Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00171 Corylus avellana HOM05D003236 ORTHO05D003620 1.0e-29 132.9 72 100.0
Haze_00167 Corylus avellana HOM05D003236 ORTHO05D003620 2.5e-28 128.3 68 100.0
Cfa015952 Carpinus fangiana HOM05D003236 ORTHO05D003620 6.0e-27 123.6 68 97.1
CiPaw.01G161600 Carya illinoinensis HOM05D003236 ORTHO05D003620 3.7e-16 87.8 119 49.6
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 6.9e-15 83.6 119 46.2
DCAR_027180 Daucus carota HOM05D003236 ORTHO05D003620 1.2e-14 82.8 79 58.2
Potri.010G191800 Populus trichocarpa HOM05D003236 ORTHO05D003620 1.5e-14 82.4 119 45.4
Sabra10G0147500 Salix brachista HOM05D003236 ORTHO05D003620 3.4e-14 81.3 119 44.5
FvH4_4g14820 Fragaria vesca HOM05D003236 ORTHO05D003620 5.9e-14 80.5 119 44.5
FAN12G2674 Fragaria x ananassa HOM05D003236 ORTHO05D003620 5.9e-14 80.5 119 44.5
CiPaw.02G093600 Carya illinoinensis HOM05D003236 ORTHO05D003620 3.8e-13 77.8 119 45.4
Migut.N00158 Erythranthe guttata HOM05D003236 ORTHO05D003620 5.0e-13 77.4 119 43.7
FAN04G3165 Fragaria x ananassa HOM05D003236 ORTHO05D003620 6.5e-13 77.0 119 44.5
FAN08G2949 Fragaria x ananassa HOM05D003236 ORTHO05D003620 6.5e-13 77.0 119 44.5
Manes.08G075500 Manihot esculenta HOM05D003236 ORTHO05D003620 8.5e-13 76.6 119 46.2
RcHm_v2.0_Chr4g0417501 Rosa chinensis HOM05D003236 ORTHO05D003620 1.1e-12 76.3 119 43.7
RcHm_v2.0_Chr6g0272881 Rosa chinensis HOM05D003236 ORTHO05D003620 1.4e-12 75.9 119 43.7
TWI53G0183 Tripterygium wilfordii HOM05D003236 ORTHO05D003620 1.9e-12 75.5 119 42.9
TAR362G0648 Trochodendron aralioides HOM05D003236 ORTHO05D003620 1.9e-12 75.5 119 44.5
Rhsim04G0203500 Rhododendron simsii HOM05D003236 ORTHO05D003620 2.5e-12 75.1 119 43.7
Sabra16G0185700 Salix brachista HOM05D003236 ORTHO05D003620 2.5e-12 75.1 119 42.0
RcHm_v2.0_Chr6g0272861 Rosa chinensis HOM05D003236 ORTHO05D003620 5.5e-12 73.9 119 42.9
Peaxi162Scf00069g01432 Petunia axillaris HOM05D003236 ORTHO05D003620 7.2e-12 73.6 119 42.9
RcHm_v2.0_Chr6g0272831 Rosa chinensis HOM05D003236 ORTHO05D003620 7.2e-12 73.6 98 49.0
RcHm_v2.0_Chr6g0272851 Rosa chinensis HOM05D003236 ORTHO05D003620 7.2e-12 73.6 95 48.4
SalBow2G2662 Salvia bowleyana HOM05D003236 ORTHO05D003620 9.4e-12 73.2 119 41.2
CSS0018012 Camellia sinensis var. sinensis HOM05D003236 ORTHO05D003620 1.2e-11 72.8 119 43.7
COL.COLO4_08743 Corchorus olitorius HOM05D003236 ORTHO05D003620 1.2e-11 72.8 119 42.0
Sc13g0004130 Simmondsia chinensis HOM05D003236 ORTHO05D003620 1.2e-11 72.8 119 40.3
Lsat_1_v5_gn_4_32481 Lactuca sativa HOM05D003236 ORTHO05D003620 1.6e-11 72.4 81 55.6
Rhsim02G0180400 Rhododendron simsii HOM05D003236 ORTHO05D003620 1.6e-11 72.4 118 42.4
