Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 0.0e+00 1199.5 646 100.0
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 6.3e-216 754.6 651 65.3
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 5.5e-204 714.9 652 63.0
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 6.8e-178 628.2 654 56.1
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 7.0e-175 618.2 656 56.2
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.7e-165 587.0 572 60.7
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 8.0e-163 578.2 656 52.6
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 3.2e-159 566.2 656 51.8
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.7e-158 563.1 656 51.8
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 4.6e-158 562.4 675 53.5
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 6.0e-158 562.0 656 51.7
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 3.1e-154 549.7 662 50.3
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 5.8e-153 545.4 705 47.0
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.2e-152 543.5 705 47.8
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 2.9e-152 543.1 705 47.9
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 7.1e-151 538.5 654 51.1
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 3.3e-148 529.6 705 46.4
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.2e-147 527.7 650 51.8
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.2e-147 527.7 705 46.4
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 2.8e-147 526.6 705 48.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 9.9e-145 518.1 671 50.1
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 4.1e-143 512.7 704 45.6
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 9.2e-143 511.5 653 50.1
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.5e-140 504.2 635 49.8
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.7e-136 490.7 652 49.7
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 2.9e-136 490.0 706 45.3
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.4e-135 487.6 644 48.8
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 2.5e-132 476.9 706 44.5
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 2.1e-131 473.8 654 45.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 2.8e-131 473.4 702 46.2
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 5.8e-129 465.7 649 47.6
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 5.8e-129 465.7 711 44.0
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 5.4e-127 459.1 698 43.8
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 9.3e-127 458.4 713 43.6
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.2e-126 458.0 699 43.8
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.1e-126 457.2 668 45.8
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.3e-125 454.5 655 46.0
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.7e-125 454.1 655 48.7
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 2.3e-125 453.8 664 44.1
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.9e-125 453.0 659 46.4
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 9.6e-124 448.4 658 44.8
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 2.8e-123 446.8 650 44.2
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.4e-122 444.5 628 46.2
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 3.1e-122 443.4 591 49.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.6e-121 440.3 621 46.7
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 5.8e-121 439.1 639 43.5
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 7.1e-119 432.2 668 44.8
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.6e-118 431.0 653 45.2
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 4.3e-116 422.9 509 50.7
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 6.9e-114 415.6 659 43.9
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 2.9e-112 410.2 651 43.6
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.5e-111 406.0 634 44.0
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 7.1e-111 405.6 716 40.6
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 7.9e-110 402.1 704 41.1
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 5.7e-108 396.0 697 39.0
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 6.3e-107 392.5 641 41.8
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 3.1e-106 390.2 636 41.7
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 3.8e-104 383.3 633 42.7
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.0e-101 375.2 653 41.7
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 2.3e-101 374.0 646 40.1
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 4.3e-100 369.8 636 41.2
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.3e-99 365.9 594 43.1
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.2e-97 361.7 661 40.4
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 2.6e-97 360.5 641 39.5
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 2.2e-96 357.5 674 38.1
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.2e-94 351.7 516 43.4
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 3.6e-94 350.1 472 51.1
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.1e-90 338.6 554 41.5
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.4e-90 338.2 599 39.6
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 5.3e-90 336.3 685 38.1
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.2e-89 335.1 696 39.8
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 4.5e-89 333.2 637 37.5
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 2.9e-88 330.5 309 57.0
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.2e-86 325.1 636 39.0
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 7.9e-86 322.4 736 35.6
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.8e-85 321.2 644 36.0
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.8e-85 321.2 712 34.8
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 2.2e-83 314.3 653 36.9
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.7e-83 313.5 418 47.1
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 4.1e-82 310.1 659 36.7
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 5.3e-82 309.7 643 36.4
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 2.0e-81 307.8 478 47.1
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 1.0e-80 305.4 638 36.1
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 5.0e-80 303.1 375 53.9
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 6.7e-77 292.7 657 35.0
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.1e-76 292.0 671 34.1
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.3e-75 288.5 658 36.2
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.3e-75 288.5 658 36.2
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 3.5e-73 280.4 639 35.8
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 5.9e-73 279.6 646 35.9
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 7.7e-73 279.3 639 35.7
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 4.2e-71 273.5 453 41.1
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 9.4e-71 272.3 628 34.4
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 6.1e-70 269.6 634 33.8
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.5e-68 265.0 256 54.7
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 3.4e-68 263.8 649 32.7
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 9.8e-68 262.3 321 49.2
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 9.8e-68 262.3 641 34.3
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 6.3e-67 259.6 669 33.6
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 1.2e-62 245.4 667 32.8
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.6e-62 243.8 210 61.0
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 8.8e-61 239.2 639 30.5
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 2.6e-60 237.7 657 32.1
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 6.3e-59 233.0 264 52.3
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 1.2e-57 228.8 693 34.5
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 4.0e-53 213.8 428 40.2
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 8.9e-53 212.6 301 44.9
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 1.3e-51 208.8 304 48.0
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 7.8e-49 199.5 313 46.3
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 1.5e-47 195.3 506 35.4
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.3e-47 193.0 201 52.7
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 8.3e-43 179.5 130 67.7
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 7.0e-42 176.4 136 64.0
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 5.0e-40 170.2 303 42.9
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 1.1e-39 169.1 697 28.1
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.5e-39 168.7 218 51.8
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 9.2e-34 149.4 372 36.8
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 3.8e-27 127.5 192 44.3
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 1.4e-26 125.6 186 42.5
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 1.2e-22 112.5 137 54.0
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 6.2e-22 110.2 81 61.7
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.2e-22 110.2 216 38.9
QL04p005401 Quercus lobata HOM05D000011 ORTHO05D000157 8.1e-22 109.8 250 36.0
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 6.9e-21 106.7 97 53.6
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 3.2e-18 97.8 119 47.9
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 7.8e-17 93.2 123 51.2
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.1e-10 72.8 80 42.5


User provided reference genes

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