Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00157 Corylus avellana HOM05D008085 ORTHO05D010173 3.5e-302 1040.8 519 100.0
Cfa016390 Carpinus fangiana HOM05D008085 ORTHO05D010173 6.1e-246 854.0 506 86.2
Haze_00163 Corylus avellana HOM05D008085 ORTHO05D010173 7.0e-218 760.8 463 84.2
QL09p010254 Quercus lobata HOM05D008085 ORTHO05D010173 4.1e-194 681.8 510 69.0
Haze_00158 Corylus avellana HOM05D008085 ORTHO05D010173 1.1e-181 640.6 532 67.7
Dinv35318 Davidia involucrata HOM05D008085 ORTHO05D010173 3.0e-168 595.9 522 61.3
TWI23G0877 Tripterygium wilfordii HOM05D008085 ORTHO05D010173 9.6e-167 590.9 493 62.7
Dinv05478 Davidia involucrata HOM05D008085 ORTHO05D010173 2.1e-166 589.7 514 61.5
CSS0016250 Camellia sinensis var. sinensis HOM05D008085 ORTHO05D010173 5.3e-165 585.1 516 61.0
CSS0005334 Camellia sinensis var. sinensis HOM05D008085 ORTHO05D010173 2.2e-163 579.7 516 60.7
Duzib205G2065 Durio zibethinus HOM05D008085 ORTHO05D010173 2.2e-163 579.7 514 58.6
Potri.012G002500 Populus trichocarpa HOM05D008085 ORTHO05D010173 3.8e-163 578.9 493 60.6
TAR375G0766 Trochodendron aralioides HOM05D008085 ORTHO05D010173 3.5e-161 572.4 519 58.8
Manes.14G007380 Manihot esculenta HOM05D008085 ORTHO05D010173 3.9e-160 568.9 514 59.1
Thecc.03G194500 Theobroma cacao HOM05D008085 ORTHO05D010173 4.3e-159 565.5 514 58.4
Actinidia08634 Actinidia chinensis HOM05D008085 ORTHO05D010173 1.3e-158 563.9 497 60.6
Ciclev10004407m.g Citrus clementina HOM05D008085 ORTHO05D010173 2.0e-156 556.6 482 62.0
Cpa.g.sc3.61 Carica papaya HOM05D008085 ORTHO05D010173 1.0e-155 554.3 520 56.9
Nn3g19023 Nelumbo nucifera HOM05D008085 ORTHO05D010173 6.5e-155 551.6 488 58.8
Gohir.A08G096300 Gossypium hirsutum HOM05D008085 ORTHO05D010173 9.3e-154 547.7 519 56.3
Gorai.004G115200 Gossypium raimondii HOM05D008085 ORTHO05D010173 1.8e-152 543.5 519 56.1
DCAR_014539 Daucus carota HOM05D008085 ORTHO05D010173 9.4e-146 521.2 556 52.7
HanXRQChr14g0462941 Helianthus annuus HOM05D008085 ORTHO05D010173 3.4e-140 502.7 495 54.1
Oeu036104.3 Olea europaea HOM05D008085 ORTHO05D010173 2.9e-139 499.6 508 52.8
PGSC0003DMG400019605 Solanum tuberosum HOM05D008085 ORTHO05D010173 2.5e-138 496.5 462 56.3
Nitab4.5_0000015g0330 Nicotiana tabacum HOM05D008085 ORTHO05D010173 9.4e-138 494.6 524 52.1
PSO384G3985 Papaver somniferum HOM05D008085 ORTHO05D010173 1.2e-137 494.2 561 49.2
Lsat_1_v5_gn_2_135900 Lactuca sativa HOM05D008085 ORTHO05D010173 1.6e-137 493.8 525 52.0
ECA238G3695 Erigeron canadensis HOM05D008085 ORTHO05D010173 4.7e-137 492.3 509 52.1
Nitab4.5_0001524g0030 Nicotiana tabacum HOM05D008085 ORTHO05D010173 7.9e-137 491.5 467 55.2
Solyc06g051930.3 Solanum lycopersicum HOM05D008085 ORTHO05D010173 3.0e-136 489.6 462 55.2
CAN.G589.4 Capsicum annuum HOM05D008085 ORTHO05D010173 5.1e-136 488.8 457 55.6
Gohir.D08G107600 Gossypium hirsutum HOM05D008085 ORTHO05D010173 6.7e-136 488.4 519 52.6
Migut.F00232 Erythranthe guttata HOM05D008085 ORTHO05D010173 1.5e-135 487.3 513 52.4
Sopen06g017970 Solanum pennellii HOM05D008085 ORTHO05D010173 3.3e-135 486.1 462 54.8
