Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00532 Corylus avellana HOM05D001689 ORTHO05D001643 2.9e-92 342.0 193 100.0
Haze_00530 Corylus avellana HOM05D001689 ORTHO05D001643 4.1e-62 241.9 192 71.4
QL06p003730 Quercus lobata HOM05D001689 ORTHO05D001643 2.6e-40 169.5 112 81.2
CiPaw.01G161900 Carya illinoinensis HOM05D001689 ORTHO05D001643 1.3e-36 157.1 111 74.8
CiPaw.02G093800 Carya illinoinensis HOM05D001689 ORTHO05D001643 1.6e-34 150.2 109 74.3
Thecc.04G225300 Theobroma cacao HOM05D001689 ORTHO05D001643 2.9e-28 129.4 113 61.9
Actinidia23500 Actinidia chinensis HOM05D001689 ORTHO05D001643 1.9e-27 126.7 115 59.1
Potri.008G149300 Populus trichocarpa HOM05D001689 ORTHO05D001643 2.5e-27 126.3 113 64.6
Sabra08G0113500 Salix brachista HOM05D001689 ORTHO05D001643 1.6e-26 123.6 113 63.7
FAN22G0600 Fragaria x ananassa HOM05D001689 ORTHO05D001643 5.2e-25 118.6 98 67.3
Prupe.1G153500 Prunus persica HOM05D001689 ORTHO05D001643 6.8e-25 118.2 104 63.5
FAN17G0703 Fragaria x ananassa HOM05D001689 ORTHO05D001643 8.9e-25 117.9 98 65.3
RcHm_v2.0_Chr4g0417351 Rosa chinensis HOM05D001689 ORTHO05D001643 1.5e-24 117.1 92 68.5
Potri.010G092300 Populus trichocarpa HOM05D001689 ORTHO05D001643 2.0e-24 116.7 112 60.7
FvH4_4g14860 Fragaria vesca HOM05D001689 ORTHO05D001643 3.4e-24 115.9 98 65.3
FAN12G0826 Fragaria x ananassa HOM05D001689 ORTHO05D001643 3.4e-24 115.9 98 65.3
Duzib052G0937 Durio zibethinus HOM05D001689 ORTHO05D001643 1.3e-23 114.0 113 57.5
Sabra10G0051100 Salix brachista HOM05D001689 ORTHO05D001643 1.3e-23 114.0 113 59.3
GSVIVG01017909001 Vitis vinifera HOM05D001689 ORTHO05D001643 1.3e-23 114.0 96 67.7
Gorai.006G236500 Gossypium raimondii HOM05D001689 ORTHO05D001643 2.2e-23 113.2 113 59.3
CSS0037296 Camellia sinensis var. sinensis HOM05D001689 ORTHO05D001643 2.9e-23 112.8 112 57.1
Manes.15G025300 Manihot esculenta HOM05D001689 ORTHO05D001643 2.9e-23 112.8 112 58.0
MD13G1185900 Malus domestica HOM05D001689 ORTHO05D001643 3.7e-23 112.5 112 58.9
Dinv38410 Davidia involucrata HOM05D001689 ORTHO05D001643 6.4e-23 111.7 103 63.1
Duzib212G0388 Durio zibethinus HOM05D001689 ORTHO05D001643 6.4e-23 111.7 113 58.4
Gohir.D09G216100 Gossypium hirsutum HOM05D001689 ORTHO05D001643 6.4e-23 111.7 113 59.3
Manes.03G182300 Manihot esculenta HOM05D001689 ORTHO05D001643 6.4e-23 111.7 104 59.6
MSTRG.4006 Avicennia marina HOM05D001689 ORTHO05D001643 8.3e-23 111.3 95 60.0
TAR365G0722 Trochodendron aralioides HOM05D001689 ORTHO05D001643 2.4e-22 109.8 102 58.8
Lj3C742T8 Lonicera japonica HOM05D001689 ORTHO05D001643 3.2e-22 109.4 123 55.3
CANSAT78G1910 Cannabis sativa HOM05D001689 ORTHO05D001643 1.2e-21 107.5 116 53.4
Atru.chr4.2531 Acer truncatum HOM05D001689 ORTHO05D001643 3.5e-21 105.9 111 55.0
Nitab4.5_0000630g0090 Nicotiana tabacum HOM05D001689 ORTHO05D001643 3.5e-21 105.9 111 57.7
Aqoxy2G03306 Aquilegia oxysepala HOM05D001689 ORTHO05D001643 1.3e-20 104.0 116 53.4
Ciclev10005221m.g Citrus clementina HOM05D001689 ORTHO05D001643 5.0e-20 102.1 111 52.3
Peaxi162Scf01336g00021 Petunia axillaris HOM05D001689 ORTHO05D001643 5.0e-20 102.1 111 55.9
