Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 9.5e-174 613.6 339 100.0
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 8.2e-117 424.5 334 75.4
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 3.4e-115 419.1 334 74.3
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.1e-105 387.5 302 70.5
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.7e-104 382.9 335 67.8
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.7e-104 382.9 297 70.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.4e-103 380.6 294 70.7
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.8e-103 380.2 303 69.6
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 2.3e-103 379.8 340 67.6
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 3.0e-103 379.4 293 70.6
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.0e-103 379.4 289 71.6
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 3.3e-102 375.9 294 70.1
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 4.4e-102 375.6 291 67.4
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.2e-101 373.2 290 66.2
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.1e-100 370.9 292 70.5
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 3.1e-100 369.4 289 70.2
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 7.0e-100 368.2 291 65.6
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 3.5e-99 365.9 291 65.3
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 5.9e-99 365.2 302 67.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 7.7e-99 364.8 298 68.5
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 1.3e-98 364.0 298 68.5
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.3e-98 364.0 286 67.5
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 5.0e-98 362.1 299 68.9
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 5.0e-98 362.1 302 66.9
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 5.0e-98 362.1 261 70.1
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 5.0e-98 362.1 300 64.7
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 8.5e-98 361.3 297 66.0
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.9e-97 360.1 262 74.4
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 3.2e-97 359.4 268 68.3
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 9.4e-97 357.8 298 67.4
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 2.7e-96 356.3 325 66.2
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 6.1e-96 355.1 298 65.4
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 3.0e-95 352.8 301 65.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 3.0e-95 352.8 318 67.0
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 6.7e-95 351.7 325 65.8
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.7e-95 351.7 300 64.7
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.1e-94 350.9 318 67.0
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 3.3e-94 349.4 297 64.6
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 7.5e-94 348.2 306 65.4
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 9.7e-94 347.8 297 64.0
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.3e-93 347.4 297 60.3
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.2e-93 346.7 292 66.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.8e-93 346.3 264 71.6
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 3.7e-93 345.9 276 72.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.8e-93 345.5 300 66.0
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 6.3e-93 345.1 266 71.8
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 3.1e-92 342.8 298 65.8
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 3.1e-92 342.8 295 64.7
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 4.1e-92 342.4 244 75.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 7.0e-92 341.7 304 63.5
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.2e-91 340.9 288 66.7
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.2e-91 340.9 261 72.0
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.2e-91 340.9 293 65.5
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.6e-91 340.5 302 61.6
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.6e-91 340.5 267 65.2
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 4.5e-91 339.0 294 64.6
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 5.9e-91 338.6 244 75.4
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 7.7e-91 338.2 242 75.6
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 7.7e-91 338.2 324 61.7
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.0e-90 337.8 339 59.3
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 3.2e-89 332.8 224 80.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 3.2e-89 332.8 292 64.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 7.2e-89 331.6 241 73.4
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 9.4e-89 331.3 230 78.7
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.2e-88 330.9 300 64.3
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 6.1e-88 328.6 242 72.7
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.4e-86 322.4 301 58.8
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 4.8e-85 318.9 283 61.1
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 8.3e-85 318.2 242 78.5
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 2.4e-84 316.6 265 67.2
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 9.1e-84 314.7 258 67.1
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.9e-83 312.0 271 65.7
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 1.5e-81 307.4 321 59.2
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 4.2e-81 305.8 244 72.1
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.0e-78 297.0 244 67.6
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.1e-73 281.2 249 60.6
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 5.6e-73 278.9 236 64.8
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 2.1e-72 276.9 210 72.4
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 4.0e-63 246.1 205 68.3
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 7.5e-62 241.9 301 47.5
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.7e-61 240.7 156 77.6
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 9.2e-60 235.0 197 69.0
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 6.0e-59 232.3 174 70.1
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 2.8e-56 223.4 243 55.1
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 2.8e-56 223.4 242 55.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 2.6e-54 216.9 170 72.4
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 7.1e-52 208.8 212 61.8
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.3e-49 199.5 138 73.2
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 7.6e-38 162.2 250 35.2
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 3.8e-37 159.8 231 45.0
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 2.4e-36 157.1 109 77.1
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.0e-30 137.5 116 71.6
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 7.1e-28 129.0 139 46.0
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.1e-25 121.7 74 91.9


User provided reference genes

Program Settings