Ciclev10005413m.g Citrus clementina HOM05D003236 ORTHO05D003620 2.7e-11 71.6 119 42.9
Hund19506 Selenicereus undatus HOM05D003236 ORTHO05D003620 2.7e-11 71.6 119 39.5
Thecc.04G030700 Theobroma cacao HOM05D003236 ORTHO05D003620 3.6e-11 71.2 119 39.5
Dinv38409 Davidia involucrata HOM05D003236 ORTHO05D003620 4.6e-11 70.9 119 42.9
MSTRG.10005 Avicennia marina HOM05D003236 ORTHO05D003620 6.1e-11 70.5 119 38.7
CAN.G851.10 Capsicum annuum HOM05D003236 ORTHO05D003620 6.1e-11 70.5 119 41.2
Migut.G00306 Erythranthe guttata HOM05D003236 ORTHO05D003620 7.9e-11 70.1 119 40.3
SGA_v2.0_scaffold166G38366 Striga asiatica HOM05D003236 ORTHO05D003620 1.0e-10 69.7 119 39.5
PGR142G1056 Punica granatum HOM05D003236 ORTHO05D003620 1.4e-10 69.3 119 42.0
Actinidia23501 Actinidia chinensis HOM05D003236 ORTHO05D003620 1.8e-10 68.9 119 41.2
Duzib147G0392 Durio zibethinus HOM05D003236 ORTHO05D003620 1.8e-10 68.9 119 39.5
Hma1.2p1_0995F.1_g245780 Hydrangea macrophylla HOM05D003236 ORTHO05D003620 1.8e-10 68.9 119 42.0
Nn4g26225 Nelumbo nucifera HOM05D003236 ORTHO05D003620 2.3e-10 68.6 119 42.0
Sopen06g019440 Solanum pennellii HOM05D003236 ORTHO05D003620 2.3e-10 68.6 119 40.3
THA.LOC104818806 Tarenaya hassleriana HOM05D003236 ORTHO05D003620 2.3e-10 68.6 119 40.3
CANSAT56G0357 Cannabis sativa HOM05D003236 ORTHO05D003620 3.0e-10 68.2 119 41.2
Sopen01g016440 Solanum pennellii HOM05D003236 ORTHO05D003620 3.0e-10 68.2 119 40.3
Atru.chr4.2535 Acer truncatum HOM05D003236 ORTHO05D003620 3.9e-10 67.8 119 41.2
Duzib187G1207 Durio zibethinus HOM05D003236 ORTHO05D003620 3.9e-10 67.8 119 39.5
TAR633G2542 Trochodendron aralioides HOM05D003236 ORTHO05D003620 3.9e-10 67.8 119 41.2
MBI17_g13566_MAGBIO Magnolia biondii HOM05D003236 ORTHO05D003620 5.1e-10 67.4 119 39.5
Solyc06g054330.3 Solanum lycopersicum HOM05D003236 ORTHO05D003620 5.1e-10 67.4 119 39.5
SGA_v2.0_scaffold39G15309 Striga asiatica HOM05D003236 ORTHO05D003620 5.1e-10 67.4 119 39.5
Eucgr.B01114 Eucalyptus grandis HOM05D003236 ORTHO05D003620 6.7e-10 67.0 119 42.0
Gohir.A05G340100 Gossypium hirsutum HOM05D003236 ORTHO05D003620 6.7e-10 67.0 119 37.8
Ah.10g034980 Amaranthus hybridus HOM05D003236 ORTHO05D003620 8.8e-10 66.6 119 36.1
Nitab4.5_0000321g0010 Nicotiana tabacum HOM05D003236 ORTHO05D003620 8.8e-10 66.6 119 41.2
Nitab4.5_0006333g0030 Nicotiana tabacum HOM05D003236 ORTHO05D003620 8.8e-10 66.6 119 41.2
MD13G1185700 Malus domestica HOM05D003236 ORTHO05D003620 1.5e-09 65.9 119 41.2
Nitab4.5_0008223g0010 Nicotiana tabacum HOM05D003236 ORTHO05D003620 1.5e-09 65.9 119 41.2
Sed0017985 Sechium edule HOM05D003236 ORTHO05D003620 1.5e-09 65.9 119 41.2