Sed0020814 Sechium edule HOM05D001689 ORTHO05D001643 1.5e-19 100.5 115 51.3
THA.LOC104822229 Tarenaya hassleriana HOM05D001689 ORTHO05D001643 1.5e-19 100.5 84 61.9
DCAR_027174 Daucus carota HOM05D001689 ORTHO05D000195 2.5e-19 99.8 102 56.9
Nitab4.5_0020213g0010 Nicotiana tabacum HOM05D001689 ORTHO05D001643 3.3e-19 99.4 112 54.5
PGSC0003DMG400009025 Solanum tuberosum HOM05D001689 ORTHO05D001643 5.6e-19 98.6 118 51.7
MD16G1186700 Malus domestica HOM05D001689 ORTHO05D001643 9.5e-19 97.8 92 60.9
Rhsim04G0203700 Rhododendron simsii HOM05D001689 ORTHO05D001643 1.2e-18 97.4 117 50.4
Sc25g0004480 Simmondsia chinensis HOM05D001689 ORTHO05D001643 1.6e-18 97.1 91 61.5
Solyc01g079810.4 Solanum lycopersicum HOM05D001689 ORTHO05D001643 4.7e-18 95.5 74 68.9
Sopen01g031570 Solanum pennellii HOM05D001689 ORTHO05D001643 6.2e-18 95.1 81 63.0
Sp7g12080 Schrenkiella parvula HOM05D001689 ORTHO05D001643 8.1e-18 94.7 85 64.7
Nn4g26232 Nelumbo nucifera HOM05D001689 ORTHO05D001643 1.1e-17 94.4 117 47.9
vmacro15319 Vaccinium macrocarpon HOM05D001689 ORTHO05D001643 1.1e-17 94.4 113 49.6
Aa31LG9G3160 Aethionema arabicum HOM05D001689 ORTHO05D001643 4.0e-17 92.4 70 72.9
COL.COLO4_05825 Corchorus olitorius HOM05D001689 ORTHO05D001643 4.0e-17 92.4 55 83.6
CsaV3_6G015100 Cucumis sativus L. HOM05D001689 ORTHO05D001643 4.0e-17 92.4 114 50.0
Cpa.g.sc147.21 Carica papaya HOM05D001689 ORTHO05D001643 6.8e-17 91.7 112 52.7
Medtr2g022680 Medicago truncatula HOM05D001689 ORTHO05D001643 6.8e-17 91.7 110 57.3
EL10As3g23301 Beta vulgaris HOM05D001689 ORTHO05D001643 8.9e-17 91.3 89 60.7
FAN07G1034 Fragaria x ananassa HOM05D001689 ORTHO05D001643 8.9e-17 91.3 55 85.5
MELO3C021411.2 Cucumis melo HOM05D001689 ORTHO05D001643 1.5e-16 90.5 114 50.0
AUR62038075 Chenopodium quinoa HOM05D001689 ORTHO05D001643 2.0e-16 90.1 83 61.4
Lj6g0007281 Lotus japonicus HOM05D001689 ORTHO05D001643 2.0e-16 90.1 118 50.8
Carub.0007s2817 Capsella rubella HOM05D001689 ORTHO05D001643 2.6e-16 89.7 83 63.9
Hma1.2p1_0995F.1_g245770 Hydrangea macrophylla HOM05D001689 ORTHO05D001643 2.6e-16 89.7 111 49.5
AUR62038176 Chenopodium quinoa HOM05D001689 ORTHO05D001643 4.4e-16 89.0 89 57.3
Ca_00629_v3 Cicer arietinum L. HOM05D001689 ORTHO05D001643 4.4e-16 89.0 109 52.3
arahy.Tifrunner.gnm1.ann1.04I11T Arachis hypogaea HOM05D001689 ORTHO05D001643 7.5e-16 88.2 125 51.2
Hund12174 Selenicereus undatus HOM05D001689 ORTHO05D001643 7.5e-16 88.2 91 60.4
Ah.04g154340 Amaranthus hybridus HOM05D001689 ORTHO05D001643 9.8e-16 87.8 91 58.2
ClCG06G005890 Citrullus lanatus HOM05D001689 ORTHO05D001643 9.8e-16 87.8 111 48.6
Cc03_g03310 Coffea canephora HOM05D001689 ORTHO05D001643 1.7e-15 87.0 54 83.3
Lalb_Chr18g0056201 Lupinus albus HOM05D001689 ORTHO05D001643 1.7e-15 87.0 119 50.4
arahy.Tifrunner.gnm1.ann1.J8BQFV Arachis hypogaea HOM05D001689 ORTHO05D001643 2.9e-15 86.3 127 45.7
BraA08t34384Z Brassica rapa HOM05D001689 ORTHO05D001643 2.9e-15 86.3 81 60.5
Glyma.13G206800 Glycine max HOM05D001689 ORTHO05D001643 2.9e-15 86.3 93 59.1
PSO170G2170 Papaver somniferum HOM05D001689 ORTHO05D001643 2.9e-15 86.3 114 48.2
Rhsim02G0021100 Rhododendron simsii HOM05D001689 ORTHO05D001643 2.9e-15 86.3 110 47.3
