Gene: Solyc01g079810.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g079810.4
  • Transcript Identifier Solyc01g079810.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 71525132-71530293 : positive

Gene Family Information

  • ID HOM05D001689
  • #Genes/#Species 383/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g079810.4.1
  • uniprot A0A3Q7EHX3
  • gene_id Solyc01g079810

Descriptions

  • Description E3 ubiquitin-protein ligase RHF1A (AHRD V3.3 *** A0A1J3FVF9_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT4G14220
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT4G14220
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT4G14220
GO:0010498
ISO
PLAZA Integrative Orthologyproteasomal protein catabolic process AT4G14220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
IBA
GOA Databaseubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024766 Zinc finger, RING-H2-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
13.7.4.4 Cell cycle organisation.germline development.embryogenesis.E3 ubiquitin protein ligase (RHF)