Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0552251 Helianthus annuus HOM05D002984 ORTHO05D003561 3.8e-134 481.5 243 100.0
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 8.8e-62 241.1 236 55.9
SGA_v2.0_scaffold14G06838 Striga asiatica HOM05D002984 ORTHO05D003561 1.1e-48 197.6 275 42.9
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 9.7e-45 184.5 295 40.7
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 1.4e-43 180.6 500 30.2
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 1.8e-43 180.3 367 35.4
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 2.4e-43 179.9 520 29.8
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 5.3e-43 178.7 521 29.8
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 5.3e-43 178.7 509 30.1
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 9.1e-43 177.9 505 29.9
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.2e-42 177.6 527 29.0
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.2e-42 177.6 527 29.0
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 1.6e-42 177.2 492 30.7
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 1.6e-42 177.2 505 29.9
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.0e-42 176.8 289 39.4
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 2.0e-42 176.8 529 28.4
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 2.0e-42 176.8 522 28.7
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 3.5e-42 176.0 498 29.7
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 3.5e-42 176.0 475 30.3
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 4.5e-42 175.6 518 29.3
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 4.5e-42 175.6 534 28.7
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 5.9e-42 175.3 528 29.5
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 7.7e-42 174.9 527 28.1
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 1.0e-41 174.5 510 30.2
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.3e-41 174.1 527 28.5
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 1.3e-41 174.1 500 30.0
Sopen05g005530 Solanum pennellii HOM05D002984 ORTHO05D003561 1.3e-41 174.1 273 39.9
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 2.2e-41 173.3 522 28.9
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 2.2e-41 173.3 526 28.3
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 3.8e-41 172.6 514 29.8
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 3.8e-41 172.6 507 29.0
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 6.5e-41 171.8 513 28.5
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 1.1e-40 171.0 514 28.4
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 1.1e-40 171.0 533 27.6
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 1.5e-40 170.6 528 28.6
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 1.5e-40 170.6 523 28.3
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.5e-40 170.6 515 28.3
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 1.9e-40 170.2 525 28.4
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 2.5e-40 169.9 148 58.1
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 2.5e-40 169.9 520 28.7
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 2.5e-40 169.9 484 31.0
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 2.5e-40 169.9 509 29.5
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 3.2e-40 169.5 514 28.4
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 4.2e-40 169.1 506 28.1
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 4.2e-40 169.1 506 28.1
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 4.2e-40 169.1 516 28.7
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 5.5e-40 168.7 525 28.8
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 5.5e-40 168.7 526 27.9
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 9.4e-40 167.9 293 37.5
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 2.1e-39 166.8 133 60.2
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.1e-39 166.8 293 37.5
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 2.7e-39 166.4 167 52.7
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 3.6e-39 166.0 526 27.6
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 3.6e-39 166.0 519 28.1
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 3.6e-39 166.0 525 28.0
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 4.7e-39 165.6 509 27.9
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 6.1e-39 165.2 509 27.7
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 6.1e-39 165.2 517 28.4
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 8.0e-39 164.9 513 28.1
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 8.0e-39 164.9 513 27.9
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 8.0e-39 164.9 513 27.9
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.0e-38 164.5 511 28.8
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 1.8e-38 163.7 133 60.2
