Gene: Sopen06g003520

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g003520
  • Transcript Identifier Sopen06g003520.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 2935042-2943038 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g003520.1

Descriptions

  • Description Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import. | peroxin 6 (PEX6) | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding | INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core , ATPase, AAA type, core , ATPase, AAA-type, conserved site | BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016558
ISO
PLAZA Integrative Orthologyprotein import into peroxisome matrix AT1G03000
GO:0006635
ISO
PLAZA Integrative Orthologyfatty acid beta-oxidation AT1G03000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G03000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
Mapman id Description
23.4.1.5.1.2 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.component Pex6