Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0560571 Helianthus annuus HOM05D000070 ORTHO05D007395 2.4e-56 221.9 108 100.0
HanXRQChr11g0350101 Helianthus annuus HOM05D000070 ORTHO05D007395 4.6e-31 137.9 81 86.4
ECA236G0808 Erigeron canadensis HOM05D000070 ORTHO05D007395 2.5e-29 132.1 81 82.7
Lsat_1_v5_gn_8_54380 Lactuca sativa HOM05D000070 ORTHO05D007395 6.3e-28 127.5 81 79.0
HanXRQChr16g0518511 Helianthus annuus HOM05D000070 ORTHO05D007395 2.0e-26 122.5 80 78.8
AUR62014846 Chenopodium quinoa HOM05D000070 ORTHO05D007395 7.7e-26 120.6 81 71.6
QL12p030669 Quercus lobata HOM05D000070 ORTHO05D007395 7.7e-26 120.6 81 74.1
QL12p030852 Quercus lobata HOM05D000070 ORTHO05D007395 7.7e-26 120.6 81 74.1
Dinv33019 Davidia involucrata HOM05D000070 ORTHO05D007395 1.0e-25 120.2 81 72.8
Lalb_Chr18g0047281 Lupinus albus HOM05D000070 ORTHO05D007395 1.7e-25 119.4 81 74.1
Phvul.001G204400 Phaseolus vulgaris HOM05D000070 ORTHO05D007395 1.7e-25 119.4 81 72.8
Eucgr.H01193 Eucalyptus grandis HOM05D000070 ORTHO05D007395 2.9e-25 118.6 81 74.1
PGR119G1212 Punica granatum HOM05D000070 ORTHO05D007395 3.8e-25 118.2 81 74.1
Hund05399 Selenicereus undatus HOM05D000070 ORTHO05D007395 3.8e-25 118.2 81 71.6
CiPaw.03G194600 Carya illinoinensis HOM05D000070 ORTHO05D007395 5.0e-25 117.9 81 72.8
Oeu008494.1 Olea europaea HOM05D000070 ORTHO05D007395 5.0e-25 117.9 81 70.4
Glyma.19G208300 Glycine max HOM05D000070 ORTHO05D007395 6.5e-25 117.5 81 72.8
VMungo1383G0236 Vigna mungo HOM05D000070 ORTHO05D007395 6.5e-25 117.5 81 71.6
Manes.05G066100 Manihot esculenta HOM05D000070 ORTHO05D007395 8.5e-25 117.1 81 70.4
Thecc.01G293600 Theobroma cacao HOM05D000070 ORTHO05D007395 8.5e-25 117.1 80 70.0
Haze_04855 Corylus avellana HOM05D000070 ORTHO05D007395 1.1e-24 116.7 81 71.6
FvH4_2g25060 Fragaria vesca HOM05D000070 ORTHO05D007395 1.1e-24 116.7 81 71.6
FAN27G1086 Fragaria x ananassa HOM05D000070 ORTHO05D007395 1.1e-24 116.7 81 71.6
Gohir.D08G083000 Gossypium hirsutum HOM05D000070 ORTHO05D007395 1.1e-24 116.7 78 71.8
Gorai.004G086800 Gossypium raimondii HOM05D000070 ORTHO05D007395 1.1e-24 116.7 78 71.8
MSTRG.21609 Avicennia marina HOM05D000070 ORTHO05D007395 1.4e-24 116.3 80 71.2
Cfa005990 Carpinus fangiana HOM05D000070 ORTHO05D007395 1.4e-24 116.3 81 71.6
Lj1g0003563 Lotus japonicus HOM05D000070 ORTHO05D007395 1.4e-24 116.3 81 72.8
EL10Ac8g20415 Beta vulgaris HOM05D000070 ORTHO05D007395 1.9e-24 115.9 81 69.1
Cc01_g20480 Coffea canephora HOM05D000070 ORTHO05D007395 2.5e-24 115.5 81 71.6
Gohir.A08G073600 Gossypium hirsutum HOM05D000070 ORTHO05D007395 2.5e-24 115.5 75 73.3
MD03G1281900 Malus domestica HOM05D000070 ORTHO05D007395 3.2e-24 115.2 84 66.7
arahy.Tifrunner.gnm1.ann1.Z88H36 Arachis hypogaea HOM05D000070 ORTHO05D007395 4.2e-24 114.8 81 71.6
Ciclev10018729m.g Citrus clementina HOM05D000070 ORTHO05D007395 4.2e-24 114.8 82 72.0
Lj1C36T4 Lonicera japonica HOM05D000070 ORTHO05D007395 5.5e-24 114.4 78 73.1
AUR62017042 Chenopodium quinoa HOM05D000070 ORTHO05D007395 7.2e-24 114.0 81 69.1
