Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0507711 Helianthus annuus HOM05D002270 ORTHO05D002866 2.1e-88 328.9 158 100.0
HanXRQChr14g0434531 Helianthus annuus HOM05D002270 ORTHO05D002866 2.3e-63 245.7 121 96.7
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 2.6e-14 82.8 70 57.1
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 7.5e-14 81.3 56 66.1
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.9e-13 79.3 59 61.0
Cpa.g.sc30.6 Carica papaya HOM05D002270 ORTHO05D002866 1.6e-11 73.6 64 50.0
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 3.5e-11 72.4 131 37.4
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 4.6e-11 72.0 64 51.6
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 4.6e-11 72.0 64 51.6
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 1.3e-10 70.5 64 50.0
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 3.0e-10 69.3 98 38.8
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 3.9e-10 68.9 64 48.4
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 6.6e-10 68.2 50 60.0
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 6.6e-10 68.2 63 46.0
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.5e-09 67.0 50 58.0
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 1.5e-09 67.0 56 53.6
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.5e-09 67.0 64 56.2
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.9e-09 66.6 77 46.8
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 2.5e-09 66.2 64 48.4
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 2.5e-09 66.2 64 56.2
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 2.5e-09 66.2 64 46.9
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 3.3e-09 65.9 64 48.4
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 3.3e-09 65.9 64 48.4
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 3.3e-09 65.9 51 56.9
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 3.3e-09 65.9 51 56.9
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 5.6e-09 65.1 64 48.4
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 5.6e-09 65.1 63 46.0
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 5.6e-09 65.1 64 48.4
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 5.6e-09 65.1 64 48.4
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 5.6e-09 65.1 64 48.4
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 7.3e-09 64.7 65 47.7
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 7.3e-09 64.7 49 55.1
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 7.3e-09 64.7 64 45.3
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 9.5e-09 64.3 60 48.3
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 9.5e-09 64.3 64 45.3
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 1.2e-08 63.9 64 48.4
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 1.2e-08 63.9 64 48.4
BolC5t32597H Brassica oleracea HOM05D002270 ORTHO05D002866 1.2e-08 63.9 64 48.4
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 2.1e-08 63.2 49 53.1
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.8e-08 62.8 76 39.5
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 2.8e-08 62.8 51 52.9
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.8e-08 62.8 77 41.6
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.8e-08 62.8 58 46.6
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 2.8e-08 62.8 51 51.0
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 3.6e-08 62.4 50 54.0
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 3.6e-08 62.4 77 41.6
QL01p054541 Quercus lobata HOM05D002270 ORTHO05D002866 3.6e-08 62.4 57 49.1
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 3.6e-08 62.4 57 49.1
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 4.7e-08 62.0 73 42.5
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 6.2e-08 61.6 64 45.3
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.2e-08 61.6 77 40.3
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 8.1e-08 61.2 51 54.9
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.1e-07 60.8 51 51.0
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 1.1e-07 60.8 64 48.4
ECA067G0001 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.1e-07 60.8 61 50.8
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 1.4e-07 60.5 56 44.6
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 1.4e-07 60.5 73 45.2
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.4e-07 60.5 51 51.0
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.8e-07 60.1 73 45.2
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 3.1e-07 59.3 64 42.2
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 4.0e-07 58.9 51 51.0
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 4.0e-07 58.9 63 44.4
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 6.8e-07 58.2 61 45.9
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 8.9e-07 57.8 67 43.3
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.2e-06 57.4 75 42.7
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.5e-06 57.0 69 46.4
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.5e-06 57.0 69 46.4
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.0e-06 56.6 60 45.0
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 2.6e-06 56.2 49 51.0
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.6e-06 56.2 49 42.9
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.4e-06 55.8 69 44.9
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 4.4e-06 55.5 49 44.9
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 7.6e-06 54.7 64 40.6
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 7.6e-06 54.7 55 47.3
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 7.6e-06 54.7 75 38.7
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 7.6e-06 54.7 51 45.1
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 9.9e-06 54.3 82 32.9


User provided reference genes

Program Settings