Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00862 Corylus avellana HOM05D001092 ORTHO05D000923 5.8e-144 514.2 261 100.0
Haze_00818 Corylus avellana HOM05D001092 ORTHO05D000923 1.3e-74 283.9 206 75.2
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 5.0e-47 192.2 208 55.8
QL06p013529 Quercus lobata HOM05D001092 ORTHO05D000923 6.1e-45 185.3 212 57.1
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 2.9e-39 166.4 218 49.5
CANSAT78G0281 Cannabis sativa HOM05D001092 ORTHO05D000923 8.6e-39 164.9 218 47.2
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 1.1e-38 164.5 226 48.7
Dinv29544 Davidia involucrata HOM05D001092 ORTHO05D000923 1.5e-38 164.1 226 50.0
TAR362G0616 Trochodendron aralioides HOM05D001092 ORTHO05D000923 1.9e-38 163.7 210 50.5
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 2.5e-38 163.3 208 48.1
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 3.3e-38 162.9 201 49.8
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 1.6e-37 160.6 206 51.0
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 2.8e-37 159.8 218 49.5
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 3.6e-37 159.5 224 46.9
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 3.0e-36 156.4 218 46.8
COL.COLO4_34530 Corchorus olitorius HOM05D001092 ORTHO05D000923 4.0e-36 156.0 218 49.5
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 6.8e-36 155.2 218 45.9
Gohir.D10G182400 Gossypium hirsutum HOM05D001092 ORTHO05D000923 8.9e-36 154.8 206 48.1
Gorai.011G204400 Gossypium raimondii HOM05D001092 ORTHO05D000923 8.9e-36 154.8 206 48.1
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 8.9e-36 154.8 220 46.8
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 1.2e-35 154.5 206 48.5
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 1.2e-35 154.5 217 47.5
CSS0029198 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.5e-35 154.1 220 45.9
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 2.0e-35 153.7 206 49.0
PSO210G3521 Papaver somniferum HOM05D001092 ORTHO05D000923 4.4e-35 152.5 206 49.0
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 5.7e-35 152.1 224 46.0
Nn2g14501 Nelumbo nucifera HOM05D001092 ORTHO05D000923 5.7e-35 152.1 208 45.7
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 5.7e-35 152.1 217 47.0
Gohir.A10G175901 Gossypium hirsutum HOM05D001092 ORTHO05D000923 7.5e-35 151.8 211 47.4
MD16G1145300 Malus domestica HOM05D001092 ORTHO05D000923 9.8e-35 151.4 220 45.0
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.3e-34 151.0 205 47.8
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 1.1e-33 147.9 211 46.9
Sed0011983 Sechium edule HOM05D001092 ORTHO05D000923 1.1e-33 147.9 224 45.1
ClCG05G006770 Citrullus lanatus HOM05D001092 ORTHO05D000923 5.4e-33 145.6 220 45.0
Atru.chr4.3074 Acer truncatum HOM05D001092 ORTHO05D000923 7.0e-33 145.2 228 45.6
DCAR_023379 Daucus carota HOM05D001092 ORTHO05D000923 7.0e-33 145.2 224 42.4
Gohir.A02G056800 Gossypium hirsutum HOM05D001092 ORTHO05D000923 7.0e-33 145.2 221 45.2
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 1.6e-32 144.1 206 46.6
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 2.7e-32 143.3 262 40.1
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 2.7e-32 143.3 218 43.6
AT1G48090 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 3.5e-32 142.9 206 45.1
Aqoxy4G01582 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 5.9e-32 142.1 215 45.1
Aqoxy2G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 1.0e-31 141.4 221 45.2
MELO3C006741.2 Cucumis melo HOM05D001092 ORTHO05D000923 1.3e-31 141.0 220 44.1
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 1.3e-31 141.0 219 43.4
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.3e-31 141.0 218 43.1
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 1.7e-31 140.6 206 44.7
CsaV3_3G015400 Cucumis sativus L. HOM05D001092 ORTHO05D000923 1.7e-31 140.6 219 44.7
Psat0s45g0120 Pisum sativum HOM05D001092 ORTHO05D000923 1.7e-31 140.6 220 43.2
Thhalv10011170m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 2.3e-31 140.2 219 42.9
AL1G54650 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 3.0e-31 139.8 206 44.7
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 3.0e-31 139.8 208 44.2
DCAR_026963 Daucus carota HOM05D001092 ORTHO05D000923 3.9e-31 139.4 221 42.1
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 3.9e-31 139.4 206 43.7