VMungo0540G1491 Vigna mungo HOM05D001689 ORTHO05D001643 4.9e-15 85.5 102 51.0
BcaC01g00208 Brassica carinata HOM05D001689 ORTHO05D001643 6.4e-15 85.1 81 59.3
BcaNung05577 Brassica carinata HOM05D001689 ORTHO05D001643 6.4e-15 85.1 81 60.5
A08p24290 Brassica napus HOM05D001689 ORTHO05D001643 6.4e-15 85.1 81 59.3
C03p76920 Brassica napus HOM05D001689 ORTHO05D001643 6.4e-15 85.1 81 59.3
BolC3t19947H Brassica oleracea HOM05D001689 ORTHO05D001643 6.4e-15 85.1 81 59.3
Lalb_Chr15g0087421 Lupinus albus HOM05D001689 ORTHO05D001643 6.4e-15 85.1 118 50.0
Oeu031629.1 Olea europaea HOM05D001689 ORTHO05D001643 8.3e-15 84.7 84 54.8
arahy.Tifrunner.gnm1.ann1.6XT93H Arachis hypogaea HOM05D001689 ORTHO05D001643 1.1e-14 84.3 125 49.6
Thhalv10025539m.g Eutrema salsugineum HOM05D001689 ORTHO05D001643 1.1e-14 84.3 83 57.8
Glyma.07G258300 Glycine max HOM05D001689 ORTHO05D001643 1.1e-14 84.3 102 50.0
Phvul.006G151600 Phaseolus vulgaris HOM05D001689 ORTHO05D001643 1.1e-14 84.3 111 48.6
MBI19_g31356_MAGBIO Magnolia biondii HOM05D001689 ORTHO05D001643 1.4e-14 84.0 108 51.9
AL7G42140 Arabidopsis lyrata HOM05D001689 ORTHO05D001643 1.9e-14 83.6 54 81.5
PSO302G0023 Papaver somniferum HOM05D001689 ORTHO05D001643 2.4e-14 83.2 96 53.1
AT4G14220 Arabidopsis thaliana HOM05D001689 ORTHO05D001643 3.2e-14 82.8 54 79.6
arahy.Tifrunner.gnm1.ann1.H3BHHJ Arachis hypogaea HOM05D001689 ORTHO05D001643 5.4e-14 82.0 94 53.2
Glyma.15G105800 Glycine max HOM05D001689 ORTHO05D001643 5.4e-14 82.0 94 56.4
RcHm_v2.0_Chr4g0417381 Rosa chinensis HOM05D001689 ORTHO05D001643 7.1e-14 81.6 74 60.8
TPR.G7645 Trifolium pratense HOM05D001689 ORTHO05D001643 9.2e-14 81.3 109 51.4
TWI09G1649 Tripterygium wilfordii HOM05D001689 ORTHO05D001643 9.2e-14 81.3 113 50.4
Eucgr.B01111 Eucalyptus grandis HOM05D001689 ORTHO05D001643 1.2e-13 80.9 114 49.1
CARHR220300 Cardamine hirsuta HOM05D001689 ORTHO05D001643 1.6e-13 80.5 54 75.9
Psat1g182920 Pisum sativum HOM05D001689 ORTHO05D001643 1.6e-13 80.5 52 78.8
PGR142G3446 Punica granatum HOM05D001689 ORTHO05D001643 1.3e-12 77.4 111 45.0
SEGI_09281 Sequoiadendron giganteum HOM05D001689 ORTHO05D001643 1.7e-12 77.0 84 53.6
Glyma.17G015800 Glycine max HOM05D001689 ORTHO05D001643 5.1e-12 75.5 100 50.0
ECA234G1087 Erigeron canadensis HOM05D001689 ORTHO05D001643 9.5e-11 71.2 83 51.8
ECA234G4071 Erigeron canadensis HOM05D001689 ORTHO05D001643 1.2e-10 70.9 83 54.2
TAR111G0001 Trochodendron aralioides HOM05D001689 ORTHO05D001643 6.4e-07 58.5 88 42.0
CDE11G0133 Ceratophyllum demersum HOM05D001689 ORTHO05D001643 1.9e-06 57.0 100 41.0
Lsat_1_v5_gn_5_74000 Lactuca sativa HOM05D001689 ORTHO05D001643 3.2e-06 56.2 46 63.0
Gohir.A05G077200 Gossypium hirsutum HOM05D001689 ORTHO05D001643 5.4e-06 55.5 72 44.4
COL.COLO4_25365 Corchorus olitorius HOM05D001689 ORTHO05D001643 7.1e-06 55.1 83 41.0
arahy.Tifrunner.gnm1.ann1.MJ9ZNK Arachis hypogaea HOM05D001689 ORTHO05D001643 9.2e-06 54.7 52 53.8
arahy.Tifrunner.gnm1.ann1.UW9078 Arachis hypogaea HOM05D001689 ORTHO05D001643 9.2e-06 54.7 52 53.8


User provided reference genes

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