PGSC0003DMG400005347 Solanum tuberosum HOM05D000070 ORTHO05D007395 7.2e-24 114.0 81 69.1
TPR.G16081 Trifolium pratense HOM05D000070 ORTHO05D007395 7.2e-24 114.0 85 69.4
FAN24G0631 Fragaria x ananassa HOM05D000070 ORTHO05D007395 9.4e-24 113.6 81 70.4
Solyc06g008730.3 Solanum lycopersicum HOM05D000070 ORTHO05D007395 9.4e-24 113.6 81 69.1
Sopen06g003520 Solanum pennellii HOM05D000070 ORTHO05D007395 9.4e-24 113.6 81 69.1
Actinidia21068 Actinidia chinensis HOM05D000070 ORTHO05D007395 1.2e-23 113.2 81 71.6
Duzib133G0238 Durio zibethinus HOM05D000070 ORTHO05D007395 1.6e-23 112.8 80 68.8
GSVIVG01010963001 Vitis vinifera HOM05D000070 ORTHO05D007395 1.6e-23 112.8 81 69.1
arahy.Tifrunner.gnm1.ann1.GG1WAR Arachis hypogaea HOM05D000070 ORTHO05D007395 2.1e-23 112.5 81 70.4
ClCG09G006220 Citrullus lanatus HOM05D000070 ORTHO05D007395 2.1e-23 112.5 80 68.8
MD11G1301700 Malus domestica HOM05D000070 ORTHO05D007395 2.1e-23 112.5 81 66.7
Prupe.8G255300 Prunus persica HOM05D000070 ORTHO05D007395 2.1e-23 112.5 81 69.1
Potri.014G133000 Populus trichocarpa HOM05D000070 ORTHO05D007395 2.7e-23 112.1 81 69.1
vmacro14983 Vaccinium macrocarpon HOM05D000070 ORTHO05D007395 2.7e-23 112.1 82 72.0
DCAR_002804 Daucus carota HOM05D000070 ORTHO05D007395 3.6e-23 111.7 78 73.1
Medtr7g089290 Medicago truncatula HOM05D000070 ORTHO05D007395 4.7e-23 111.3 85 67.1
Atru.chr5.1235 Acer truncatum HOM05D000070 ORTHO05D007395 6.1e-23 110.9 86 67.4
Cpa.g.sc441.4 Carica papaya HOM05D000070 ORTHO05D007395 6.1e-23 110.9 77 72.7
Rhsim01G0282100 Rhododendron simsii HOM05D000070 ORTHO05D007395 7.9e-23 110.5 82 72.0
Sc05g0004360 Simmondsia chinensis HOM05D000070 ORTHO05D007395 7.9e-23 110.5 80 68.8
RcHm_v2.0_Chr6g0293081 Rosa chinensis HOM05D000070 ORTHO05D007395 1.0e-22 110.2 81 67.9
Migut.D00179 Erythranthe guttata HOM05D000070 ORTHO05D007395 1.4e-22 109.8 81 71.6
Peaxi162Scf00572g00111 Petunia axillaris HOM05D000070 ORTHO05D007395 1.4e-22 109.8 96 58.3
CAN.G1492.8 Capsicum annuum HOM05D000070 ORTHO05D007395 1.8e-22 109.4 81 67.9
MELO3C016047.2 Cucumis melo HOM05D000070 ORTHO05D007395 1.8e-22 109.4 77 68.8
CsaV3_7G028910 Cucumis sativus L. HOM05D000070 ORTHO05D007395 1.8e-22 109.4 80 66.2
Nn3g18628 Nelumbo nucifera HOM05D000070 ORTHO05D007395 2.3e-22 109.0 81 70.4
TWI23G0155 Tripterygium wilfordii HOM05D000070 ORTHO05D007395 3.9e-22 108.2 81 70.4
Ca_08375_v3 Cicer arietinum L. HOM05D000070 ORTHO05D007395 1.1e-21 106.7 81 69.1
Aa31LG1G9580 Aethionema arabicum HOM05D000070 ORTHO05D007395 1.5e-21 106.3 87 63.2
Sed0017243 Sechium edule HOM05D000070 ORTHO05D007395 1.5e-21 106.3 80 68.8
Ah.14g089610 Amaranthus hybridus HOM05D000070 ORTHO05D007395 2.0e-21 105.9 81 67.9
unitig_0.g1183 Utricularia gibba HOM05D000070 ORTHO05D007395 2.6e-21 105.5 83 65.1
Sabra14G0099300 Salix brachista HOM05D000070 ORTHO05D007395 3.3e-21 105.1 81 65.4
SGA_v2.0_scaffold1G00391 Striga asiatica HOM05D000161 ORTHO05D007395 5.7e-21 104.4 77 70.1
THA.LOC104825979 Tarenaya hassleriana HOM05D000070 ORTHO05D007395 5.7e-21 104.4 83 65.1