MBI06_g05050_MAGBIO Magnolia biondii HOM05D008085 ORTHO05D010173 1.3e-134 484.2 470 54.5
PGR142G3951 Punica granatum HOM05D008085 ORTHO05D010173 1.1e-133 481.1 507 51.5
SalBow4G3049 Salvia bowleyana HOM05D008085 ORTHO05D010173 1.8e-133 480.3 515 50.5
SalBow4G2621 Salvia bowleyana HOM05D008085 ORTHO05D010173 7.0e-133 478.4 515 50.3
THA.LOC104818158 Tarenaya hassleriana HOM05D008085 ORTHO05D010173 7.2e-130 468.4 505 51.3
Aqoxy5G04211 Aquilegia oxysepala HOM05D008085 ORTHO05D010173 9.4e-130 468.0 548 49.3
MSTRG.8674 Avicennia marina HOM05D008085 ORTHO05D010173 9.4e-130 468.0 500 50.0
Peaxi162Scf00618g00417 Petunia axillaris HOM05D008085 ORTHO05D010173 1.4e-128 464.2 430 55.8
SGA_v2.0_scaffold44G16781 Striga asiatica HOM05D001322 ORTHO05D010173 1.1e-127 461.1 499 48.9
ATR0721G049 Amborella trichopoda HOM05D008085 ORTHO05D010173 3.3e-127 459.5 489 51.5
AT3G49160 Arabidopsis thaliana HOM05D008085 ORTHO05D010173 3.7e-126 456.1 549 48.1
Sp5g12920 Schrenkiella parvula HOM05D008085 ORTHO05D010173 6.3e-126 455.3 474 53.0
CDE02G1263 Ceratophyllum demersum HOM05D008085 ORTHO05D010173 1.4e-125 454.1 460 51.1
AL5G28870 Arabidopsis lyrata HOM05D008085 ORTHO05D010173 4.1e-125 452.6 537 48.0
Aa31LG4G17600 Aethionema arabicum HOM05D002525 ORTHO05D010173 2.0e-124 450.3 452 52.9
Thhalv10010144m.g Eutrema salsugineum HOM05D008085 ORTHO05D010173 5.9e-124 448.7 535 47.5
BcaB05g22962 Brassica carinata HOM05D008085 ORTHO05D010173 1.3e-123 447.6 475 51.4
Carub.0005s1539 Capsella rubella HOM05D008085 ORTHO05D010173 2.2e-123 446.8 477 50.3
A01p24940 Brassica napus HOM05D008085 ORTHO05D010173 1.8e-120 437.2 507 48.7
COL.COLO4_38240 Corchorus olitorius HOM05D008085 ORTHO05D010173 1.8e-120 437.2 299 70.6
CARHR158030 Cardamine hirsuta HOM05D008085 ORTHO05D010173 4.0e-120 436.0 461 51.6
BcaC09g49925 Brassica carinata HOM05D008085 ORTHO05D010173 7.5e-119 431.8 532 46.8
C01p31160 Brassica napus HOM05D008085 ORTHO05D010173 7.5e-119 431.8 532 46.8
BraA01t02405Z Brassica rapa HOM05D008085 ORTHO05D010173 1.7e-118 430.6 505 47.7
BolC1t03050H Brassica oleracea HOM05D008085 ORTHO05D010173 2.2e-118 430.3 532 46.6
Lj3P907T42 Lonicera japonica HOM05D008085 ORTHO05D010173 1.6e-116 424.1 297 68.4
SEGI_04870 Sequoiadendron giganteum HOM05D008085 ORTHO05D010173 1.7e-107 394.0 476 45.6
HPP92_026771 Vanilla planifolia HOM05D008085 ORTHO05D010173 1.6e-105 387.5 460 48.7
GSVIVG01028701001 Vitis vinifera HOM05D008085 ORTHO05D010173 3.7e-102 376.3 497 46.7
Pp3c1_20930 Physcomitrium patens HOM05D008085 ORTHO05D010173 4.2e-69 266.5 477 35.2
Pp3c14_1520 Physcomitrium patens HOM05D008085 ORTHO05D010173 2.3e-67 260.8 495 34.5
Atru.chr13.232 Acer truncatum HOM05D008085 ORTHO05D010173 1.1e-50 205.3 121 78.5
CBR_g44458 Chara braunii HOM05D008085 ORTHO05D010173 3.7e-41 173.7 400 29.8
Atru.chr13.230 Acer truncatum HOM05D008085 ORTHO05D010173 4.6e-36 156.8 166 57.2
Cfa016387 Carpinus fangiana HOM05D008085 ORTHO05D010173 2.6e-26 124.4 73 83.6
Atru.chr13.231 Acer truncatum HOM05D008085 ORTHO05D010173 1.0e-22 112.5 72 72.2


User provided reference genes

Program Settings