Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 3.1e-243 844.7 440 100.0
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 8.4e-180 634.0 436 77.5
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 6.1e-154 548.1 328 83.8
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 8.2e-143 511.1 374 69.3
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.1e-142 510.8 382 68.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 3.1e-142 509.2 449 60.4
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.7e-138 495.4 380 67.6
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 1.8e-137 493.4 429 61.1
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 3.9e-137 492.3 396 65.7
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 3.9e-137 492.3 430 60.5
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 5.2e-137 491.9 372 67.7
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 7.4e-136 488.0 374 65.8
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 2.4e-134 483.0 359 68.8
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.1e-134 482.6 375 64.5
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 7.0e-134 481.5 371 67.9
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 1.2e-133 480.7 371 67.4
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.3e-132 477.2 374 65.2
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.7e-132 476.9 375 64.3
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.7e-132 476.9 366 67.5
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 2.9e-132 476.1 443 58.7
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.0e-132 475.3 366 67.2
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 7.2e-131 471.5 366 66.9
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 6.1e-130 468.4 430 59.8
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 4.0e-129 465.7 519 52.4
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 5.2e-129 465.3 343 70.8
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.2e-128 464.2 363 65.0
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 1.2e-128 464.2 376 65.2
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 1.5e-128 463.8 406 60.8
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.0e-128 463.4 377 65.3
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 3.4e-128 462.6 370 64.6
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 5.7e-128 461.8 348 69.3
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.3e-127 460.7 370 63.2
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.7e-127 460.3 376 64.6
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 3.7e-127 459.1 375 63.5
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.8e-126 456.8 373 64.9
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 3.1e-126 456.1 373 63.8
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 3.1e-126 456.1 437 57.2
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 4.1e-126 455.7 381 61.2
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 4.1e-126 455.7 374 65.5
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 4.1e-126 455.7 375 64.0
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.3e-126 455.3 437 56.8
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 5.3e-126 455.3 374 62.6
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 9.1e-126 454.5 374 62.0
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 9.1e-126 454.5 371 64.2
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.2e-125 454.1 356 65.7
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.2e-125 454.1 342 66.7
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 3.5e-125 452.6 373 65.1
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.0e-124 451.1 437 56.5
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.7e-124 450.3 363 64.7
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 3.8e-124 449.1 341 67.2
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.8e-124 449.1 445 56.6
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 8.5e-124 448.0 359 65.2
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 8.5e-124 448.0 394 61.7
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.1e-123 447.6 375 63.7
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.1e-123 447.6 369 63.1
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.9e-123 446.8 338 67.2
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 2.5e-123 446.4 423 57.2
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 5.5e-123 445.3 367 61.9
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 5.5e-123 445.3 341 66.6
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.6e-122 443.7 370 63.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.6e-122 443.7 359 62.7
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 8.0e-122 441.4 372 61.8
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 8.0e-122 441.4 442 56.6
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.8e-121 440.3 371 62.0
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 4.0e-121 439.1 385 60.0
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 4.0e-121 439.1 436 55.3
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 6.8e-121 438.3 371 61.7
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 2.6e-120 436.4 331 66.5
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 3.4e-120 436.0 338 66.0
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 1.3e-119 434.1 372 61.0
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.3e-119 434.1 371 60.6
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.3e-119 434.1 373 60.9
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 1.3e-119 434.1 386 60.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.3e-119 434.1 369 61.8
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.7e-119 433.7 346 65.3
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 8.3e-119 431.4 373 60.9
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.4e-118 430.6 365 60.0
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 4.1e-118 429.1 381 59.6
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 5.4e-118 428.7 347 63.1
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 5.4e-118 428.7 383 59.8
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 7.0e-118 428.3 309 71.8
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 9.1e-118 427.9 328 66.8
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.0e-117 426.8 369 60.7
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 3.5e-117 426.0 365 59.7
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 3.5e-117 426.0 345 63.5
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.3e-116 424.1 347 63.1
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.3e-116 423.3 386 58.3
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 5.5e-115 418.7 350 60.9
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.2e-115 418.3 342 64.3
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.2e-114 417.5 368 60.6
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 5.7e-112 408.7 338 61.5
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 1.9e-107 393.7 296 66.9
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 3.6e-98 362.8 377 52.5
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 6.0e-93 345.5 372 52.7
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 3.3e-91 339.7 406 47.0
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 3.3e-91 339.7 362 50.0
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.2e-85 321.2 239 68.6
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 8.6e-84 315.1 238 67.6
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 2.6e-80 303.5 227 68.7
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.4e-73 281.2 211 68.7
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 7.6e-72 275.4 338 46.4
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 7.6e-72 275.4 356 45.8
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 2.1e-69 267.3 211 66.8
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 5.6e-67 259.2 335 42.4
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.3e-66 258.1 201 67.7
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.5e-61 240.0 349 41.8
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 6.7e-60 235.7 226 53.1
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 6.5e-47 192.6 177 58.2
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 5.9e-40 169.5 184 53.3
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.7e-31 141.4 247 38.1
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 8.8e-28 129.0 73 84.9
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 4.5e-24 116.7 94 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.6e-21 108.2 116 50.9
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.6e-21 108.2 103 57.3
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 3.3e-19 100.5 110 50.9
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 4.1e-17 93.6 338 27.5
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 5.3e-17 93.2 150 44.0
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.7e-16 90.9 341 27.3
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 5.0e-15 86.7 132 40.2
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 3.1e-09 67.4 36 83.3


User provided reference genes

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