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 2.3e-38 163.3 519 28.5
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 2.3e-38 163.3 513 28.1
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 3.0e-38 162.9 509 27.7
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 3.0e-38 162.9 167 52.1
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 3.0e-38 162.9 530 27.7
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 4.0e-38 162.5 343 36.2
Solyc05g009710.4 Solanum lycopersicum HOM05D002984 ORTHO05D003561 4.0e-38 162.5 248 40.7
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 5.2e-38 162.2 540 28.9
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 5.2e-38 162.2 161 53.4
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 1.2e-37 161.0 148 56.8
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 1.2e-37 161.0 164 51.8
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 1.5e-37 160.6 164 51.8
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 2.0e-37 160.2 513 27.9
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 2.0e-37 160.2 133 58.6
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 2.0e-37 160.2 539 26.9
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 3.4e-37 159.5 133 58.6
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 3.4e-37 159.5 155 54.8
BcaB03g12090 Brassica carinata HOM05D002984 ORTHO05D003561 4.4e-37 159.1 133 57.9
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 7.5e-37 158.3 517 28.4
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 9.7e-37 157.9 518 28.4
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 9.7e-37 157.9 124 61.3
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 1.7e-36 157.1 149 53.0
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 1.7e-36 157.1 168 50.6
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 1.7e-36 157.1 168 50.6
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.7e-36 157.1 312 35.6
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 2.2e-36 156.8 146 55.5
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 2.2e-36 156.8 510 28.0
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 2.8e-36 156.4 478 27.8
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 3.7e-36 156.0 141 56.0
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 3.7e-36 156.0 143 53.8
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 4.8e-36 155.6 515 28.2
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 6.3e-36 155.2 521 28.0
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 8.3e-36 154.8 137 57.7
ECA246G1507 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.1e-35 154.5 238 41.2
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.1e-35 154.5 516 27.5
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.1e-35 154.5 516 27.5
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 1.4e-35 154.1 142 52.8
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 1.8e-35 153.7 501 27.9
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 1.8e-35 153.7 183 47.5
PSO017G3087 Papaver somniferum HOM05D002984 ORTHO05D003561 4.1e-35 152.5 150 52.0
CSS0024955 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 5.3e-35 152.1 150 55.3
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 2.0e-34 150.2 243 40.3
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 1.3e-33 147.5 482 29.3
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 3.8e-33 146.0 157 49.0
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 6.5e-33 145.2 498 27.3
CDE08G0495 Ceratophyllum demersum HOM05D002984 ORTHO05D003561 1.5e-32 144.1 169 45.6
Dinv04490 Davidia involucrata HOM05D002984 ORTHO05D003561 1.5e-32 144.1 113 61.9
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 1.9e-32 143.7 113 59.3
BcaC05g26654 Brassica carinata HOM05D002984 ORTHO05D003561 4.2e-32 142.5 126 54.8
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 3.6e-31 139.4 184 44.6
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 4.7e-31 139.0 157 48.4
Psat7g129560 Pisum sativum HOM05D002984 ORTHO05D003561 8.0e-31 138.3 192 42.7
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 8.0e-31 138.3 496 26.0
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 1.8e-30 137.1 504 27.6
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 4.0e-30 136.0 122 54.1
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 4.4e-29 132.5 491 26.3
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 5.7e-29 132.1 476 27.3
Zm00001eb115900 Zea mays HOM05D000554 ORTHO05D000860 9.8e-29 131.3 124 51.6
Medtr5g054690 Medicago truncatula HOM05D002984 ORTHO05D003561 2.2e-28 130.2 128 50.8
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 1.4e-27 127.5 157 48.4
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 1.8e-27 127.1 116 61.2
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 3.1e-27 126.3 157 46.5
Rhsim09G0111200 Rhododendron simsii HOM05D002984 ORTHO05D000550 2.7e-26 123.2 117 53.8