Eucgr.B01113 Eucalyptus grandis HOM05D003236 ORTHO05D003620 2.0e-09 65.5 107 42.1
Gohir.D04G078600 Gossypium hirsutum HOM05D003236 ORTHO05D003620 2.0e-09 65.5 119 37.0
Gorai.012G088500 Gossypium raimondii HOM05D003236 ORTHO05D003620 2.0e-09 65.5 119 37.0
Prupe.6G171900 Prunus persica HOM05D003236 ORTHO05D003620 2.5e-09 65.1 118 41.5
AUR62042438 Chenopodium quinoa HOM05D003236 ORTHO05D003620 3.3e-09 64.7 119 36.1
Eucgr.B01115 Eucalyptus grandis HOM05D003236 ORTHO05D003620 3.3e-09 64.7 119 40.3
PSO017G3704 Papaver somniferum HOM05D003236 ORTHO05D003620 3.3e-09 64.7 119 39.5
PSO478G0559 Papaver somniferum HOM05D003236 ORTHO05D003620 3.3e-09 64.7 119 39.5
Thhalv10021124m.g Eutrema salsugineum HOM05D003236 ORTHO05D003620 4.3e-09 64.3 118 37.3
THA.LOC104822305 Tarenaya hassleriana HOM05D003236 ORTHO05D003620 4.3e-09 64.3 119 39.5
Zm00001eb188220 Zea mays HOM05D003236 ORTHO05D003620 4.3e-09 64.3 120 38.3
Cpa.g.sc125.28 Carica papaya HOM05D003236 ORTHO05D003620 5.7e-09 63.9 119 38.7
Lsat_1_v5_gn_1_50180 Lactuca sativa HOM05D003236 ORTHO05D003620 5.7e-09 63.9 118 39.8
RcHm_v2.0_Chr6g0272751 Rosa chinensis HOM05D003236 ORTHO05D003620 5.7e-09 63.9 119 38.7
EL10Ac2g04006 Beta vulgaris HOM05D003236 ORTHO05D003620 7.4e-09 63.5 119 35.3
Carub.0003s0550 Capsella rubella HOM05D003236 ORTHO05D003620 9.7e-09 63.2 118 36.4
ClCG05G011190 Citrullus lanatus HOM05D003236 ORTHO05D003620 9.7e-09 63.2 118 39.8
AT3G06060 Arabidopsis thaliana HOM05D003236 ORTHO05D003620 1.3e-08 62.8 118 36.4
CARHR080570 Cardamine hirsuta HOM05D003236 ORTHO05D003620 1.3e-08 62.8 118 36.4
ECA248G2845 Erigeron canadensis HOM05D003236 ORTHO05D003620 1.3e-08 62.8 119 39.5
HanXRQChr01g0028881 Helianthus annuus HOM05D003236 ORTHO05D003620 1.3e-08 62.8 119 39.5
MBI19_g44204_MAGBIO Magnolia biondii HOM05D003236 ORTHO05D003620 1.3e-08 62.8 119 38.7
Cc03_g03280 Coffea canephora HOM05D003236 ORTHO05D003620 2.2e-08 62.0 113 40.7
AUR62009269 Chenopodium quinoa HOM05D003236 ORTHO05D003620 2.8e-08 61.6 119 34.5
Glyma.15G105400 Glycine max HOM05D003236 ORTHO05D003620 2.8e-08 61.6 118 39.0
Zm00001eb251870 Zea mays HOM05D003236 ORTHO05D003620 2.8e-08 61.6 120 37.5
Aa31LG5G16550 Aethionema arabicum HOM05D003236 ORTHO05D003620 3.7e-08 61.2 118 36.4
AL6G30650 Arabidopsis lyrata HOM05D003236 ORTHO05D003620 3.7e-08 61.2 116 38.8
Glyma.13G207200 Glycine max HOM05D003236 ORTHO05D003620 3.7e-08 61.2 118 39.0
Prupe.6G197600 Prunus persica HOM05D003236 ORTHO05D003620 3.7e-08 61.2 118 39.8
AT5G19200 Arabidopsis thaliana HOM05D003236 ORTHO05D003620 6.3e-08 60.5 116 38.8
Haze_00533 Corylus avellana HOM05D003236 ORTHO05D003620 6.3e-08 60.5 40 75.0
