Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 1.7e-163 579.3 310 100.0
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 2.2e-158 562.4 302 98.7
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 1.7e-139 499.6 303 83.8
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 8.6e-139 497.3 284 87.7
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 1.5e-138 496.5 304 81.2
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 5.6e-138 494.6 304 80.6
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 9.9e-135 483.8 305 79.3
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 1.1e-133 480.3 287 82.9
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 1.7e-131 473.0 297 80.8
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 1.7e-131 473.0 301 78.7
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 1.7e-131 473.0 305 76.7
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 3.0e-131 472.2 302 79.1
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 1.1e-130 470.3 305 76.7
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.6e-129 466.5 305 77.4
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 1.6e-129 466.5 306 76.8
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 2.1e-129 466.1 306 76.8
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 6.2e-129 464.5 307 76.9
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.1e-128 463.8 305 76.4
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 1.8e-128 463.0 306 76.5
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.4e-128 462.6 304 75.7
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 3.1e-128 462.2 309 77.3
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 6.9e-128 461.1 301 75.7
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 9.0e-128 460.7 305 76.4
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 9.0e-128 460.7 305 76.4
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.2e-127 460.3 303 75.6
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.2e-127 460.3 305 76.1
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.2e-127 460.3 305 74.8
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 1.5e-127 459.9 305 76.4
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 2.6e-127 459.1 305 76.4
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 4.5e-127 458.4 306 75.8
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 5.8e-127 458.0 303 74.6
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 7.6e-127 457.6 305 74.8
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 7.6e-127 457.6 305 76.4
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 7.6e-127 457.6 306 74.2
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 1.3e-126 456.8 301 75.4
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 1.3e-126 456.8 305 75.4
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 2.2e-126 456.1 304 74.3
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 2.9e-126 455.7 303 73.9
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 2.9e-126 455.7 304 74.7
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 3.8e-126 455.3 305 74.4
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 4.9e-126 454.9 304 75.7
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 4.9e-126 454.9 301 74.1
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 8.4e-126 454.1 304 74.0
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 3.2e-125 452.2 324 71.6
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 5.4e-125 451.4 303 73.9
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 9.3e-125 450.7 303 74.6
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 9.3e-125 450.7 303 73.9
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 9.3e-125 450.7 304 74.0
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 1.2e-124 450.3 305 74.4
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.2e-124 450.3 293 77.1
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 1.2e-124 450.3 305 74.4
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 1.6e-124 449.9 302 74.2
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 1.6e-124 449.9 303 72.3
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 1.6e-124 449.9 303 74.6
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.7e-124 449.1 304 73.7
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 2.7e-124 449.1 305 72.5
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 3.5e-124 448.7 305 72.8
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 1.3e-123 446.8 301 74.1
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 1.3e-123 446.8 303 73.6
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.3e-123 446.8 305 73.4
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 1.8e-123 446.4 303 72.9
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 3.9e-123 445.3 289 74.7
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 6.7e-123 444.5 304 71.7
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 1.1e-122 443.7 304 73.0
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 1.5e-122 443.4 303 71.9
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 5.6e-122 441.4 299 72.9
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 3.7e-121 438.7 303 71.9
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.1e-120 437.2 304 74.0
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 1.8e-120 436.4 330 68.2
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 1.8e-120 436.4 302 72.5
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 5.3e-120 434.9 303 72.3
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 6.9e-120 434.5 302 72.5
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.0e-119 433.0 302 70.9
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.6e-119 432.6 302 70.5
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 2.6e-119 432.6 297 74.4
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 2.9e-118 429.1 305 71.8
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 3.8e-118 428.7 305 69.8
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 3.8e-118 428.7 305 69.8
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 6.4e-118 427.9 302 70.5
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 6.4e-118 427.9 305 72.1
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 1.9e-117 426.4 305 69.5
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 1.9e-117 426.4 305 69.5
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 1.9e-117 426.4 304 71.1
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 1.9e-117 426.4 304 69.1
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 1.9e-117 426.4 318 67.6
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.9e-117 426.4 318 67.6
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.9e-117 426.4 318 67.6
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 1.9e-117 426.4 305 71.5
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 4.2e-117 425.2 305 69.8
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 4.2e-117 425.2 305 69.2
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 4.2e-117 425.2 310 70.0
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 1.2e-116 423.7 283 72.4
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 3.5e-116 422.2 318 66.7
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 4.6e-116 421.8 291 70.4
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 6.0e-116 421.4 289 71.3
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 1.3e-115 420.2 289 71.3
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.3e-115 420.2 305 68.9
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 2.3e-115 419.5 305 67.9
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 3.0e-115 419.1 289 70.9
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 3.9e-115 418.7 289 70.6
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 3.9e-115 418.7 289 70.6
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 3.9e-115 418.7 318 66.7
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 8.7e-115 417.5 328 65.5
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 3.3e-114 415.6 308 67.9
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 2.1e-113 412.9 303 68.6
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 2.8e-113 412.5 305 68.9
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 3.7e-113 412.1 305 70.5
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 3.1e-112 409.1 304 66.8
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 3.1e-112 409.1 304 66.8
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 8.4e-110 401.0 300 67.3
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.4e-109 400.2 304 66.1
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.1e-108 396.4 233 82.0
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 4.6e-108 395.2 305 66.2
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 4.6e-108 395.2 281 69.0
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 1.3e-107 393.7 268 70.5
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 1.3e-107 393.7 308 65.6
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.3e-105 384.8 233 78.5
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.1e-104 384.0 319 65.5
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 3.3e-98 362.5 297 64.6
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.2e-92 344.0 304 61.2
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.4e-90 335.5 298 57.0
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 6.3e-89 331.6 239 71.5
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.2e-87 327.4 231 69.7
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 1.0e-86 324.3 310 54.8
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.4e-83 313.9 222 70.3
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.4e-80 303.9 307 53.1
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 5.3e-80 302.0 266 61.3
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 1.0e-78 297.7 297 51.9
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 1.0e-78 297.7 304 53.0
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 7.7e-71 271.6 275 52.0
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 6.8e-67 258.5 298 46.6
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 1.2e-63 247.7 230 59.1
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 2.0e-63 246.9 286 47.6
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 1.7e-62 243.8 185 74.1
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 3.0e-46 189.9 299 39.1
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 3.4e-34 149.8 104 70.2
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 2.3e-30 137.1 83 79.5
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 3.3e-29 133.3 84 76.2
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 1.5e-26 124.4 81 76.5
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 6.6e-22 109.0 69 76.8
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 2.9e-17 93.6 80 65.0
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 2.9e-17 93.6 80 65.0
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 1.3e-14 84.7 116 45.7
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 1.1e-11 75.1 80 55.0
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 8.4e-09 65.5 98 44.9


User provided reference genes

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