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 4.5e-26 122.5 143 52.4
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.3e-25 120.9 141 51.1
ECA246G2084 Erigeron canadensis HOM05D002984 ORTHO05D003561 2.9e-25 119.8 316 30.4
Nitab4.5_0000672g0090 Nicotiana tabacum HOM05D002984 ORTHO05D003561 2.9e-25 119.8 167 42.5
FvH4_5g01900 Fragaria vesca HOM05D002984 ORTHO05D003561 6.6e-25 118.6 133 48.1
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 6.6e-25 118.6 152 48.7
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.1e-24 117.9 143 51.7
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 1.9e-24 117.1 144 50.0
Lj2g0014050 Lotus japonicus HOM05D002984 ORTHO05D003561 1.9e-24 117.1 126 48.4
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 5.5e-24 115.5 140 52.1
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.4e-22 110.9 136 47.8
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 5.2e-22 109.0 143 45.5
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 6.8e-22 108.6 142 46.5
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 6.8e-22 108.6 152 45.4
Oeu041887.1 Olea europaea HOM05D002984 ORTHO05D003561 1.2e-21 107.8 157 43.3
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 1.5e-21 107.5 144 45.1
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 3.4e-21 106.3 134 49.3
Nitab4.5_0000597g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 4.4e-21 105.9 158 44.9
CAN.G674.44 Capsicum annuum HOM05D002984 ORTHO05D003561 7.5e-21 105.1 137 46.0
PGSC0003DMG401000817 Solanum tuberosum HOM05D002984 ORTHO05D003561 9.8e-21 104.8 170 40.0
SMO356G0715 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 1.4e-19 100.9 418 25.1
MBI01_g32855_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 4.1e-19 99.4 76 68.4
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 5.4e-19 99.0 252 30.6
Medtr7g077950 Medicago truncatula HOM05D002984 ORTHO05D003561 1.2e-18 97.8 129 41.9
FAN03G1604 Fragaria x ananassa HOM05D002984 ORTHO05D003561 7.8e-18 95.1 75 62.7
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.0e-17 94.7 133 45.9
Lj2g0024103 Lotus japonicus HOM05D002984 ORTHO05D003561 1.3e-17 94.4 140 45.0
SHI14503 Sapria himalayana HOM05D002984 ORTHO05D003561 5.0e-17 92.4 109 44.0
SEGI_39906 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 8.6e-17 91.7 79 54.4
FAN13G3281 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.3e-16 89.7 121 41.3
Lj2g0022832 Lotus japonicus HOM05D002984 ORTHO05D003561 3.3e-16 89.7 135 45.9
Psat3g000280 Pisum sativum HOM05D002984 ORTHO05D005363 5.6e-16 89.0 91 56.0
Sc04g0003680 Simmondsia chinensis HOM05D002984 ORTHO05D003561 1.6e-15 87.4 131 37.4
Glyma.01G086600 Glycine max HOM05D002984 ORTHO05D003561 2.1e-15 87.0 70 65.7
Psat2g101040 Pisum sativum HOM05D002984 ORTHO05D003561 2.1e-15 87.0 141 44.0
VMungo0464G0516 Vigna mungo HOM05D002984 ORTHO05D003561 2.1e-15 87.0 98 41.8
SEGI_05160 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 4.7e-15 85.9 74 56.8
Glyma.02G098500 Glycine max HOM05D002984 ORTHO05D003561 1.8e-14 84.0 72 61.1
Dinv40427 Davidia involucrata HOM05D002984 ORTHO05D003561 4.0e-14 82.8 71 59.2
CSS0008826 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 5.2e-14 82.4 119 42.0
FAN25G0819 Fragaria x ananassa HOM05D002984 ORTHO05D009683 1.2e-13 81.3 60 66.7
MBI15_g33904_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 4.1e-11 72.8 51 62.7
Pp3c25_2430 Physcomitrium patens HOM05D002984 ORTHO05D003561 5.4e-11 72.4 73 54.8
Actinidia39817 Actinidia chinensis HOM05D002984 ORTHO05D003561 9.2e-11 71.6 85 36.5
QL10p023599 Quercus lobata HOM05D002984 ORTHO05D003561 1.6e-10 70.9 70 51.4
FAN13G1615 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.0e-09 66.6 83 47.0
FvH4_5g12610 Fragaria vesca HOM05D002984 ORTHO05D003561 1.9e-08 63.9 83 45.8
FAN18G0496 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.9e-08 63.9 83 45.8
FAN18G2176 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.9e-08 63.9 83 45.8
Nitab4.5_0000672g0110 Nicotiana tabacum HOM05D002984 ORTHO05D003561 2.5e-08 63.5 39 79.5
FAN04G1620 Fragaria x ananassa HOM05D002984 ORTHO05D003561 5.6e-08 62.4 83 44.6
FAN10G3298 Fragaria x ananassa HOM05D002984 ORTHO05D003561 9.5e-08 61.6 37 83.8
RcHm_v2.0_Chr7g0240991 Rosa chinensis HOM05D002984 ORTHO05D003561 2.1e-07 60.5 41 65.9
CAN.G2.30 Capsicum annuum HOM05D002984 ORTHO05D003561 2.8e-07 60.1 40 72.5
Glyma.17G171600 Glycine max HOM05D013640 ORTHO05D014229 1.1e-06 58.2 123 30.1
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 1.4e-06 57.8 117 33.3
ECA238G1450 Erigeron canadensis HOM05D000218 ORTHO05D000125 1.8e-06 57.4 63 50.8
Glyma.02G139200 Glycine max HOM05D013640 ORTHO05D014229 2.3e-06 57.0 123 27.6
Glyma.20G031800 Glycine max HOM05D002984 ORTHO05D014229 5.2e-06 55.8 86 40.7
QL10p023587 Quercus lobata HOM05D002984 ORTHO05D014229 5.2e-06 55.8 82 37.8


User provided reference genes

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