Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 0.0e+00 1312.7 678 100.0
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 0.0e+00 1083.2 665 86.6
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 1.1e-279 966.5 665 75.8
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 3.3e-276 954.9 689 73.9
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 1.2e-257 893.3 651 71.1
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 5.5e-255 884.4 652 69.6
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 5.1e-253 877.9 665 68.4
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 2.0e-249 865.9 655 68.1
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 2.0e-249 865.9 665 68.4
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 1.0e-248 863.6 656 68.3
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 2.2e-248 862.4 665 67.8
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 1.1e-247 860.1 660 68.0
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 1.5e-247 859.8 665 67.4
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.9e-247 859.4 656 68.9
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 3.0e-245 852.0 656 67.5
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 5.2e-245 851.3 655 66.1
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 8.8e-245 850.5 663 66.8
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 2.0e-244 849.4 661 67.5
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.1e-242 843.6 661 67.2
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 5.3e-242 841.3 661 67.2
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.6e-241 839.7 656 67.5
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 5.0e-240 834.7 656 67.1
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 1.0e-237 827.0 659 66.6
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 5.2e-237 824.7 661 64.1
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 3.5e-233 812.0 672 64.1
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 3.8e-232 808.5 654 64.2
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 2.8e-227 792.3 727 59.4
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 8.3e-227 790.8 665 62.9
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 8.3e-227 790.8 665 62.9
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 1.1e-226 790.4 665 62.9
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 5.4e-226 788.1 665 63.0
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 9.2e-226 787.3 655 63.1
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 1.0e-224 783.9 664 62.5
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 6.6e-224 781.2 648 62.5
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 4.3e-223 778.5 665 62.0
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 6.1e-222 774.6 667 59.8
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 1.4e-221 773.5 666 61.7
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 1.8e-221 773.1 650 62.2
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 2.6e-220 769.2 658 60.8
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 3.4e-220 768.8 671 61.3
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 3.4e-220 768.8 656 61.7
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 4.4e-220 768.5 665 61.5
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 1.8e-218 763.1 670 59.4
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 3.2e-218 762.3 659 60.7
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 4.1e-218 761.9 670 59.4
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.0e-217 759.6 669 61.1
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 1.0e-216 757.3 650 60.5
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 1.3e-216 756.9 665 59.5
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 3.9e-216 755.4 665 59.7
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 3.9e-216 755.4 666 60.7
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 8.6e-216 754.2 653 60.3
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 4.3e-215 751.9 653 61.7
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 7.3e-215 751.1 672 60.1
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.6e-214 750.0 666 59.0
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.8e-213 746.5 652 61.2
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 9.8e-212 740.7 647 58.9
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 1.6e-209 733.4 662 58.2
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 4.6e-209 731.9 651 59.3
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 4.6e-209 731.9 656 59.8
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 1.0e-208 730.7 651 58.5
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 3.6e-206 722.2 663 57.3
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 1.5e-204 716.8 666 57.4
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 3.4e-204 715.7 672 57.3
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 7.5e-204 714.5 666 56.9
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 7.5e-204 714.5 666 56.9
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 7.5e-204 714.5 666 57.1
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.6e-201 706.8 659 56.1
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.0e-201 704.9 655 56.0
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 3.0e-200 702.6 667 56.8
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.6e-198 696.8 734 52.0
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.8e-197 693.3 651 56.1
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 2.3e-192 676.4 675 55.0
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 1.2e-188 664.1 650 53.8
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 1.2e-177 627.5 650 53.8
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 1.3e-174 617.5 667 50.1
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.0e-172 610.1 452 69.9
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.8e-165 587.0 471 62.8
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 1.1e-159 567.8 440 66.4
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.9e-159 567.0 659 46.0
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 2.8e-158 563.1 385 74.8
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 3.2e-154 549.7 384 74.2
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 2.6e-140 503.4 437 60.6
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 1.0e-139 501.5 653 42.6
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 6.5e-139 498.8 667 42.1
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 3.9e-136 489.6 549 50.5
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 4.1e-133 479.6 375 67.5
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 3.2e-130 469.9 366 65.8
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 5.5e-130 469.2 565 47.6
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 5.9e-124 449.1 637 41.9
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 4.2e-122 443.0 671 38.0
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 1.3e-110 404.8 623 36.4
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.9e-106 391.0 718 34.7
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 4.7e-81 306.6 252 63.5
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 5.2e-80 303.1 212 71.2
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 8.1e-57 226.1 220 59.1
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 1.3e-43 182.2 649 26.7
MD10G1119100 Malus domestica HOM05D004110 ORTHO05D004810 2.3e-43 181.4 125 72.0
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.2e-39 169.1 100 82.0
CSS0008861 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 3.2e-37 161.0 149 56.4
Solyc11g039890.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.6e-36 158.7 178 47.2
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 9.1e-32 142.9 109 63.3
ClCG02G011550 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.6e-31 141.4 149 54.4
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 4.2e-29 134.0 121 57.0
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 2.1e-28 131.7 268 32.5
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla HOM05D004110 ORTHO05D004810 1.0e-27 129.4 93 68.8
CSS0014003 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 9.7e-26 122.9 94 64.9
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea HOM05D004110 ORTHO05D004810 3.7e-25 120.9 90 63.3
Gohir.A12G039250 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.4e-24 118.2 99 58.6
Zm00001eb026660 Zea mays HOM05D004110 ORTHO05D004810 8.5e-22 109.8 128 46.1
Os10g0154566 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 3.0e-19 101.3 127 41.7
MCO14G095 Micromonas commoda HOM05D004110 ORTHO05D004810 8.8e-19 99.8 594 23.4
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 9.7e-18 96.3 71 63.4
SHI05692 Sapria himalayana HOM05D004110 ORTHO05D004810 1.6e-15 89.0 80 55.0
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 2.0e-15 88.6 59 64.4
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 2.6e-15 88.2 51 70.6
AagrBONN_evm.TU.Sc2ySwM_344.4149 Anthoceros agrestis HOM05D004110 ORTHO05D004810 3.5e-15 87.8 147 34.0
Duzib248G0615 Durio zibethinus HOM05D004110 ORTHO05D004810 1.8e-11 75.5 224 27.7
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 4.0e-11 74.3 72 48.6
FAN24G1876 Fragaria x ananassa HOM05D000827 ORTHO05D001318 8.8e-11 73.2 66 54.5
Psat6g113120 Pisum sativum HOM05D020801 ORTHO05D004810 3.7e-09 67.8 52 61.5
arahy.Tifrunner.gnm1.ann1.9L03M9 Arachis hypogaea HOM05D004110 ORTHO05D004810 4.8e-09 67.4 43 65.1
AT4G10843 Arabidopsis thaliana HOM05D004110 ORTHO05D038727 7.7e-07 60.1 95 41.1
Psat5g096880 Pisum sativum HOM05D020801 ORTHO05D004810 1.3e-06 59.3 43 62.8
Psat5g096920 Pisum sativum HOM05D020801 ORTHO05D004810 1.3e-06 59.3 43 62.8
Psat7g001600 Pisum sativum HOM05D020801 ORTHO05D004810 1.3e-06 59.3 43 62.8


User provided reference genes

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