Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 1.9e-113 412.5 207 100.0
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 3.9e-111 404.8 207 98.6
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 1.1e-108 396.7 207 96.6
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 2.0e-107 392.5 207 96.1
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 2.0e-107 392.5 207 96.1
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 2.0e-107 392.5 207 96.1
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 2.0e-107 392.5 207 96.1
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 9.3e-105 383.6 207 94.7
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 2.7e-104 382.1 207 94.2
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.8e-103 379.4 207 92.8
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 2.8e-101 372.1 207 91.8
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 92.3
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 92.3
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 92.3
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 92.3
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 92.3
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 92.3
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 1.5e-99 366.3 207 91.3
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 2.6e-99 365.5 207 91.3
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 1.3e-98 363.2 207 91.8
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 1.7e-98 362.8 207 89.9
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 1.7e-98 362.8 207 89.9
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 6.5e-98 360.9 207 89.4
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.1e-97 360.1 207 88.9
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 2.1e-96 355.9 195 92.3
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 4.6e-96 354.8 207 87.4
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 7.9e-96 354.0 207 88.4
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.5e-94 349.7 207 89.9
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 5.7e-94 347.8 194 90.7
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 2.5e-86 322.4 177 92.7
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 7.7e-83 310.8 207 81.2
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.6e-80 303.1 207 79.2
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 4.4e-78 295.0 207 74.9
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.2e-77 290.8 177 87.0
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 5.3e-76 288.1 161 90.1
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 4.2e-73 278.5 160 88.8
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 2.1e-72 276.2 160 88.1
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 5.3e-68 261.5 146 91.8
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 2.7e-64 249.2 152 82.9
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.6e-59 233.4 146 84.9
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 9.4e-57 224.2 158 78.5
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 8.3e-53 211.1 132 81.1
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 7.0e-52 208.0 114 93.9
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 3.8e-50 202.2 100 95.0
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 6.3e-45 184.9 99 96.0
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 1.0e-42 177.6 99 93.9
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 1.1e-41 174.1 96 88.5
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 1.2e-38 164.1 105 82.9
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 7.5e-38 161.4 99 86.9
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.3e-37 160.6 123 69.1
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.2e-36 156.0 91 89.0
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 3.4e-30 136.0 87 85.1
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 4.1e-28 129.0 146 53.4
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 4.7e-24 115.5 66 87.9
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 1.7e-21 107.1 59 93.2
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 2.1e-19 100.1 67 85.1
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 1.9e-17 93.6 58 75.9
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 2.4e-12 76.6 65 67.7
Sc04g0005550 Simmondsia chinensis HOM05D008280 ORTHO05D051001 2.6e-06 56.6 40 70.0
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 9.9e-06 54.7 108 40.7


User provided reference genes

Program Settings