Lj6g0023183 Lotus japonicus HOM05D003236 ORTHO05D003620 6.3e-08 60.5 117 38.5
Sp3g05010 Schrenkiella parvula HOM05D003236 ORTHO05D003620 6.3e-08 60.5 118 35.6
Aqoxy2G03298 Aquilegia oxysepala HOM05D003236 ORTHO05D003620 8.2e-08 60.1 39 69.2
MELO3C006553.2 Cucumis melo HOM05D003236 ORTHO05D003620 8.2e-08 60.1 118 39.0
CsaV3_3G013580 Cucumis sativus L. HOM05D003236 ORTHO05D003620 8.2e-08 60.1 118 39.0
C05p61190 Brassica napus HOM05D003236 ORTHO05D003620 1.1e-07 59.7 118 35.6
Os02g0701900 Oryza sativa ssp. japonica HOM05D003236 ORTHO05D003620 1.1e-07 59.7 120 36.7
Sp6g25180 Schrenkiella parvula HOM05D003236 ORTHO05D008795 1.1e-07 59.7 119 37.8
BcaC05g30061 Brassica carinata HOM05D003236 ORTHO05D003620 1.4e-07 59.3 118 35.6
A05p41940 Brassica napus HOM05D003236 ORTHO05D003620 1.4e-07 59.3 118 35.6
BraA05t22916Z Brassica rapa HOM05D003236 ORTHO05D003620 1.4e-07 59.3 118 35.6
Hund19505 Selenicereus undatus HOM05D003236 ORTHO05D003620 1.8e-07 58.9 119 35.3
Lalb_Chr15g0087401 Lupinus albus HOM05D003236 ORTHO05D003620 2.4e-07 58.5 118 36.4
arahy.Tifrunner.gnm1.ann1.4929ND Arachis hypogaea HOM05D003236 ORTHO05D003620 3.1e-07 58.2 116 35.3
arahy.Tifrunner.gnm1.ann1.IC6NPA Arachis hypogaea HOM05D000043 ORTHO05D001371 3.1e-07 58.2 116 35.3
Lalb_Chr18g0056161 Lupinus albus HOM05D003236 ORTHO05D003620 4.1e-07 57.8 117 36.8
Phvul.006G152000 Phaseolus vulgaris HOM05D003236 ORTHO05D003620 4.1e-07 57.8 118 35.6
Medtr2g022600 Medicago truncatula HOM05D003236 ORTHO05D003620 5.3e-07 57.4 117 37.6
Carub.0006s1753 Capsella rubella HOM05D003236 ORTHO05D003620 9.1e-07 56.6 119 37.0
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 2.0e-06 55.5 115 35.7
HPP92_015138 Vanilla planifolia HOM05D003236 ORTHO05D003620 2.0e-06 55.5 109 34.9
VMungo0540G1138 Vigna mungo HOM05D003236 ORTHO05D003620 2.0e-06 55.5 118 35.6
ECA248G1348 Erigeron canadensis HOM05D000874 ORTHO05D001049 2.6e-06 55.1 113 38.1
Ca_00632_v3 Cicer arietinum L. HOM05D003236 ORTHO05D003620 4.5e-06 54.3 118 36.4
Sed0022772 Sechium edule HOM05D003236 ORTHO05D003620 4.5e-06 54.3 118 37.3
TPR.G7640 Trifolium pratense HOM05D003236 ORTHO05D003620 4.5e-06 54.3 117 36.8
Gohir.A05G230300 Gossypium hirsutum HOM05D003236 ORTHO05D003620 5.9e-06 53.9 39 69.2
Gohir.D05G232700 Gossypium hirsutum HOM05D003236 ORTHO05D003620 5.9e-06 53.9 39 69.2
Gorai.N027600 Gossypium raimondii HOM05D003236 ORTHO05D003620 5.9e-06 53.9 39 69.2
Lj3P750T44 Lonicera japonica HOM05D003236 ORTHO05D003620 7.7e-06 53.5 52 53.8
PSO832G4100 Papaver somniferum HOM05D003236 ORTHO05D003620 7.7e-06 53.5 120 34.2


User provided reference genes

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