-37 158.7 136 66.9
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 3.1e-36 156.4 82 87.8
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 5.4e-33 145.6 93 71.0
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 9.6e-30 134.8 160 52.5
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 5.1e-23 112.5 64 82.8
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 1.1e-20 104.8 179 36.9


User provided reference genes

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