Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.3e-293 1012.3 486 100.0
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 4.0e-292 1007.3 486 99.4
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 2.2e-234 815.5 485 81.4
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 3.4e-214 748.4 477 75.1
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 4.0e-207 724.9 485 72.8
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 6.8e-207 724.2 473 74.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 6.8e-207 724.2 477 74.8
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.2e-206 723.4 477 74.4
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 1.7e-205 719.5 474 73.2
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 3.7e-205 718.4 476 72.9
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 2.4e-204 715.7 478 72.2
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 3.2e-204 715.3 476 72.1
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.0e-202 710.3 476 71.6
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.0e-202 710.3 476 72.1
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.7e-202 709.5 477 72.3
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 4.3e-201 704.9 476 70.8
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.1e-200 702.6 475 71.2
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 4.7e-200 701.4 472 70.6
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 4.4e-198 694.9 474 70.7
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.3e-197 693.3 474 71.1
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.7e-197 693.0 476 71.2
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.9e-197 692.2 474 70.9
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.0e-194 683.7 484 69.0
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.7e-194 682.9 522 66.5
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.9e-193 679.5 480 68.8
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 4.3e-193 678.3 480 69.0
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.1e-192 676.0 475 69.9
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 3.6e-192 675.2 476 68.5
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 3.1e-191 672.2 480 68.1
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 3.4e-190 668.7 474 69.6
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 4.2e-188 661.8 474 69.4
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.3e-186 656.8 482 67.4
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 3.0e-186 655.6 474 67.9
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 1.3e-184 650.2 500 65.8
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.6e-184 649.8 469 68.2
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.6e-184 649.8 436 74.5
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 3.6e-184 648.7 480 65.4
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.1e-183 647.1 506 63.4
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 1.2e-182 643.7 514 63.0
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 3.8e-181 638.6 473 66.8
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.8e-181 638.6 451 68.1
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 2.4e-180 636.0 490 64.5
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 3.2e-180 635.6 475 65.9
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.2e-180 635.2 451 68.3
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.2e-179 633.6 477 65.4
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.3e-178 630.2 473 66.2
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.8e-178 629.8 478 66.7
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 3.0e-178 629.0 478 65.3
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 8.7e-178 627.5 479 64.1
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.5e-177 626.7 479 63.9
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 1.5e-177 626.7 484 62.8
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 2.5e-177 625.9 479 64.1
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 4.3e-177 625.2 476 63.4
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 5.3e-175 618.2 454 67.4
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 6.9e-175 617.8 473 63.0
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.5e-174 616.7 477 63.1
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 2.6e-174 615.9 463 66.3
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 9.9e-174 614.0 470 66.4
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 9.9e-174 614.0 454 66.5
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 6.4e-173 611.3 473 63.2
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 7.1e-172 607.8 476 62.0
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 3.5e-171 605.5 475 63.4
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 4.6e-171 605.1 470 64.7
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.0e-170 604.0 484 62.8
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 3.9e-170 602.1 469 62.5
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 5.1e-170 601.7 473 62.6
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 5.6e-169 598.2 477 62.1
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 9.6e-169 597.4 480 62.5
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 9.6e-169 597.4 474 62.0
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 2.8e-168 595.9 476 61.6
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.8e-168 595.9 484 61.8
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 4.8e-168 595.1 476 61.1
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.1e-167 594.0 480 60.2
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 2.4e-167 592.8 478 62.3
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.4e-167 592.8 476 60.9
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 4.0e-167 592.0 510 59.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 5.8e-166 588.2 477 61.8
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.2e-165 586.3 452 63.1
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 4.6e-163 578.6 488 61.3
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 2.3e-162 576.2 512 58.6
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 5.1e-162 575.1 493 58.8
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 5.1e-162 575.1 486 59.7
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 6.7e-162 574.7 487 60.4
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 6.7e-162 574.7 461 63.3
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.1e-159 567.4 475 59.6
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 9.0e-159 564.3 474 59.9
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 9.0e-159 564.3 474 59.9
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 2.6e-158 562.8 475 59.8
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 2.6e-158 562.8 486 59.3
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 3.6e-155 552.4 475 58.5
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 2.3e-154 549.7 476 58.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 2.8e-152 542.7 462 58.2
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.2e-149 533.1 479 56.8
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 2.0e-145 520.0 331 78.5
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 2.4e-143 513.1 501 53.9
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 2.5e-140 503.1 496 53.4
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 2.5e-140 503.1 496 53.4
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 7.9e-139 498.0 478 55.2
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.4e-135 487.3 317 74.8
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.5e-132 477.2 485 54.4
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 2.9e-125 453.0 542 45.9
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.7e-123 446.4 473 52.2
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 3.1e-119 433.0 470 46.8
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 2.5e-116 423.3 526 44.5
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.4e-114 417.5 394 54.8
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 2.3e-109 400.2 281 69.8
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 5.0e-109 399.1 353 57.5
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 3.1e-98 363.2 477 44.7
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 2.6e-97 360.1 470 43.6
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.7e-85 320.9 291 57.4
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 3.3e-76 290.0 317 52.4
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.1e-63 248.4 145 77.9
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 9.3e-63 245.4 332 39.8
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.8e-61 241.1 391 36.1
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 2.6e-49 200.7 827 24.1
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 3.1e-42 177.2 334 33.2
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 9.4e-39 165.6 152 56.6
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.5e-36 157.5 111 67.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.9e-29 133.7 77 77.9
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 4.1e-26 123.6 160 49.4
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.7e-20 103.2 115 50.4
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 1.9e-15 88.2 123 43.1
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 4.7e-06 57.0 31 77.4


User provided reference genes

Program Settings