Aqoxy1G01462 Aquilegia oxysepala HOM05D000070 ORTHO05D007395 7.4e-21 104.0 81 61.7
Sp1g01990 Schrenkiella parvula HOM05D000070 ORTHO05D007395 7.4e-21 104.0 84 64.3
BcaC07g42283 Brassica carinata HOM05D000070 ORTHO05D007395 1.3e-20 103.2 85 63.5
Zm00001eb431070 Zea mays HOM05D000070 ORTHO05D007395 4.8e-20 101.3 82 58.5
AL1G12450 Arabidopsis lyrata HOM05D000070 ORTHO05D007395 6.3e-20 100.9 87 64.4
AT1G03000 Arabidopsis thaliana HOM05D000070 ORTHO05D007395 6.3e-20 100.9 85 62.4
CARHR002330 Cardamine hirsuta HOM05D000070 ORTHO05D007395 6.3e-20 100.9 84 61.9
TAR633G1234 Trochodendron aralioides HOM05D000070 ORTHO05D007395 6.3e-20 100.9 77 63.6
Carub.0001s0213 Capsella rubella HOM05D000070 ORTHO05D007395 8.2e-20 100.5 87 63.2
C08p53040 Brassica napus HOM05D000070 ORTHO05D007395 3.1e-19 98.6 85 61.2
BolC8t52818H Brassica oleracea HOM05D000070 ORTHO05D007395 3.1e-19 98.6 85 61.2
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 3.1e-19 98.6 78 64.1
BraA09t42179Z Brassica rapa HOM05D001550 ORTHO05D007395 4.1e-19 98.2 79 64.6
PSO063G2232 Papaver somniferum HOM05D000070 ORTHO05D007395 4.1e-19 98.2 77 63.6
PSO782G5086 Papaver somniferum HOM05D000070 ORTHO05D007395 4.1e-19 98.2 77 63.6
ATR0763G110 Amborella trichopoda HOM05D000070 ORTHO05D007395 5.3e-19 97.8 81 60.5
Nitab4.5_0005696g0050 Nicotiana tabacum HOM05D000070 ORTHO05D007395 6.9e-19 97.4 54 87.0
Os04g0617600 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D007395 6.9e-19 97.4 104 49.0
HPP92_016677 Vanilla planifolia HOM05D000070 ORTHO05D007395 1.5e-18 96.3 80 60.0
Nitab4.5_0000627g0010 Nicotiana tabacum HOM05D000070 ORTHO05D007395 5.9e-18 94.4 54 85.2
Lj1A204T31 Lonicera japonica HOM05D000070 ORTHO05D007395 7.7e-18 94.0 48 85.4
Thhalv10006717m.g Eutrema salsugineum HOM05D000070 ORTHO05D007395 1.4e-16 89.7 53 79.2
A09p68430 Brassica napus HOM05D001550 ORTHO05D007395 3.2e-16 88.6 56 75.0
SEGI_16067 Sequoiadendron giganteum HOM05D000070 ORTHO05D007395 5.5e-16 87.8 87 52.9
MBI02_g15928_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D007395 3.6e-15 85.1 53 71.7
SMO200G0083 Selaginella moellendorffii HOM05D000070 ORTHO05D007395 1.5e-13 79.7 88 51.1
Pp3c17_21090 Physcomitrium patens HOM05D000070 ORTHO05D007395 1.7e-12 76.3 80 51.2
AagrBONN_evm.TU.Sc2ySwM_368.410 Anthoceros agrestis HOM05D000070 ORTHO05D007395 2.8e-12 75.5 88 47.7
Mapoly0037s0036 Marchantia polymorpha HOM05D000070 ORTHO05D007395 8.2e-12 73.9 100 42.0
CBR_g36373 Chara braunii HOM05D000070 ORTHO05D007395 2.4e-11 72.4 49 65.3
A10p01620 Brassica napus HOM05D001550 ORTHO05D007395 7.0e-11 70.9 46 76.1
PRCOL_00004518 Prasinoderma coloniale HOM05D000070 ORTHO05D007395 1.7e-09 66.2 48 60.4
Lsat_1_v5_gn_3_85040 Lactuca sativa HOM05D000070 ORTHO05D007395 1.5e-08 63.2 45 68.9
Cre10.g446250 Chlamydomonas reinhardtii HOM05D000070 ORTHO05D007395 3.6e-07 58.5 54 48.1
Zm00001eb072100 Zea mays HOM05D000070 ORTHO05D007395 6.1e-07 57.8 82 42.7
MCO13G338 Micromonas commoda HOM05D000070 ORTHO05D007395 1.8e-06 56.2 54 53.7


User provided reference genes

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