Actinidia18491 Actinidia chinensis HOM05D001092 ORTHO05D000923 5.0e-31 139.0 215 45.6
Carub.0001s3719 Capsella rubella HOM05D001092 ORTHO05D000923 1.5e-30 137.5 206 43.7
Medtr4g123110 Medicago truncatula HOM05D001092 ORTHO05D000923 1.9e-30 137.1 217 42.9
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 1.9e-30 137.1 220 43.2
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 4.3e-30 136.0 222 41.9
BcaB04g17465 Brassica carinata HOM05D001092 ORTHO05D000923 5.6e-30 135.6 190 46.3
Peaxi162Scf00290g00313 Petunia axillaris HOM05D001092 ORTHO05D000923 5.6e-30 135.6 221 41.2
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 9.5e-30 134.8 209 45.0
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 9.5e-30 134.8 213 44.6
vmacro07984 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 2.1e-29 133.7 196 46.4
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 8.0e-29 131.7 191 44.0
CAN.G824.5 Capsicum annuum HOM05D001092 ORTHO05D000923 8.0e-29 131.7 218 41.3
BcaC07g37172 Brassica carinata HOM05D001092 ORTHO05D000923 1.0e-28 131.3 190 46.8
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 1.0e-28 131.3 190 46.8
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 1.0e-28 131.3 190 46.8
BolC8t47372H Brassica oleracea HOM05D001092 ORTHO05D000923 1.8e-28 130.6 190 46.3
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 4.0e-28 129.4 190 46.3
BcaB07g33792 Brassica carinata HOM05D001092 ORTHO05D000923 8.9e-28 128.3 190 45.8
A06p04720 Brassica napus HOM05D001092 ORTHO05D000923 3.4e-27 126.3 206 43.2
MSTRG.3839 Avicennia marina HOM05D001092 ORTHO05D000923 7.5e-27 125.2 218 39.4
Migut.G00017 Erythranthe guttata HOM05D001092 ORTHO05D000923 8.3e-26 121.7 221 38.9
HanXRQChr10g0319871 Helianthus annuus HOM05D001092 ORTHO05D000923 8.3e-26 121.7 219 40.6
C06p02470 Brassica napus HOM05D001092 ORTHO05D000923 1.1e-25 121.3 205 42.4
BolC6t35374H Brassica oleracea HOM05D001092 ORTHO05D000923 1.1e-25 121.3 205 42.4
BraA06t23675Z Brassica rapa HOM05D001092 ORTHO05D000923 1.1e-25 121.3 212 42.5
Nitab4.5_0007366g0030 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.4e-25 120.9 206 39.8
Sopen09g004100 Solanum pennellii HOM05D001092 ORTHO05D000923 1.4e-25 120.9 218 38.5
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 2.7e-24 116.7 219 38.8
EL10Ac6g15714 Beta vulgaris HOM05D001092 ORTHO05D000923 2.3e-23 113.6 205 39.0
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 3.0e-23 113.2 199 39.7
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 6.6e-23 112.1 210 38.1
SGA_v2.0_scaffold157G37366 Striga asiatica HOM05D001092 ORTHO05D000923 1.1e-22 111.3 222 35.6
AUR62038227 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.5e-22 110.9 195 41.0
Cpa.g.sc146.58 Carica papaya HOM05D001092 ORTHO05D000923 3.3e-22 109.8 170 45.3
HPP92_008101 Vanilla planifolia HOM05D001092 ORTHO05D000923 9.5e-22 108.2 201 41.8
AUR62003914 Chenopodium quinoa HOM05D001092 ORTHO05D000923 4.7e-21 105.9 195 39.5
Lalb_Chr13g0298811 Lupinus albus HOM05D001092 ORTHO05D000923 8.1e-21 105.1 136 47.8
Lj6C698G8 Lonicera japonica HOM05D001092 ORTHO05D000923 5.2e-20 102.4 181 39.8
SalBow8G3461 Salvia bowleyana HOM05D001092 ORTHO05D000923 3.4e-19 99.8 219 37.9
Ah.03g145680 Amaranthus hybridus HOM05D001092 ORTHO05D000923 7.5e-19 98.6 200 36.0
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 9.8e-19 98.2 206 40.8
SHI00078 Sapria himalayana HOM05D001092 ORTHO05D000923 7.8e-16 88.6 124 45.2
SEGI_19754 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 1.3e-15 87.8 196 34.2
BcaNung06642 Brassica carinata HOM05D001092 ORTHO05D000923 6.6e-15 85.5 155 42.6
CSS0038348 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.7e-10 70.9 204 33.8
RcHm_v2.0_Chr4g0407781 Rosa chinensis HOM05D001092 ORTHO05D000923 4.1e-09 66.2 49 67.3
RcHm_v2.0_Chr4g0407721 Rosa chinensis HOM05D001092 ORTHO05D000923 2.3e-07 60.5 92 51.1
ATR1019G001 Amborella trichopoda HOM05D001092 ORTHO05D000923 1.1e-06 58.2 61 49.2
ATR1145G101 Amborella trichopoda HOM05D001092 ORTHO05D000923 2.5e-06 57.0 41 68.3
Aqoxy2G01196 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 2.5e-06 57.0 58 53.4
Ca_21396_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 4.3e-06 56.2 49 63.3
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 5.6e-06 55.8 49 57.1
AagrBONN_evm.TU.Sc2ySwM_362.1817 Anthoceros agrestis HOM05D001092 ORTHO05D000923 9.6e-06 55.1 211 29.4


User provided reference genes

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